RNA–Protein interactions for RNA: ENST00000494776.1

LIME1-209, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 5

Gene LIME1, Length 391 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-209ENST00000494776 CES3Q6UWW8 571 aa15.62■□□□□ 0.09
LIME1-209ENST00000494776 TMEM26Q6ZUK4 368 aa15.62■□□□□ 0.09
LIME1-209ENST00000494776 SYDE1Q6ZW31 735 aaPredicted RBP15.62■□□□□ 0.09
LIME1-209ENST00000494776 PCGF5Q86SE9 256 aa15.62■□□□□ 0.09
LIME1-209ENST00000494776 CAND1Q86VP6 1230 aaKnown RBP15.62■□□□□ 0.09
LIME1-209ENST00000494776 WDR36Q8NI36 951 aaKnown RBP15.62■□□□□ 0.09
LIME1-209ENST00000494776 NCSTNQ92542 709 aa15.62■□□□□ 0.09
LIME1-209ENST00000494776 SLCO2A1Q92959 643 aa15.62■□□□□ 0.09
LIME1-209ENST00000494776 SGSM3Q96HU1 749 aa15.62■□□□□ 0.09
LIME1-209ENST00000494776 DPYSL5Q9BPU6 564 aa15.62■□□□□ 0.09
LIME1-209ENST00000494776 NUDT22Q9BRQ3 303 aa15.62■□□□□ 0.09
LIME1-209ENST00000494776 KIFC1Q9BW19 673 aa15.62■□□□□ 0.09
LIME1-209ENST00000494776 TBC1D10AQ9BXI6 508 aa15.62■□□□□ 0.09
LIME1-209ENST00000494776 WWP1Q9H0M0 922 aa15.62■□□□□ 0.09
LIME1-209ENST00000494776 TREX1Q9NSU2 369 aa15.62■□□□□ 0.09
LIME1-209ENST00000494776 IMP3Q9NV31 184 aaKnown RBP15.62■□□□□ 0.09
LIME1-209ENST00000494776 ZMIZ1Q9ULJ6 1067 aa15.62■□□□□ 0.09
LIME1-209ENST00000494776 SOX13Q9UN79 622 aa15.62■□□□□ 0.09
LIME1-209ENST00000494776 BPTFQ12830 3046 aa15.61■□□□□ 0.09
LIME1-209ENST00000494776 C17orf113A0A1B0GUU1 675 aa15.61■□□□□ 0.09
LIME1-209ENST00000494776 MAGEB16A2A368 324 aa15.61■□□□□ 0.09
LIME1-209ENST00000494776 FANCGO15287 622 aa15.61■□□□□ 0.09
LIME1-209ENST00000494776 CD3EAPO15446 510 aaKnown RBP15.61■□□□□ 0.09
LIME1-209ENST00000494776 VAPBO95292 243 aa15.61■□□□□ 0.09
LIME1-209ENST00000494776 FTH1P02794 183 aa15.61■□□□□ 0.09
LIME1-209ENST00000494776 GSTM1P09488 218 aa15.61■□□□□ 0.09
LIME1-209ENST00000494776 AMD1P17707 334 aa15.61■□□□□ 0.09
LIME1-209ENST00000494776 TTPAP49638 278 aa15.61■□□□□ 0.09
LIME1-209ENST00000494776 GSTM4Q03013 218 aa15.61■□□□□ 0.09
LIME1-209ENST00000494776 ZFP36L1Q07352 338 aaKnown RBP15.61■□□□□ 0.09
LIME1-209ENST00000494776 EIF3IQ13347 325 aaKnown RBP15.61■□□□□ 0.09
LIME1-209ENST00000494776 KRT33BQ14525 404 aa15.61■□□□□ 0.09
LIME1-209ENST00000494776 RPE65Q16518 533 aa15.61■□□□□ 0.09
LIME1-209ENST00000494776 PACS1Q6VY07 963 aa15.61■□□□□ 0.09
LIME1-209ENST00000494776 RAB11FIP2Q7L804 512 aa15.61■□□□□ 0.09
LIME1-209ENST00000494776 TMPRSS9Q7Z410 1059 aa15.61■□□□□ 0.09
LIME1-209ENST00000494776 RBM12BQ8IXT5 1001 aaKnown RBP15.61■□□□□ 0.09
LIME1-209ENST00000494776 FBXO39Q8N4B4 442 aa15.61■□□□□ 0.09
LIME1-209ENST00000494776 NAT8LQ8N9F0 302 aa15.61■□□□□ 0.09
LIME1-209ENST00000494776 MFSD3Q96ES6 412 aa15.61■□□□□ 0.09
LIME1-209ENST00000494776 LIN37Q96GY3 246 aaPredicted RBP15.61■□□□□ 0.09
LIME1-209ENST00000494776 C12orf66Q96MD2 445 aa15.61■□□□□ 0.09
LIME1-209ENST00000494776 SERPINB12Q96P63 405 aa15.61■□□□□ 0.09
LIME1-209ENST00000494776 SEMA6CQ9H3T2 930 aa15.61■□□□□ 0.09
LIME1-209ENST00000494776 EPB41L1Q9H4G0 881 aa15.61■□□□□ 0.09
LIME1-209ENST00000494776 UCK1Q9HA47 277 aa15.61■□□□□ 0.09
LIME1-209ENST00000494776 DKK4Q9UBT3 224 aa15.61■□□□□ 0.09
LIME1-209ENST00000494776 CFAP20Q9Y6A4 193 aaKnown RBP15.61■□□□□ 0.09
LIME1-209ENST00000494776 MAD1L1Q9Y6D9 718 aa15.61■□□□□ 0.09
LIME1-209ENST00000494776 PRSS21Q9Y6M0 314 aa15.61■□□□□ 0.09
LIME1-209ENST00000494776 USP24Q9UPU5 2620 aa15.61■□□□□ 0.09
LIME1-209ENST00000494776 LILRA5A6NI73 299 aa15.6■□□□□ 0.09
LIME1-209ENST00000494776 IFRD1O00458 451 aaPredicted RBP15.6■□□□□ 0.09
LIME1-209ENST00000494776 DNALI1O14645 258 aaPredicted RBP15.6■□□□□ 0.09
LIME1-209ENST00000494776 PFDN6O15212 129 aa15.6■□□□□ 0.09
LIME1-209ENST00000494776 OR1I1O60431 355 aa15.6■□□□□ 0.09
LIME1-209ENST00000494776 NDUFS3O75489 264 aa15.6■□□□□ 0.09
LIME1-209ENST00000494776 UBXN7O94888 489 aa15.6■□□□□ 0.09
LIME1-209ENST00000494776 JMJD7P0C870 316 aa15.6■□□□□ 0.09
LIME1-209ENST00000494776 HOXB3P14651 431 aaPredicted RBP15.6■□□□□ 0.09
LIME1-209ENST00000494776 MPSTP25325 297 aa15.6■□□□□ 0.09
LIME1-209ENST00000494776 PTGIRP43119 386 aa15.6■□□□□ 0.09
LIME1-209ENST00000494776 SQSTM1Q13501 440 aa15.6■□□□□ 0.09
LIME1-209ENST00000494776 SNAP47Q5SQN1 464 aa15.6■□□□□ 0.09
LIME1-209ENST00000494776 RNASEH2BQ5TBB1 312 aaKnown RBP15.6■□□□□ 0.09
LIME1-209ENST00000494776 IZUMO3Q5VZ72 239 aa15.6■□□□□ 0.09
LIME1-209ENST00000494776 ARMC3Q5W041 872 aa15.6■□□□□ 0.09
LIME1-209ENST00000494776 TMEM71Q6P5X7 295 aa15.6■□□□□ 0.09
LIME1-209ENST00000494776 SDCCAG8Q86SQ7 713 aaPredicted RBP15.6■□□□□ 0.09
LIME1-209ENST00000494776 LDB1Q86U70 411 aaPredicted RBP15.6■□□□□ 0.09
LIME1-209ENST00000494776 PROSER1Q86XN7 944 aa15.6■□□□□ 0.09
LIME1-209ENST00000494776 SLITRK4Q8IW52 837 aa15.6■□□□□ 0.09
LIME1-209ENST00000494776 MPP5Q8N3R9 675 aa15.6■□□□□ 0.09
LIME1-209ENST00000494776 LILRA3Q8N6C8 439 aaPredicted RBP15.6■□□□□ 0.09
LIME1-209ENST00000494776 OR4D9Q8NGE8 314 aa15.6■□□□□ 0.09
LIME1-209ENST00000494776 CCDC74BQ96LY2 380 aa15.6■□□□□ 0.09
LIME1-209ENST00000494776 INSM2Q96T92 566 aaPredicted RBP15.6■□□□□ 0.09
LIME1-209ENST00000494776 KRT12Q99456 494 aa15.6■□□□□ 0.09
LIME1-209ENST00000494776 CMKLR1Q99788 373 aa15.6■□□□□ 0.09
LIME1-209ENST00000494776 TSSK1BQ9BXA7 367 aa15.6■□□□□ 0.09
LIME1-209ENST00000494776 COG4Q9H9E3 785 aa15.6■□□□□ 0.09
LIME1-209ENST00000494776 SLC40A1Q9NP59 571 aa15.6■□□□□ 0.09
LIME1-209ENST00000494776 KMT2BQ9UMN6 2715 aaPredicted RBP15.6■□□□□ 0.09
LIME1-209ENST00000494776 PRAMEF33A0A0G2JMD5 474 aa15.59■□□□□ 0.09
LIME1-209ENST00000494776 IGHV5-10-1A0A0J9YXX1 117 aa15.59■□□□□ 0.09
LIME1-209ENST00000494776 PLD2O14939 933 aa15.59■□□□□ 0.09
LIME1-209ENST00000494776 TTI1O43156 1089 aa15.59■□□□□ 0.09
LIME1-209ENST00000494776 TNFSF15O95150 251 aa15.59■□□□□ 0.09
LIME1-209ENST00000494776 CAPNS1P04632 268 aa15.59■□□□□ 0.09
LIME1-209ENST00000494776 MTHFD1P11586 935 aaKnown RBP15.59■□□□□ 0.09
LIME1-209ENST00000494776 TYRP1P17643 537 aa15.59■□□□□ 0.09
LIME1-209ENST00000494776 CSF2RBP32927 897 aa15.59■□□□□ 0.09
LIME1-209ENST00000494776 LIMK2P53671 638 aa15.59■□□□□ 0.09
LIME1-209ENST00000494776 DHX34Q14147 1143 aaKnown RBP15.59■□□□□ 0.09
LIME1-209ENST00000494776 GPR18Q14330 331 aa15.59■□□□□ 0.09
LIME1-209ENST00000494776 SEMA3AQ14563 771 aa15.59■□□□□ 0.09
LIME1-209ENST00000494776 BRD3Q15059 726 aa15.59■□□□□ 0.09
LIME1-209ENST00000494776 PLCL1Q15111 1095 aa15.59■□□□□ 0.09
LIME1-209ENST00000494776 SYTL3Q4VX76 610 aa15.59■□□□□ 0.09
LIME1-209ENST00000494776 MRNIPQ6NTE8 343 aa15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms