RNA–Protein interactions for RNA: ENST00000494675.5

LRIF1-203, Transcript of ligand dependent nuclear receptor interacting factor 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LRIF1, Length 1,912 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIF1-203ENST00000494675 GAGE2DQ9UEU5 116 aa2.66□□□□□ -1.98
LRIF1-203ENST00000494675 RALYQ9UKM9 306 aaKnown RBP2.66□□□□□ -1.98
LRIF1-203ENST00000494675 YIPF1Q9Y548 306 aa2.66□□□□□ -1.98
LRIF1-203ENST00000494675 TAF1P21675 1872 aa2.66□□□□□ -1.98
LRIF1-203ENST00000494675 PRSS44E7EML9 344 aa2.66□□□□□ -1.98
LRIF1-203ENST00000494675 EIF3DO15371 548 aaKnown RBP eCLIP2.66□□□□□ -1.98
LRIF1-203ENST00000494675 SSX4O60224 188 aa2.66□□□□□ -1.98
LRIF1-203ENST00000494675 PRAMEF11O60813 436 aa2.66□□□□□ -1.98
LRIF1-203ENST00000494675 KRT19P08727 400 aa2.66□□□□□ -1.98
LRIF1-203ENST00000494675 FGF3P11487 239 aaPredicted RBP2.66□□□□□ -1.98
LRIF1-203ENST00000494675 TERF1P54274 439 aa2.66□□□□□ -1.98
LRIF1-203ENST00000494675 EEF1A2Q05639 463 aaKnown RBP2.66□□□□□ -1.98
LRIF1-203ENST00000494675 COASYQ13057 564 aa2.66□□□□□ -1.98
LRIF1-203ENST00000494675 PLA2G7Q13093 441 aa2.66□□□□□ -1.98
LRIF1-203ENST00000494675 MELKQ14680 651 aa2.66□□□□□ -1.98
LRIF1-203ENST00000494675 SNAPC1Q16533 368 aa2.66□□□□□ -1.98
LRIF1-203ENST00000494675 C9orf152Q5JTZ5 239 aa2.66□□□□□ -1.98
LRIF1-203ENST00000494675 ADALQ6DHV7 355 aa2.66□□□□□ -1.98
LRIF1-203ENST00000494675 FAM171BQ6P995 826 aa2.66□□□□□ -1.98
LRIF1-203ENST00000494675 LIN28BQ6ZN17 250 aaKnown RBP eCLIP2.66□□□□□ -1.982e-7■■□□□ 13.9
LRIF1-203ENST00000494675 Q75L30 129 aa2.66□□□□□ -1.98
LRIF1-203ENST00000494675 MUC20Q8N307 709 aaPredicted RBP2.66□□□□□ -1.98
LRIF1-203ENST00000494675 AFAP1Q8N556 730 aa2.66□□□□□ -1.98
LRIF1-203ENST00000494675 CCDC191Q8NCU4 936 aa2.66□□□□□ -1.98
LRIF1-203ENST00000494675 RBM15BQ8NDT2 890 aaKnown RBP2.66□□□□□ -1.98
LRIF1-203ENST00000494675 RDM1Q8NG50 284 aa2.66□□□□□ -1.98
LRIF1-203ENST00000494675 WDR20Q8TBZ3 569 aa2.66□□□□□ -1.98
LRIF1-203ENST00000494675 SECTM1Q8WVN6 248 aa2.66□□□□□ -1.98
LRIF1-203ENST00000494675 FAM81BQ96LP2 452 aa2.66□□□□□ -1.98
LRIF1-203ENST00000494675 DDX31Q9H8H2 851 aaKnown RBP2.66□□□□□ -1.98
LRIF1-203ENST00000494675 FKRPQ9H9S5 495 aa2.66□□□□□ -1.98
LRIF1-203ENST00000494675 OR2M5A3KFT3 312 aa2.65□□□□□ -1.99
LRIF1-203ENST00000494675 EME2A4GXA9 379 aaPredicted RBP2.65□□□□□ -1.99
LRIF1-203ENST00000494675 SNRNP70P08621 437 aaKnown RBP2.65□□□□□ -1.99
LRIF1-203ENST00000494675 DNASE1P24855 282 aa2.65□□□□□ -1.99
LRIF1-203ENST00000494675 ARCN1P48444 511 aaKnown RBP2.65□□□□□ -1.99
LRIF1-203ENST00000494675 FUT6P51993 359 aa2.65□□□□□ -1.99
LRIF1-203ENST00000494675 MLLT10P55197 1068 aa2.65□□□□□ -1.99
LRIF1-203ENST00000494675 SNTB1Q13884 538 aaKnown RBP2.65□□□□□ -1.99
LRIF1-203ENST00000494675 LETM2Q2VYF4 491 aa2.65□□□□□ -1.99
LRIF1-203ENST00000494675 GCNT6Q5T4J0 391 aa2.65□□□□□ -1.99
LRIF1-203ENST00000494675 TMEM211Q6ICI0 200 aa2.65□□□□□ -1.99
LRIF1-203ENST00000494675 CAPRIN2Q6IMN6 1127 aaKnown RBP2.65□□□□□ -1.99
LRIF1-203ENST00000494675 SPSB3Q6PJ21 355 aa2.65□□□□□ -1.99
LRIF1-203ENST00000494675 RBM23Q86U06 439 aaKnown RBP2.65□□□□□ -1.99
LRIF1-203ENST00000494675 SLC9B2Q86UD5 537 aa2.65□□□□□ -1.99
LRIF1-203ENST00000494675 EXOC3L1Q86VI1 746 aa2.65□□□□□ -1.99
LRIF1-203ENST00000494675 TMEM173Q86WV6 379 aaPredicted RBP2.65□□□□□ -1.99
LRIF1-203ENST00000494675 CEP57Q86XR8 500 aa2.65□□□□□ -1.99
LRIF1-203ENST00000494675 SPATA20Q8TB22 786 aa2.65□□□□□ -1.99
LRIF1-203ENST00000494675 LNX1Q8TBB1 728 aaPredicted RBP2.65□□□□□ -1.99
LRIF1-203ENST00000494675 TAS1R2Q8TE23 839 aa2.65□□□□□ -1.99
LRIF1-203ENST00000494675 SORCS1Q8WY21 1168 aa2.65□□□□□ -1.99
LRIF1-203ENST00000494675 SEMA4DQ92854 862 aa2.65□□□□□ -1.99
LRIF1-203ENST00000494675 ERLEC1Q96DZ1 483 aa2.65□□□□□ -1.99
LRIF1-203ENST00000494675 LINGO1Q96FE5 620 aa2.65□□□□□ -1.99
LRIF1-203ENST00000494675 CNDP2Q96KP4 475 aaKnown RBP2.65□□□□□ -1.99
LRIF1-203ENST00000494675 PRMT6Q96LA8 375 aaPredicted RBP2.65□□□□□ -1.99
LRIF1-203ENST00000494675 NEK1Q96PY6 1258 aa2.65□□□□□ -1.99
LRIF1-203ENST00000494675 POLR3CQ9BUI4 534 aaPredicted RBP2.65□□□□□ -1.99
LRIF1-203ENST00000494675 MOV10L1Q9BXT6 1211 aaKnown RBP2.65□□□□□ -1.99
LRIF1-203ENST00000494675 RETREG1Q9H6L5 497 aa2.65□□□□□ -1.99
LRIF1-203ENST00000494675 EBF2Q9HAK2 575 aa2.65□□□□□ -1.99
LRIF1-203ENST00000494675 HHATLQ9HCP6 504 aa2.65□□□□□ -1.99
LRIF1-203ENST00000494675 TRPC7Q9HCX4 862 aa2.65□□□□□ -1.99
LRIF1-203ENST00000494675 GDE1Q9NZC3 331 aa2.65□□□□□ -1.99
LRIF1-203ENST00000494675 BCCIPQ9P287 314 aaKnown RBP eCLIP2.65□□□□□ -1.99
LRIF1-203ENST00000494675 NFKBIL1Q9UBC1 381 aaPredicted RBP2.65□□□□□ -1.99
LRIF1-203ENST00000494675 CFDP1Q9UEE9 299 aaPredicted RBP2.65□□□□□ -1.99
LRIF1-203ENST00000494675 DLGAP4Q9Y2H0 992 aa2.65□□□□□ -1.99
LRIF1-203ENST00000494675 WBP11Q9Y2W2 641 aaKnown RBP2.65□□□□□ -1.99
LRIF1-203ENST00000494675 TCF20Q9UGU0 1960 aaKnown RBP2.65□□□□□ -1.99
LRIF1-203ENST00000494675 ASPDHA6ND91 283 aa2.64□□□□□ -1.99
LRIF1-203ENST00000494675 TO15178 435 aa2.64□□□□□ -1.99
LRIF1-203ENST00000494675 TSPAN1O60635 241 aa2.64□□□□□ -1.99
LRIF1-203ENST00000494675 CREG1O75629 220 aa2.64□□□□□ -1.99
LRIF1-203ENST00000494675 WISP2O76076 250 aa2.64□□□□□ -1.99
LRIF1-203ENST00000494675 GABRA5P31644 462 aa2.64□□□□□ -1.99
LRIF1-203ENST00000494675 AHRP35869 848 aa2.64□□□□□ -1.99
LRIF1-203ENST00000494675 PSMC4P43686 418 aa2.64□□□□□ -1.99
LRIF1-203ENST00000494675 ZNF132P52740 706 aa2.64□□□□□ -1.99
LRIF1-203ENST00000494675 CDH13P55290 713 aa2.64□□□□□ -1.99
LRIF1-203ENST00000494675 RUNX1T1Q06455 604 aa2.64□□□□□ -1.99
LRIF1-203ENST00000494675 CBWD6Q4V339 395 aa2.64□□□□□ -1.99
LRIF1-203ENST00000494675 ASPRV1Q53RT3 343 aa2.64□□□□□ -1.99
LRIF1-203ENST00000494675 RAB6CQ53S08 254 aa2.64□□□□□ -1.99
LRIF1-203ENST00000494675 CBWD3Q5JTY5 395 aa2.64□□□□□ -1.99
LRIF1-203ENST00000494675 PDSS1Q5T2R2 415 aa2.64□□□□□ -1.99
LRIF1-203ENST00000494675 ERMARDQ5T6L9 678 aa2.64□□□□□ -1.99
LRIF1-203ENST00000494675 C6orf163Q5TEZ5 329 aa2.64□□□□□ -1.99
LRIF1-203ENST00000494675 TEX38Q6PEX7 206 aa2.64□□□□□ -1.99
LRIF1-203ENST00000494675 TSPAN14Q8NG11 270 aa2.64□□□□□ -1.99
LRIF1-203ENST00000494675 CFAP61Q8NHU2 1237 aa2.64□□□□□ -1.99
LRIF1-203ENST00000494675 ZFAND2BQ8WV99 257 aa2.64□□□□□ -1.99
LRIF1-203ENST00000494675 MTERF3Q96E29 417 aa2.64□□□□□ -1.99
LRIF1-203ENST00000494675 SPACA9Q96E40 222 aaPredicted RBP2.64□□□□□ -1.99
LRIF1-203ENST00000494675 ABHD8Q96I13 439 aa2.64□□□□□ -1.99
LRIF1-203ENST00000494675 FAM84BQ96KN1 310 aaPredicted RBP2.64□□□□□ -1.99
LRIF1-203ENST00000494675 ZNF582Q96NG8 517 aaPredicted RBP2.64□□□□□ -1.99
LRIF1-203ENST00000494675 OR6C1Q96RD1 312 aa2.64□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms