RNA–Protein interactions for RNA: ENST00000497597.5

TRAPPC12-223, Transcript of trafficking protein particle complex 12, human

TSL 2

Gene TRAPPC12, Length 3,401 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TRAPPC12-223	ENST00000497597	MED22	Q15528	200 aa		10.49	□□□□□ -0.73
TRAPPC12-223	ENST00000497597	TYSND1	Q2T9J0	566 aa		10.49	□□□□□ -0.73
TRAPPC12-223	ENST00000497597	AMIGO1	Q86WK6	493 aa		10.49	□□□□□ -0.73
TRAPPC12-223	ENST00000497597	NLGN4X	Q8N0W4	816 aa		10.49	□□□□□ -0.73
TRAPPC12-223	ENST00000497597	STX19	Q8N4C7	294 aa		10.49	□□□□□ -0.73
TRAPPC12-223	ENST00000497597	PARP16	Q8N5Y8	322 aa		10.49	□□□□□ -0.73
TRAPPC12-223	ENST00000497597	LRRC20	Q8TCA0	184 aa		10.49	□□□□□ -0.73
TRAPPC12-223	ENST00000497597	LPAR1	Q92633	364 aa		10.49	□□□□□ -0.73
TRAPPC12-223	ENST00000497597	KATNAL1	Q9BW62	490 aa		10.49	□□□□□ -0.73
TRAPPC12-223	ENST00000497597	CYP3A43	Q9HB55	503 aa		10.49	□□□□□ -0.73
TRAPPC12-223	ENST00000497597	PIGV	Q9NUD9	493 aa		10.49	□□□□□ -0.73
TRAPPC12-223	ENST00000497597	HSPB11	Q9Y547	144 aa		10.49	□□□□□ -0.73
TRAPPC12-223	ENST00000497597	PCDHB14	Q9Y5E9	798 aa		10.49	□□□□□ -0.73
TRAPPC12-223	ENST00000497597	TIMM13	Q9Y5L4	95 aa	Predicted RBP	10.49	□□□□□ -0.73
TRAPPC12-223	ENST00000497597	ITGB4	P16144	1822 aa		10.49	□□□□□ -0.73
TRAPPC12-223	ENST00000497597	ZNF831	Q5JPB2	1677 aa		10.49	□□□□□ -0.73
TRAPPC12-223	ENST00000497597		A0A096LPI6	279 aa		10.49	□□□□□ -0.73
TRAPPC12-223	ENST00000497597		A0A1B0GTL3	188 aa		10.49	□□□□□ -0.73
TRAPPC12-223	ENST00000497597	FAM25A	B3EWG3	89 aa		10.49	□□□□□ -0.73
TRAPPC12-223	ENST00000497597	FAM25C	B3EWG5	89 aa		10.49	□□□□□ -0.73
TRAPPC12-223	ENST00000497597	FAM25G	B3EWG6	89 aa		10.49	□□□□□ -0.73
TRAPPC12-223	ENST00000497597	ACKR2	O00590	384 aa		10.49	□□□□□ -0.73
TRAPPC12-223	ENST00000497597	ONECUT3	O60422	494 aa	Predicted RBP	10.49	□□□□□ -0.73
TRAPPC12-223	ENST00000497597	RHOBTB1	O94844	696 aa		10.49	□□□□□ -0.73
TRAPPC12-223	ENST00000497597	SLC2A4	P14672	509 aa		10.49	□□□□□ -0.73
TRAPPC12-223	ENST00000497597	C21orf33	P30042	268 aa	Predicted RBP	10.49	□□□□□ -0.73
TRAPPC12-223	ENST00000497597	NOS2	P35228	1153 aa		10.49	□□□□□ -0.73
TRAPPC12-223	ENST00000497597	P2RX3	P56373	397 aa		10.49	□□□□□ -0.73
TRAPPC12-223	ENST00000497597	FCHO2	Q0JRZ9	810 aa		10.49	□□□□□ -0.73
TRAPPC12-223	ENST00000497597	PRKG2	Q13237	762 aa		10.49	□□□□□ -0.73
TRAPPC12-223	ENST00000497597	ZNF267	Q14586	743 aa	Predicted RBP	10.49	□□□□□ -0.73
TRAPPC12-223	ENST00000497597	UNC50	Q53HI1	259 aa		10.49	□□□□□ -0.73
TRAPPC12-223	ENST00000497597	ARMCX4	Q5H9R4	360 aa		10.49	□□□□□ -0.73
TRAPPC12-223	ENST00000497597	IER5	Q5VY09	327 aa		10.49	□□□□□ -0.73
TRAPPC12-223	ENST00000497597	GLB1L3	Q8NCI6	653 aa	Predicted RBP	10.49	□□□□□ -0.73
TRAPPC12-223	ENST00000497597	OR8H1	Q8NGG4	311 aa		10.49	□□□□□ -0.73
TRAPPC12-223	ENST00000497597	KHSRP	Q92945	711 aa	Known RBP eCLIP	10.49	□□□□□ -0.73	6e-11	■■■□□ 18.6
TRAPPC12-223	ENST00000497597	TSPAN17	Q96FV3	270 aa		10.49	□□□□□ -0.73
TRAPPC12-223	ENST00000497597	RBM4B	Q9BQ04	359 aa	Known RBP	10.49	□□□□□ -0.73
TRAPPC12-223	ENST00000497597	RBM4	Q9BWF3	364 aa	Known RBP	10.49	□□□□□ -0.73
TRAPPC12-223	ENST00000497597	GSTO2	Q9H4Y5	243 aa		10.49	□□□□□ -0.73
TRAPPC12-223	ENST00000497597	TMEM134	Q9H6X4	195 aa		10.49	□□□□□ -0.73
TRAPPC12-223	ENST00000497597	EIF2B3	Q9NR50	452 aa	Known RBP	10.49	□□□□□ -0.73
TRAPPC12-223	ENST00000497597	CD274	Q9NZQ7	290 aa		10.49	□□□□□ -0.73
TRAPPC12-223	ENST00000497597	POLR3H	Q9Y535	204 aa	Predicted RBP	10.49	□□□□□ -0.73
TRAPPC12-223	ENST00000497597	KCTD3	Q9Y597	815 aa		10.49	□□□□□ -0.73
TRAPPC12-223	ENST00000497597	OAS3	Q9Y6K5	1087 aa	Known RBP	10.49	□□□□□ -0.73
TRAPPC12-223	ENST00000497597	EP400	Q96L91	3159 aa		10.49	□□□□□ -0.73
TRAPPC12-223	ENST00000497597	PTPRF	P10586	1907 aa		10.49	□□□□□ -0.73
TRAPPC12-223	ENST00000497597	DNAH12	Q6ZR08	3092 aa		10.49	□□□□□ -0.73
TRAPPC12-223	ENST00000497597		A0A1W2PP18	115 aa		10.49	□□□□□ -0.73
TRAPPC12-223	ENST00000497597	SMLR1	H3BR10	107 aa		10.49	□□□□□ -0.73
TRAPPC12-223	ENST00000497597		H3BUI4	141 aa		10.49	□□□□□ -0.73
TRAPPC12-223	ENST00000497597		M0R129	80 aa		10.49	□□□□□ -0.73
TRAPPC12-223	ENST00000497597	B4GALT4	O60513	344 aa		10.49	□□□□□ -0.73
TRAPPC12-223	ENST00000497597	CAPNS1	P04632	268 aa		10.49	□□□□□ -0.73
TRAPPC12-223	ENST00000497597	PFKL	P17858	780 aa		10.49	□□□□□ -0.73
TRAPPC12-223	ENST00000497597	HRH2	P25021	359 aa		10.49	□□□□□ -0.73
TRAPPC12-223	ENST00000497597	POU1F1	P28069	291 aa		10.49	□□□□□ -0.73
TRAPPC12-223	ENST00000497597	CCR1	P32246	355 aa		10.49	□□□□□ -0.73
TRAPPC12-223	ENST00000497597	BST2	Q10589	180 aa	Known RBP	10.49	□□□□□ -0.73
TRAPPC12-223	ENST00000497597	SLAMF1	Q13291	335 aa		10.49	□□□□□ -0.73
TRAPPC12-223	ENST00000497597	TOP3A	Q13472	1001 aa	Predicted RBP	10.49	□□□□□ -0.73
TRAPPC12-223	ENST00000497597	IL27RA	Q6UWB1	636 aa		10.49	□□□□□ -0.73
TRAPPC12-223	ENST00000497597	ANGPTL8	Q6UXH0	198 aa		10.49	□□□□□ -0.73
TRAPPC12-223	ENST00000497597		Q6ZPB1	254 aa	Predicted RBP	10.49	□□□□□ -0.73
TRAPPC12-223	ENST00000497597	ADHFE1	Q8IWW8	467 aa		10.49	□□□□□ -0.73
TRAPPC12-223	ENST00000497597	MINDY1	Q8N5J2	469 aa		10.49	□□□□□ -0.73
TRAPPC12-223	ENST00000497597	TMEM174	Q8WUU8	243 aa		10.49	□□□□□ -0.73
TRAPPC12-223	ENST00000497597	PHF21A	Q96BD5	680 aa		10.49	□□□□□ -0.73
TRAPPC12-223	ENST00000497597	MTERF3	Q96E29	417 aa		10.49	□□□□□ -0.73
TRAPPC12-223	ENST00000497597	ZBTB18	Q99592	522 aa		10.49	□□□□□ -0.73
TRAPPC12-223	ENST00000497597	BCO2	Q9BYV7	579 aa		10.49	□□□□□ -0.73
TRAPPC12-223	ENST00000497597	OR51E2	Q9H255	320 aa		10.49	□□□□□ -0.73
TRAPPC12-223	ENST00000497597	GOLGA2P5	Q9HBQ8	144 aa		10.49	□□□□□ -0.73
TRAPPC12-223	ENST00000497597	POLR3B	Q9NW08	1133 aa	Predicted RBP	10.49	□□□□□ -0.73
TRAPPC12-223	ENST00000497597	FZD10	Q9ULW2	581 aa		10.49	□□□□□ -0.73
TRAPPC12-223	ENST00000497597	NHS	Q6T4R5	1651 aa		10.48	□□□□□ -0.73
TRAPPC12-223	ENST00000497597		I3L521	148 aa		10.48	□□□□□ -0.73
TRAPPC12-223	ENST00000497597	NOS1AP	O75052	506 aa	Predicted RBP	10.48	□□□□□ -0.73
TRAPPC12-223	ENST00000497597	ALX3	O95076	343 aa		10.48	□□□□□ -0.73
TRAPPC12-223	ENST00000497597	CYP11A1	P05108	521 aa		10.48	□□□□□ -0.73
TRAPPC12-223	ENST00000497597	JUNB	P17275	347 aa	Predicted RBP	10.48	□□□□□ -0.73
TRAPPC12-223	ENST00000497597	INPP1	P49441	399 aa		10.48	□□□□□ -0.73
TRAPPC12-223	ENST00000497597	AGTR2	P50052	363 aa		10.48	□□□□□ -0.73
TRAPPC12-223	ENST00000497597	GTDC1	Q4AE62	458 aa		10.48	□□□□□ -0.73
TRAPPC12-223	ENST00000497597	FAM151A	Q8WW52	585 aa		10.48	□□□□□ -0.73
TRAPPC12-223	ENST00000497597	SEPT1	Q8WYJ6	367 aa		10.48	□□□□□ -0.73
TRAPPC12-223	ENST00000497597	PYCR2	Q96C36	320 aa		10.48	□□□□□ -0.73
TRAPPC12-223	ENST00000497597	FAM120B	Q96EK7	910 aa	Known RBP	10.48	□□□□□ -0.73
TRAPPC12-223	ENST00000497597	NT5M	Q9NPB1	228 aa		10.48	□□□□□ -0.73
TRAPPC12-223	ENST00000497597	MAGEL2	Q9UJ55	1249 aa		10.48	□□□□□ -0.73
TRAPPC12-223	ENST00000497597	PRKAB1	Q9Y478	270 aa		10.48	□□□□□ -0.73
TRAPPC12-223	ENST00000497597	PCDHGB6	Q9Y5F9	930 aa		10.48	□□□□□ -0.73
TRAPPC12-223	ENST00000497597	EFCAB10	A6NFE3	127 aa		10.48	□□□□□ -0.73
TRAPPC12-223	ENST00000497597	AGAP5	A6NIR3	686 aa		10.48	□□□□□ -0.73
TRAPPC12-223	ENST00000497597	TREH	O43280	583 aa		10.48	□□□□□ -0.73
TRAPPC12-223	ENST00000497597	USP2	O75604	605 aa	Predicted RBP	10.48	□□□□□ -0.73
TRAPPC12-223	ENST00000497597	GABARAP	O95166	117 aa		10.48	□□□□□ -0.73
TRAPPC12-223	ENST00000497597	UMPS	P11172	480 aa		10.48	□□□□□ -0.73

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