RNA–Protein interactions for RNA: ENST00000496043.5

PTPRF-214, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 5

Gene PTPRF, Length 415 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-214ENST00000496043 TIPARPQ7Z3E1 657 aaKnown RBP12.48□□□□□ -0.41
PTPRF-214ENST00000496043 TMEM139Q8IV31 216 aa12.48□□□□□ -0.41
PTPRF-214ENST00000496043 RNF10Q8N5U6 811 aaKnown RBP12.48□□□□□ -0.41
PTPRF-214ENST00000496043 FAM71DQ8N9W8 422 aa12.48□□□□□ -0.41
PTPRF-214ENST00000496043 OR13C4Q8NGS5 318 aa12.48□□□□□ -0.41
PTPRF-214ENST00000496043 OR2L2Q8NH16 312 aa12.48□□□□□ -0.41
PTPRF-214ENST00000496043 UBE2Q2Q8WVN8 375 aa12.48□□□□□ -0.41
PTPRF-214ENST00000496043 KLHL6Q8WZ60 621 aa12.48□□□□□ -0.41
PTPRF-214ENST00000496043 RSC1A1Q92681 617 aa12.48□□□□□ -0.41
PTPRF-214ENST00000496043 LINC00615Q96LM1 132 aaPredicted RBP12.48□□□□□ -0.41
PTPRF-214ENST00000496043 ZNF768Q9H5H4 540 aaKnown RBP12.48□□□□□ -0.41
PTPRF-214ENST00000496043 GPN2Q9H9Y4 310 aaPredicted RBP12.48□□□□□ -0.41
PTPRF-214ENST00000496043 PACSIN2Q9UNF0 486 aaPredicted RBP12.48□□□□□ -0.41
PTPRF-214ENST00000496043 LOC400499M0QZD8 3231 aa12.48□□□□□ -0.41
PTPRF-214ENST00000496043 MGAQ8IWI9 3026 aa12.48□□□□□ -0.41
PTPRF-214ENST00000496043 LOC101059948A0A1B0GTJ6 334 aa12.47□□□□□ -0.41
PTPRF-214ENST00000496043 ZNF891A8MT65 544 aaPredicted RBP12.47□□□□□ -0.41
PTPRF-214ENST00000496043 AGAP14A8MT82 685 aa12.47□□□□□ -0.41
PTPRF-214ENST00000496043 CFAP99D6REC4 459 aa12.47□□□□□ -0.41
PTPRF-214ENST00000496043 KIF1CO43896 1103 aaKnown RBP12.47□□□□□ -0.41
PTPRF-214ENST00000496043 FTCDO95954 541 aa12.47□□□□□ -0.41
PTPRF-214ENST00000496043 ITGALP20701 1170 aa12.47□□□□□ -0.41
PTPRF-214ENST00000496043 PBLDP30039 288 aaPredicted RBP12.47□□□□□ -0.41
PTPRF-214ENST00000496043 CAPZBP47756 277 aa12.47□□□□□ -0.41
PTPRF-214ENST00000496043 MAP7Q14244 749 aa12.47□□□□□ -0.41
PTPRF-214ENST00000496043 GSE1Q14687 1217 aa12.47□□□□□ -0.41
PTPRF-214ENST00000496043 GPR33Q49SQ1 333 aa12.47□□□□□ -0.41
PTPRF-214ENST00000496043 BCL7AQ4VC05 210 aa12.47□□□□□ -0.41
PTPRF-214ENST00000496043 CYB5D1Q6P9G0 228 aa12.47□□□□□ -0.41
PTPRF-214ENST00000496043 FAM92BQ6ZTR7 304 aa12.47□□□□□ -0.41
PTPRF-214ENST00000496043 PRSS42Q7Z5A4 293 aa12.47□□□□□ -0.41
PTPRF-214ENST00000496043 SNX20Q7Z614 316 aa12.47□□□□□ -0.41
PTPRF-214ENST00000496043 KLHDC8BQ8IXV7 354 aa12.47□□□□□ -0.41
PTPRF-214ENST00000496043 CFAP206Q8IYR0 622 aa12.47□□□□□ -0.41
PTPRF-214ENST00000496043 ESX1Q8N693 406 aa12.47□□□□□ -0.41
PTPRF-214ENST00000496043 SPC24Q8NBT2 197 aa12.47□□□□□ -0.41
PTPRF-214ENST00000496043 SLC45A3Q96JT2 553 aa12.47□□□□□ -0.41
PTPRF-214ENST00000496043 OR6C1Q96RD1 312 aa12.47□□□□□ -0.41
PTPRF-214ENST00000496043 INSM2Q96T92 566 aaPredicted RBP12.47□□□□□ -0.41
PTPRF-214ENST00000496043 COPS8Q99627 209 aa12.47□□□□□ -0.41
PTPRF-214ENST00000496043 CCM2Q9BSQ5 444 aa12.47□□□□□ -0.41
PTPRF-214ENST00000496043 WWP1Q9H0M0 922 aa12.47□□□□□ -0.41
PTPRF-214ENST00000496043 FAM96AQ9H5X1 160 aa12.47□□□□□ -0.41
PTPRF-214ENST00000496043 LRRC40Q9H9A6 602 aa12.47□□□□□ -0.41
PTPRF-214ENST00000496043 IMP3Q9NV31 184 aaKnown RBP12.47□□□□□ -0.41
PTPRF-214ENST00000496043 SIDT1Q9NXL6 827 aaKnown RBP12.47□□□□□ -0.41
PTPRF-214ENST00000496043 COLEC10Q9Y6Z7 277 aa12.47□□□□□ -0.41
PTPRF-214ENST00000496043 C17orf113A0A1B0GUU1 675 aa12.46□□□□□ -0.41
PTPRF-214ENST00000496043 GOLGA6L6A8MZA4 724 aa12.46□□□□□ -0.41
PTPRF-214ENST00000496043 LDB2O43679 373 aa12.46□□□□□ -0.41
PTPRF-214ENST00000496043 METTL18O95568 372 aa12.46□□□□□ -0.41
PTPRF-214ENST00000496043 DLGAP3O95886 979 aa12.46□□□□□ -0.41
PTPRF-214ENST00000496043 POLBP06746 335 aa12.46□□□□□ -0.41
PTPRF-214ENST00000496043 MTHFD1P11586 935 aaKnown RBP12.46□□□□□ -0.41
PTPRF-214ENST00000496043 ATP1B2P14415 290 aaPredicted RBP12.46□□□□□ -0.41
PTPRF-214ENST00000496043 TPH1P17752 444 aa12.46□□□□□ -0.41
PTPRF-214ENST00000496043 NELFEP18615 380 aaKnown RBP12.46□□□□□ -0.41
PTPRF-214ENST00000496043 STIP1P31948 543 aaKnown RBP12.46□□□□□ -0.41
PTPRF-214ENST00000496043 ZNF140P52738 457 aaPredicted RBP12.46□□□□□ -0.41
PTPRF-214ENST00000496043 SH3BP2P78314 561 aa12.46□□□□□ -0.41
PTPRF-214ENST00000496043 MC1RQ01726 317 aa12.46□□□□□ -0.41
PTPRF-214ENST00000496043 KRT33BQ14525 404 aa12.46□□□□□ -0.41
PTPRF-214ENST00000496043 PLCL1Q15111 1095 aa12.46□□□□□ -0.41
PTPRF-214ENST00000496043 KCTD11Q693B1 232 aa12.46□□□□□ -0.41
PTPRF-214ENST00000496043 BORAQ6PGQ7 559 aa12.46□□□□□ -0.41
PTPRF-214ENST00000496043 C6orf15Q6UXA7 325 aaPredicted RBP12.46□□□□□ -0.41
PTPRF-214ENST00000496043 RASGRP3Q8IV61 690 aa12.46□□□□□ -0.41
PTPRF-214ENST00000496043 NXPE1Q8N323 547 aa12.46□□□□□ -0.41
PTPRF-214ENST00000496043 SLC35B2Q8TB61 432 aa12.46□□□□□ -0.41
PTPRF-214ENST00000496043 UBXN4Q92575 508 aa12.46□□□□□ -0.41
PTPRF-214ENST00000496043 HES6Q96HZ4 224 aa12.46□□□□□ -0.41
PTPRF-214ENST00000496043 C12orf66Q96MD2 445 aa12.46□□□□□ -0.41
PTPRF-214ENST00000496043 CATSPER2Q96P56 530 aa12.46□□□□□ -0.41
PTPRF-214ENST00000496043 ALS2CR12Q96Q35 445 aa12.46□□□□□ -0.41
PTPRF-214ENST00000496043 DESI2Q9BSY9 194 aa12.46□□□□□ -0.41
PTPRF-214ENST00000496043 ULBP3Q9BZM4 244 aa12.46□□□□□ -0.41
PTPRF-214ENST00000496043 FAM117AQ9C073 453 aa12.46□□□□□ -0.41
PTPRF-214ENST00000496043 PDE7BQ9NP56 450 aa12.46□□□□□ -0.41
PTPRF-214ENST00000496043 HRASLS2Q9NWW9 162 aa12.46□□□□□ -0.41
PTPRF-214ENST00000496043 ZDHHC3Q9NYG2 299 aa12.46□□□□□ -0.41
PTPRF-214ENST00000496043 SEMA5BQ9P283 1151 aa12.46□□□□□ -0.41
PTPRF-214ENST00000496043 SMG1Q96Q15 3661 aaKnown RBP12.46□□□□□ -0.42
PTPRF-214ENST00000496043 SDK2Q58EX2 2172 aa12.46□□□□□ -0.42
PTPRF-214ENST00000496043 A0A0U1RQJ8 604 aa12.45□□□□□ -0.42
PTPRF-214ENST00000496043 J3QKU1 62 aa12.45□□□□□ -0.42
PTPRF-214ENST00000496043 NKX2-8O15522 239 aa12.45□□□□□ -0.42
PTPRF-214ENST00000496043 SGTAO43765 313 aa12.45□□□□□ -0.42
PTPRF-214ENST00000496043 SPAG6O75602 509 aa12.45□□□□□ -0.42
PTPRF-214ENST00000496043 SLC35G4P0C7Q5 338 aa12.45□□□□□ -0.42
PTPRF-214ENST00000496043 FAM87AP0C7U9 286 aa12.45□□□□□ -0.42
PTPRF-214ENST00000496043 CCNYL3P0C7X3 344 aa12.45□□□□□ -0.42
PTPRF-214ENST00000496043 FGF5P12034 268 aa12.45□□□□□ -0.42
PTPRF-214ENST00000496043 NDUFS1P28331 727 aa12.45□□□□□ -0.42
PTPRF-214ENST00000496043 MC4RP32245 332 aa12.45□□□□□ -0.42
PTPRF-214ENST00000496043 ARL4DP49703 201 aa12.45□□□□□ -0.42
PTPRF-214ENST00000496043 NFATC3Q12968 1075 aa12.45□□□□□ -0.42
PTPRF-214ENST00000496043 KLF1Q13351 362 aaPredicted RBP12.45□□□□□ -0.42
PTPRF-214ENST00000496043 P3H1Q32P28 736 aa12.45□□□□□ -0.42
PTPRF-214ENST00000496043 ZRANB3Q5FWF4 1079 aa12.45□□□□□ -0.42
PTPRF-214ENST00000496043 CAPRIN2Q6IMN6 1127 aaKnown RBP12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms