RNA–Protein interactions for RNA: ENST00000496896.1

TRIM4-205, Transcript of tripartite motif containing 4, humanhuman

TSL 5

Gene TRIM4, Length 601 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-205ENST00000496896 PNLIPRP3Q17RR3 467 aa3.96□□□□□ -1.78
TRIM4-205ENST00000496896 ZNF805Q5CZA5 627 aa3.96□□□□□ -1.78
TRIM4-205ENST00000496896 ARHGAP17Q68EM7 881 aa3.96□□□□□ -1.78
TRIM4-205ENST00000496896 CEACAM20Q6UY09 585 aa3.96□□□□□ -1.78
TRIM4-205ENST00000496896 CLEC17AQ6ZS10 378 aa3.96□□□□□ -1.78
TRIM4-205ENST00000496896 SEPT14Q6ZU15 432 aa3.96□□□□□ -1.78
TRIM4-205ENST00000496896 Q75L30 129 aa3.96□□□□□ -1.78
TRIM4-205ENST00000496896 ATG9AQ7Z3C6 839 aa3.96□□□□□ -1.78
TRIM4-205ENST00000496896 R3HCC1LQ7Z5L2 792 aaKnown RBP3.96□□□□□ -1.78
TRIM4-205ENST00000496896 SLC38A9Q8NBW4 561 aa3.96□□□□□ -1.78
TRIM4-205ENST00000496896 RDM1Q8NG50 284 aa3.96□□□□□ -1.78
TRIM4-205ENST00000496896 ETNPPLQ8TBG4 499 aa3.96□□□□□ -1.78
TRIM4-205ENST00000496896 PHF21AQ96BD5 680 aa3.96□□□□□ -1.78
TRIM4-205ENST00000496896 BARHL1Q9BZE3 327 aa3.96□□□□□ -1.78
TRIM4-205ENST00000496896 PDZD7Q9H5P4 517 aa3.96□□□□□ -1.78
TRIM4-205ENST00000496896 TFB2MQ9H5Q4 396 aaKnown RBP3.96□□□□□ -1.78
TRIM4-205ENST00000496896 FBXW11Q9UKB1 542 aa3.96□□□□□ -1.78
TRIM4-205ENST00000496896 PIK3R4Q99570 1358 aa3.96□□□□□ -1.78
TRIM4-205ENST00000496896 NEO1Q92859 1461 aa3.96□□□□□ -1.78
TRIM4-205ENST00000496896 POGZQ7Z3K3 1410 aa3.95□□□□□ -1.78
TRIM4-205ENST00000496896 NEXMIFQ5QGS0 1516 aa3.95□□□□□ -1.78
TRIM4-205ENST00000496896 PNPLA6Q8IY17 1366 aa3.95□□□□□ -1.78
TRIM4-205ENST00000496896 A0A1W2PPI3 338 aa3.95□□□□□ -1.78
TRIM4-205ENST00000496896 BAG4O95429 457 aaKnown RBP3.95□□□□□ -1.78
TRIM4-205ENST00000496896 CLEC3BP05452 202 aa3.95□□□□□ -1.78
TRIM4-205ENST00000496896 PDE1CQ14123 709 aaPredicted RBP3.95□□□□□ -1.78
TRIM4-205ENST00000496896 FRG1Q14331 258 aaKnown RBP3.95□□□□□ -1.78
TRIM4-205ENST00000496896 KIR2DS3Q14952 304 aa3.95□□□□□ -1.78
TRIM4-205ENST00000496896 RAB6CQ53S08 254 aa3.95□□□□□ -1.78
TRIM4-205ENST00000496896 BMP2KLQ5H9B9 411 aa3.95□□□□□ -1.78
TRIM4-205ENST00000496896 SFMBT2Q5VUG0 894 aa3.95□□□□□ -1.78
TRIM4-205ENST00000496896 TSPAN33Q86UF1 283 aa3.95□□□□□ -1.78
TRIM4-205ENST00000496896 DIS3L2Q8IYB7 885 aaKnown RBP3.95□□□□□ -1.78
TRIM4-205ENST00000496896 SLC44A1Q8WWI5 657 aa3.95□□□□□ -1.78
TRIM4-205ENST00000496896 TM9SF4Q92544 642 aa3.95□□□□□ -1.78
TRIM4-205ENST00000496896 ANP32BQ92688 251 aaKnown RBP3.95□□□□□ -1.78
TRIM4-205ENST00000496896 RAB6CQ9H0N0 254 aa3.95□□□□□ -1.78
TRIM4-205ENST00000496896 LRMDAQ9H2I8 198 aa3.95□□□□□ -1.78
TRIM4-205ENST00000496896 RANGRFQ9HD47 186 aaPredicted RBP3.95□□□□□ -1.78
TRIM4-205ENST00000496896 TERF2IPQ9NYB0 399 aa3.95□□□□□ -1.78
TRIM4-205ENST00000496896 MAP3K20Q9NYL2 800 aaKnown RBP3.95□□□□□ -1.78
TRIM4-205ENST00000496896 ZNF624Q9P2J8 865 aaPredicted RBP3.95□□□□□ -1.78
TRIM4-205ENST00000496896 CNOT8Q9UFF9 292 aaKnown RBP3.95□□□□□ -1.78
TRIM4-205ENST00000496896 CLIC4Q9Y696 253 aa3.95□□□□□ -1.78
TRIM4-205ENST00000496896 NOTCH3Q9UM47 2321 aa3.95□□□□□ -1.78
TRIM4-205ENST00000496896 KIF20BQ96Q89 1820 aa3.95□□□□□ -1.78
TRIM4-205ENST00000496896 DLC1Q96QB1 1528 aa3.95□□□□□ -1.78
TRIM4-205ENST00000496896 TULP4Q9NRJ4 1543 aa3.95□□□□□ -1.78
TRIM4-205ENST00000496896 NPATQ14207 1427 aa3.95□□□□□ -1.78
TRIM4-205ENST00000496896 SNED1Q8TER0 1413 aa3.95□□□□□ -1.78
TRIM4-205ENST00000496896 ATP7BP35670 1465 aa3.94□□□□□ -1.78
TRIM4-205ENST00000496896 EIF4E1BA6NMX2 242 aaKnown RBP3.94□□□□□ -1.78
TRIM4-205ENST00000496896 MAP2K7O14733 419 aa3.94□□□□□ -1.78
TRIM4-205ENST00000496896 SCAMP1O15126 338 aa3.94□□□□□ -1.78
TRIM4-205ENST00000496896 NDUFS3O75489 264 aa3.94□□□□□ -1.78
TRIM4-205ENST00000496896 CCNDBP1O95273 360 aa3.94□□□□□ -1.78
TRIM4-205ENST00000496896 TPM2P07951 284 aa3.94□□□□□ -1.78
TRIM4-205ENST00000496896 CDH2P19022 906 aaPredicted RBP3.94□□□□□ -1.78
TRIM4-205ENST00000496896 HSD17B4P51659 736 aa3.94□□□□□ -1.78
TRIM4-205ENST00000496896 CTSCP53634 463 aa3.94□□□□□ -1.78
TRIM4-205ENST00000496896 TAS2R40P59535 323 aa3.94□□□□□ -1.78
TRIM4-205ENST00000496896 ERVK11-1P61568 191 aa3.94□□□□□ -1.78
TRIM4-205ENST00000496896 COG7P83436 770 aa3.94□□□□□ -1.78
TRIM4-205ENST00000496896 NUCB1Q02818 461 aa3.94□□□□□ -1.78
TRIM4-205ENST00000496896 GOLGA8DPQ0D2H9 430 aa3.94□□□□□ -1.78
TRIM4-205ENST00000496896 NIPAL4Q0D2K0 466 aa3.94□□□□□ -1.78
TRIM4-205ENST00000496896 LMOD3Q0VAK6 560 aa3.94□□□□□ -1.78
TRIM4-205ENST00000496896 ZNF876PQ49A33 203 aa3.94□□□□□ -1.78
TRIM4-205ENST00000496896 ARHGAP12Q8IWW6 846 aa3.94□□□□□ -1.78
TRIM4-205ENST00000496896 PM20D2Q8IYS1 436 aa3.94□□□□□ -1.78
TRIM4-205ENST00000496896 CNTROBQ8N137 903 aa3.94□□□□□ -1.78
TRIM4-205ENST00000496896 GCSAMQ8N6F7 178 aa3.94□□□□□ -1.78
TRIM4-205ENST00000496896 NAXEQ8NCW5 288 aa3.94□□□□□ -1.78
TRIM4-205ENST00000496896 UTP15Q8TED0 518 aaKnown RBP3.94□□□□□ -1.78
TRIM4-205ENST00000496896 SEC62Q99442 399 aaKnown RBP3.94□□□□□ -1.78
TRIM4-205ENST00000496896 LITAFQ99732 161 aa3.94□□□□□ -1.78
TRIM4-205ENST00000496896 SCRT2Q9NQ03 307 aa3.94□□□□□ -1.78
TRIM4-205ENST00000496896 DDX43Q9NXZ2 648 aaKnown RBP3.94□□□□□ -1.78
TRIM4-205ENST00000496896 ZKSCAN7Q9P0L1 754 aaPredicted RBP3.94□□□□□ -1.78
TRIM4-205ENST00000496896 COPG2Q9UBF2 871 aa3.94□□□□□ -1.78
TRIM4-205ENST00000496896 ACAD8Q9UKU7 415 aa3.94□□□□□ -1.78
TRIM4-205ENST00000496896 ARHGEF40Q8TER5 1519 aa3.94□□□□□ -1.78
TRIM4-205ENST00000496896 PTCH1Q13635 1447 aa3.94□□□□□ -1.78
TRIM4-205ENST00000496896 ERCC6L2Q5T890 1561 aa3.93□□□□□ -1.78
TRIM4-205ENST00000496896 A0A0G2JNG1 304 aa3.93□□□□□ -1.78
TRIM4-205ENST00000496896 C1orf226A1L170 272 aa3.93□□□□□ -1.78
TRIM4-205ENST00000496896 C5orf60A6NFR6 353 aa3.93□□□□□ -1.78
TRIM4-205ENST00000496896 SMIM1B2RUZ4 78 aa3.93□□□□□ -1.78
TRIM4-205ENST00000496896 H0YIN7 160 aa3.93□□□□□ -1.78
TRIM4-205ENST00000496896 ATP2A1O14983 1001 aa3.93□□□□□ -1.78
TRIM4-205ENST00000496896 EPB41L2O43491 1005 aaKnown RBP3.93□□□□□ -1.78
TRIM4-205ENST00000496896 MLYCDO95822 493 aa3.93□□□□□ -1.78
TRIM4-205ENST00000496896 SPARCP09486 303 aa3.93□□□□□ -1.78
TRIM4-205ENST00000496896 MCCP23508 829 aa3.93□□□□□ -1.78
TRIM4-205ENST00000496896 CCR9P51686 369 aa3.93□□□□□ -1.78
TRIM4-205ENST00000496896 CCDC173Q0VFZ6 552 aa3.93□□□□□ -1.78
TRIM4-205ENST00000496896 LRMPQ12912 555 aa3.93□□□□□ -1.78
TRIM4-205ENST00000496896 KIR2DS5Q14953 304 aa3.93□□□□□ -1.78
TRIM4-205ENST00000496896 WDR38Q5JTN6 314 aa3.93□□□□□ -1.78
TRIM4-205ENST00000496896 NSUN5P2Q63ZY6 315 aa3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms