RNA–Protein interactions for RNA: ENST00000495172.1

GARNL3-219, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 737 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-219ENST00000495172 MAPK1IP1LQ8NDC0 245 aa8.6□□□□□ -1.03
GARNL3-219ENST00000495172 PHF10Q8WUB8 498 aaKnown RBP8.6□□□□□ -1.03
GARNL3-219ENST00000495172 TMEM174Q8WUU8 243 aa8.6□□□□□ -1.03
GARNL3-219ENST00000495172 HDAC10Q969S8 669 aa8.6□□□□□ -1.03
GARNL3-219ENST00000495172 NACC2Q96BF6 587 aa8.6□□□□□ -1.03
GARNL3-219ENST00000495172 PTERQ96BW5 349 aa8.6□□□□□ -1.03
GARNL3-219ENST00000495172 GPR137Q96N19 417 aa8.6□□□□□ -1.03
GARNL3-219ENST00000495172 KCTD15Q96SI1 283 aaPredicted RBP8.6□□□□□ -1.03
GARNL3-219ENST00000495172 VKORC1Q9BQB6 163 aa8.6□□□□□ -1.03
GARNL3-219ENST00000495172 ATP13A3Q9H7F0 1226 aa8.6□□□□□ -1.03
GARNL3-219ENST00000495172 SP110Q9HB58 689 aa8.6□□□□□ -1.03
GARNL3-219ENST00000495172 ZFYVE1Q9HBF4 777 aa8.6□□□□□ -1.03
GARNL3-219ENST00000495172 SLC22A11Q9NSA0 550 aa8.6□□□□□ -1.03
GARNL3-219ENST00000495172 TMEM248Q9NWD8 314 aa8.6□□□□□ -1.03
GARNL3-219ENST00000495172 DHCR7Q9UBM7 475 aaKnown RBP8.6□□□□□ -1.03
GARNL3-219ENST00000495172 GPN3Q9UHW5 284 aaPredicted RBP8.6□□□□□ -1.03
GARNL3-219ENST00000495172 CDC23Q9UJX2 597 aa8.6□□□□□ -1.03
GARNL3-219ENST00000495172 HS3ST3B1Q9Y662 390 aa8.6□□□□□ -1.03
GARNL3-219ENST00000495172 OR5K4A6NMS3 321 aa8.59□□□□□ -1.03
GARNL3-219ENST00000495172 FADS2P1A8MWK0 482 aa8.59□□□□□ -1.03
GARNL3-219ENST00000495172 IGHEP01854 428 aa8.59□□□□□ -1.03
GARNL3-219ENST00000495172 KRT5P13647 590 aa8.59□□□□□ -1.03
GARNL3-219ENST00000495172 SLC2A4P14672 509 aa8.59□□□□□ -1.03
GARNL3-219ENST00000495172 RHOQP17081 205 aa8.59□□□□□ -1.03
GARNL3-219ENST00000495172 ZNF8P17098 575 aaPredicted RBP8.59□□□□□ -1.03
GARNL3-219ENST00000495172 CD53P19397 219 aa8.59□□□□□ -1.03
GARNL3-219ENST00000495172 AGXTP21549 392 aa8.59□□□□□ -1.03
GARNL3-219ENST00000495172 IL4RP24394 825 aa8.59□□□□□ -1.03
GARNL3-219ENST00000495172 TMPRSS15P98073 1019 aa8.59□□□□□ -1.03
GARNL3-219ENST00000495172 STILQ15468 1287 aa8.59□□□□□ -1.03
GARNL3-219ENST00000495172 INO80DQ53TQ3 878 aaPredicted RBP8.59□□□□□ -1.03
GARNL3-219ENST00000495172 CXorf67Q86X51 503 aaPredicted RBP8.59□□□□□ -1.03
GARNL3-219ENST00000495172 BRIX1Q8TDN6 353 aaKnown RBP8.59□□□□□ -1.03
GARNL3-219ENST00000495172 STK32AQ8WU08 396 aa8.59□□□□□ -1.03
GARNL3-219ENST00000495172 PSMF1Q92530 271 aa8.59□□□□□ -1.03
GARNL3-219ENST00000495172 KREMEN1Q96MU8 473 aa8.59□□□□□ -1.03
GARNL3-219ENST00000495172 KRTAP17-1Q9BYP8 105 aa8.59□□□□□ -1.03
GARNL3-219ENST00000495172 RMI1Q9H9A7 625 aa8.59□□□□□ -1.03
GARNL3-219ENST00000495172 PDFQ9HBH1 243 aa8.59□□□□□ -1.03
GARNL3-219ENST00000495172 GDPD2Q9HCC8 539 aa8.59□□□□□ -1.03
GARNL3-219ENST00000495172 ZNF160Q9HCG1 818 aa8.59□□□□□ -1.03
GARNL3-219ENST00000495172 STMN3Q9NZ72 180 aa8.59□□□□□ -1.03
GARNL3-219ENST00000495172 IFT80Q9P2H3 777 aaPredicted RBP8.59□□□□□ -1.03
GARNL3-219ENST00000495172 ATXN10Q9UBB4 475 aa8.59□□□□□ -1.03
GARNL3-219ENST00000495172 PPARGC1AQ9UBK2 798 aaKnown RBP8.59□□□□□ -1.03
GARNL3-219ENST00000495172 UBA2Q9UBT2 640 aaPredicted RBP8.59□□□□□ -1.03
GARNL3-219ENST00000495172 OR12D3Q9UGF7 316 aa8.59□□□□□ -1.03
GARNL3-219ENST00000495172 DYTNA2CJ06 578 aa8.58□□□□□ -1.04
GARNL3-219ENST00000495172 CALUO43852 315 aaPredicted RBP8.58□□□□□ -1.04
GARNL3-219ENST00000495172 LRIG2O94898 1065 aa8.58□□□□□ -1.04
GARNL3-219ENST00000495172 ZBTB11O95625 1053 aaPredicted RBP8.58□□□□□ -1.04
GARNL3-219ENST00000495172 GLI1P08151 1106 aa8.58□□□□□ -1.04
GARNL3-219ENST00000495172 TEAD1P28347 426 aa8.58□□□□□ -1.04
GARNL3-219ENST00000495172 FLT3P36888 993 aa8.58□□□□□ -1.04
GARNL3-219ENST00000495172 MAPKAPK2P49137 400 aa8.58□□□□□ -1.04
GARNL3-219ENST00000495172 AMPD3Q01432 767 aa8.58□□□□□ -1.04
GARNL3-219ENST00000495172 INAQ16352 499 aa8.58□□□□□ -1.04
GARNL3-219ENST00000495172 DEFB110Q30KQ9 67 aa8.58□□□□□ -1.04
GARNL3-219ENST00000495172 C2CD6Q53TS8 623 aa8.58□□□□□ -1.04
GARNL3-219ENST00000495172 TDRD12Q587J7 1177 aaKnown RBP8.58□□□□□ -1.04
GARNL3-219ENST00000495172 SHEQ5VZ18 495 aa8.58□□□□□ -1.04
GARNL3-219ENST00000495172 C11orf57Q6ZUT1 292 aaPredicted RBP8.58□□□□□ -1.04
GARNL3-219ENST00000495172 PYROXD2Q8N2H3 581 aa8.58□□□□□ -1.04
GARNL3-219ENST00000495172 C1orf131Q8NDD1 294 aaKnown RBP8.58□□□□□ -1.04
GARNL3-219ENST00000495172 OR8K5Q8NH50 307 aa8.58□□□□□ -1.04
GARNL3-219ENST00000495172 ZNF606Q8WXB4 792 aa8.58□□□□□ -1.04
GARNL3-219ENST00000495172 C8orf44Q96CB5 159 aa8.58□□□□□ -1.04
GARNL3-219ENST00000495172 CXorf40BQ96DE9 158 aa8.58□□□□□ -1.04
GARNL3-219ENST00000495172 SEC16BQ96JE7 1060 aa8.58□□□□□ -1.04
GARNL3-219ENST00000495172 CFAP57Q96MR6 1250 aa8.58□□□□□ -1.04
GARNL3-219ENST00000495172 TUBGCP5Q96RT8 1024 aa8.58□□□□□ -1.04
GARNL3-219ENST00000495172 LMF1Q96S06 567 aa8.58□□□□□ -1.04
GARNL3-219ENST00000495172 WDR24Q96S15 920 aa8.58□□□□□ -1.04
GARNL3-219ENST00000495172 DHRS4Q9BTZ2 278 aa8.58□□□□□ -1.04
GARNL3-219ENST00000495172 GTPBP4Q9BZE4 634 aaKnown RBP8.58□□□□□ -1.04
GARNL3-219ENST00000495172 LRRC27Q9C0I9 530 aa8.58□□□□□ -1.04
GARNL3-219ENST00000495172 SPRTNQ9H040 489 aaPredicted RBP8.58□□□□□ -1.04
GARNL3-219ENST00000495172 RAB33BQ9H082 229 aa8.58□□□□□ -1.04
GARNL3-219ENST00000495172 PLCB1Q9NQ66 1216 aa8.58□□□□□ -1.04
GARNL3-219ENST00000495172 ASNSD1Q9NWL6 643 aa8.58□□□□□ -1.04
GARNL3-219ENST00000495172 HRASLS2Q9NWW9 162 aa8.58□□□□□ -1.04
GARNL3-219ENST00000495172 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP8.58□□□□□ -1.04
GARNL3-219ENST00000495172 NDOR1Q9UHB4 597 aa8.58□□□□□ -1.04
GARNL3-219ENST00000495172 CBLCQ9ULV8 474 aa8.58□□□□□ -1.04
GARNL3-219ENST00000495172 TRAF3IP3Q9Y228 551 aa8.58□□□□□ -1.04
GARNL3-219ENST00000495172 COQ4Q9Y3A0 265 aa8.58□□□□□ -1.04
GARNL3-219ENST00000495172 ASB1Q9Y576 335 aa8.58□□□□□ -1.04
GARNL3-219ENST00000495172 CFAP20Q9Y6A4 193 aaKnown RBP8.58□□□□□ -1.04
GARNL3-219ENST00000495172 DYSFO75923 2080 aa8.57□□□□□ -1.04
GARNL3-219ENST00000495172 CXorf51AA0A1B0GTR3 108 aa8.57□□□□□ -1.04
GARNL3-219ENST00000495172 A0A1W2PPR1 153 aa8.57□□□□□ -1.04
GARNL3-219ENST00000495172 OR6C74A6NCV1 312 aa8.57□□□□□ -1.04
GARNL3-219ENST00000495172 A6NNC1 897 aa8.57□□□□□ -1.04
GARNL3-219ENST00000495172 TBXAS1P24557 533 aaPredicted RBP8.57□□□□□ -1.04
GARNL3-219ENST00000495172 CHRNB4P30926 498 aa8.57□□□□□ -1.04
GARNL3-219ENST00000495172 SOX11P35716 441 aa8.57□□□□□ -1.04
GARNL3-219ENST00000495172 SCNN1BP51168 640 aa8.57□□□□□ -1.04
GARNL3-219ENST00000495172 NR0B1P51843 470 aaKnown RBP8.57□□□□□ -1.04
GARNL3-219ENST00000495172 PRSS12P56730 875 aa8.57□□□□□ -1.04
GARNL3-219ENST00000495172 ATP11AP98196 1134 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms