RNA–Protein interactions for RNA: ENST00000497638.2

VPS45-210, Transcript of vacuolar protein sorting 45 homolog, humanhuman

TSL 2

Gene VPS45, Length 1,135 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45-210ENST00000497638 KLHL36Q8N4N3 616 aa7.54□□□□□ -1.2
VPS45-210ENST00000497638 ZNF397Q8NF99 534 aaPredicted RBP7.54□□□□□ -1.2
VPS45-210ENST00000497638 CCL4L1Q8NHW4 92 aa7.54□□□□□ -1.2
VPS45-210ENST00000497638 HCAR2Q8TDS4 363 aa7.54□□□□□ -1.2
VPS45-210ENST00000497638 PDCD6IPQ8WUM4 868 aaKnown RBP7.54□□□□□ -1.2
VPS45-210ENST00000497638 CASKIN2Q8WXE0 1202 aa7.54□□□□□ -1.2
VPS45-210ENST00000497638 PGAP3Q96FM1 320 aaPredicted RBP7.54□□□□□ -1.2
VPS45-210ENST00000497638 HMCESQ96FZ2 354 aa7.54□□□□□ -1.2
VPS45-210ENST00000497638 NPY6RQ99463 290 aa7.54□□□□□ -1.2
VPS45-210ENST00000497638 CTRCQ99895 268 aa7.54□□□□□ -1.2
VPS45-210ENST00000497638 JAM3Q9BX67 310 aa7.54□□□□□ -1.2
VPS45-210ENST00000497638 TTYH3Q9C0H2 523 aa7.54□□□□□ -1.2
VPS45-210ENST00000497638 KLC2Q9H0B6 622 aa7.54□□□□□ -1.2
VPS45-210ENST00000497638 RETREG1Q9H6L5 497 aa7.54□□□□□ -1.2
VPS45-210ENST00000497638 WDR26Q9H7D7 661 aa7.54□□□□□ -1.2
VPS45-210ENST00000497638 MRPL40Q9NQ50 206 aaKnown RBP7.54□□□□□ -1.2
VPS45-210ENST00000497638 ANLNQ9NQW6 1124 aa7.54□□□□□ -1.2
VPS45-210ENST00000497638 TRNAU1APQ9NX07 287 aaKnown RBP7.54□□□□□ -1.2
VPS45-210ENST00000497638 TMEM9Q9P0T7 183 aa7.54□□□□□ -1.2
VPS45-210ENST00000497638 TAAR2Q9P1P5 351 aa7.54□□□□□ -1.2
VPS45-210ENST00000497638 MOSPD1Q9UJG1 213 aa7.54□□□□□ -1.2
VPS45-210ENST00000497638 KCND3Q9UK17 655 aa7.54□□□□□ -1.2
VPS45-210ENST00000497638 STAP1Q9ULZ2 295 aa7.54□□□□□ -1.2
VPS45-210ENST00000497638 HPCAL4Q9UM19 191 aa7.54□□□□□ -1.2
VPS45-210ENST00000497638 ENTPD4Q9Y227 616 aa7.54□□□□□ -1.2
VPS45-210ENST00000497638 SNX10Q9Y5X0 201 aa7.54□□□□□ -1.2
VPS45-210ENST00000497638 ACTL7AQ9Y615 435 aa7.54□□□□□ -1.2
VPS45-210ENST00000497638 SVILO95425 2214 aa7.54□□□□□ -1.2
VPS45-210ENST00000497638 POLR1CO15160 346 aaPredicted RBP7.53□□□□□ -1.2
VPS45-210ENST00000497638 P4HA2O15460 535 aa7.53□□□□□ -1.2
VPS45-210ENST00000497638 GPR42O15529 346 aa7.53□□□□□ -1.2
VPS45-210ENST00000497638 THAP12O43422 761 aa7.53□□□□□ -1.2
VPS45-210ENST00000497638 SRGAP2O75044 1071 aa7.53□□□□□ -1.2
VPS45-210ENST00000497638 TMCC1O94876 653 aa7.53□□□□□ -1.2
VPS45-210ENST00000497638 LETM1O95202 739 aaPredicted RBP7.53□□□□□ -1.2
VPS45-210ENST00000497638 F8A1P23610 371 aa7.53□□□□□ -1.2
VPS45-210ENST00000497638 TRIM23P36406 574 aa7.53□□□□□ -1.2
VPS45-210ENST00000497638 ACVRL1P37023 503 aa7.53□□□□□ -1.2
VPS45-210ENST00000497638 MMP12P39900 470 aa7.53□□□□□ -1.2
VPS45-210ENST00000497638 FKBP3Q00688 224 aaKnown RBP7.53□□□□□ -1.2
VPS45-210ENST00000497638 DEUP1Q05D60 604 aa7.53□□□□□ -1.2
VPS45-210ENST00000497638 SEMA5AQ13591 1074 aa7.53□□□□□ -1.2
VPS45-210ENST00000497638 GRM3Q14832 879 aa7.53□□□□□ -1.2
VPS45-210ENST00000497638 UGP2Q16851 508 aa7.53□□□□□ -1.2
VPS45-210ENST00000497638 ZRANB3Q5FWF4 1079 aa7.53□□□□□ -1.2
VPS45-210ENST00000497638 SLC35F1Q5T1Q4 408 aa7.53□□□□□ -1.2
VPS45-210ENST00000497638 ANKRD40Q6AI12 368 aa7.53□□□□□ -1.2
VPS45-210ENST00000497638 WDR74Q6RFH5 385 aaPredicted RBP7.53□□□□□ -1.2
VPS45-210ENST00000497638 FAM183BPQ6ZVS7 135 aa7.53□□□□□ -1.2
VPS45-210ENST00000497638 RRAGAQ7L523 313 aa7.53□□□□□ -1.2
VPS45-210ENST00000497638 NRROSQ86YC3 692 aa7.53□□□□□ -1.2
VPS45-210ENST00000497638 HPS6Q86YV9 775 aa7.53□□□□□ -1.2
VPS45-210ENST00000497638 NAGSQ8N159 534 aa7.53□□□□□ -1.2
VPS45-210ENST00000497638 PLA2G15Q8NCC3 412 aa7.53□□□□□ -1.2
VPS45-210ENST00000497638 OR10G6Q8NH81 332 aa7.53□□□□□ -1.2
VPS45-210ENST00000497638 ZNF606Q8WXB4 792 aa7.53□□□□□ -1.2
VPS45-210ENST00000497638 C1orf159Q96HA4 380 aa7.53□□□□□ -1.2
VPS45-210ENST00000497638 AHCYL2Q96HN2 611 aaKnown RBP7.53□□□□□ -1.2
VPS45-210ENST00000497638 CPXM1Q96SM3 734 aa7.53□□□□□ -1.2
VPS45-210ENST00000497638 TSG101Q99816 390 aa7.53□□□□□ -1.2
VPS45-210ENST00000497638 SLC25A23Q9BV35 468 aa7.53□□□□□ -1.2
VPS45-210ENST00000497638 TWSG1Q9GZX9 223 aa7.53□□□□□ -1.2
VPS45-210ENST00000497638 MAGEH1Q9H213 219 aa7.53□□□□□ -1.2
VPS45-210ENST00000497638 MLXIPLQ9NP71 852 aa7.53□□□□□ -1.2
VPS45-210ENST00000497638 PCDH12Q9NPG4 1184 aa7.53□□□□□ -1.2
VPS45-210ENST00000497638 RCOR3Q9P2K3 495 aaPredicted RBP7.53□□□□□ -1.2
VPS45-210ENST00000497638 PPARGC1AQ9UBK2 798 aaKnown RBP7.53□□□□□ -1.2
VPS45-210ENST00000497638 ASH2LQ9UBL3 628 aa7.53□□□□□ -1.2
VPS45-210ENST00000497638 ATP8A1Q9Y2Q0 1164 aa7.53□□□□□ -1.2
VPS45-210ENST00000497638 PCDHGA6Q9Y5G7 932 aa7.53□□□□□ -1.2
VPS45-210ENST00000497638 A6NCN8 305 aa7.52□□□□□ -1.21
VPS45-210ENST00000497638 PPM1DO15297 605 aa7.52□□□□□ -1.21
VPS45-210ENST00000497638 DPM1O60762 260 aa7.52□□□□□ -1.21
VPS45-210ENST00000497638 CREG1O75629 220 aa7.52□□□□□ -1.21
VPS45-210ENST00000497638 DNAJB5O75953 348 aa7.52□□□□□ -1.21
VPS45-210ENST00000497638 RECQL5O94762 991 aaPredicted RBP7.52□□□□□ -1.21
VPS45-210ENST00000497638 MYCLP1P12525 358 aaPredicted RBP7.52□□□□□ -1.21
VPS45-210ENST00000497638 PRF1P14222 555 aa7.52□□□□□ -1.21
VPS45-210ENST00000497638 PFKFB1P16118 471 aa7.52□□□□□ -1.21
VPS45-210ENST00000497638 ERCC5P28715 1186 aaPredicted RBP7.52□□□□□ -1.21
VPS45-210ENST00000497638 GDF5P43026 501 aa7.52□□□□□ -1.21
VPS45-210ENST00000497638 FASLGP48023 281 aa7.52□□□□□ -1.21
VPS45-210ENST00000497638 PPM1FP49593 454 aaPredicted RBP7.52□□□□□ -1.21
VPS45-210ENST00000497638 SULT1E1P49888 294 aa7.52□□□□□ -1.21
VPS45-210ENST00000497638 RHOAP61586 193 aa7.52□□□□□ -1.21
VPS45-210ENST00000497638 PPP2R2AP63151 447 aa7.52□□□□□ -1.21
VPS45-210ENST00000497638 SLC6A3Q01959 620 aa7.52□□□□□ -1.21
VPS45-210ENST00000497638 PRR30Q53SZ7 412 aaPredicted RBP7.52□□□□□ -1.21
VPS45-210ENST00000497638 CFAP58Q5T655 872 aa7.52□□□□□ -1.21
VPS45-210ENST00000497638 ATL3Q6DD88 541 aa7.52□□□□□ -1.21
VPS45-210ENST00000497638 VASNQ6EMK4 673 aa7.52□□□□□ -1.21
VPS45-210ENST00000497638 BRAT1Q6PJG6 821 aa7.52□□□□□ -1.21
VPS45-210ENST00000497638 SLC30A9Q6PML9 568 aa7.52□□□□□ -1.21
VPS45-210ENST00000497638 ZDHHC17Q8IUH5 632 aa7.52□□□□□ -1.21
VPS45-210ENST00000497638 ARHGEF19Q8IW93 802 aa7.52□□□□□ -1.21
VPS45-210ENST00000497638 PALM2Q8IXS6 379 aa7.52□□□□□ -1.21
VPS45-210ENST00000497638 C1orf131Q8NDD1 294 aaKnown RBP7.52□□□□□ -1.21
VPS45-210ENST00000497638 LMO3Q8TAP4 145 aa7.52□□□□□ -1.21
VPS45-210ENST00000497638 PATE1Q8WXA2 126 aa7.52□□□□□ -1.21
VPS45-210ENST00000497638 NT5C3BQ969T7 300 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms