RNA–Protein interactions for RNA: ENST00000494646.1

MSH5-218, Transcript of mutS homolog 5, humanhuman

TSL 4

Gene MSH5, Length 528 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-218ENST00000494646 SRP72O76094 671 aaKnown RBP9.4□□□□□ -0.9
MSH5-218ENST00000494646 STK17BO94768 372 aa9.4□□□□□ -0.9
MSH5-218ENST00000494646 PRAMEF1O95521 474 aa9.4□□□□□ -0.9
MSH5-218ENST00000494646 METTL18O95568 372 aa9.4□□□□□ -0.9
MSH5-218ENST00000494646 C9P02748 559 aa9.4□□□□□ -0.9
MSH5-218ENST00000494646 FAM87AP0C7U9 286 aa9.4□□□□□ -0.9
MSH5-218ENST00000494646 PRSS56P0CW18 603 aa9.4□□□□□ -0.9
MSH5-218ENST00000494646 ZNF28P17035 718 aa9.4□□□□□ -0.9
MSH5-218ENST00000494646 PTPN7P35236 360 aa9.4□□□□□ -0.9
MSH5-218ENST00000494646 CDKN1CP49918 316 aaPredicted RBP9.4□□□□□ -0.9
MSH5-218ENST00000494646 PPP1CAP62136 330 aa9.4□□□□□ -0.9
MSH5-218ENST00000494646 XIAPP98170 497 aa9.4□□□□□ -0.9
MSH5-218ENST00000494646 NFKB2Q00653 900 aa9.4□□□□□ -0.9
MSH5-218ENST00000494646 KIF5AQ12840 1032 aa9.4□□□□□ -0.9
MSH5-218ENST00000494646 NFATC3Q12968 1075 aa9.4□□□□□ -0.9
MSH5-218ENST00000494646 LONRF2Q1L5Z9 754 aa9.4□□□□□ -0.9
MSH5-218ENST00000494646 METRNLQ641Q3 311 aa9.4□□□□□ -0.9
MSH5-218ENST00000494646 DENND5AQ6IQ26 1287 aa9.4□□□□□ -0.9
MSH5-218ENST00000494646 DUS1LQ6P1R4 473 aaKnown RBP9.4□□□□□ -0.9
MSH5-218ENST00000494646 TMEM139Q8IV31 216 aa9.4□□□□□ -0.9
MSH5-218ENST00000494646 NLGN4XQ8N0W4 816 aa9.4□□□□□ -0.9
MSH5-218ENST00000494646 FAM71DQ8N9W8 422 aa9.4□□□□□ -0.9
MSH5-218ENST00000494646 NLGN4YQ8NFZ3 816 aaPredicted RBP9.4□□□□□ -0.9
MSH5-218ENST00000494646 SPATA13Q96N96 652 aa9.4□□□□□ -0.9
MSH5-218ENST00000494646 TEFMQ96QE5 360 aaKnown RBP9.4□□□□□ -0.9
MSH5-218ENST00000494646 OR6C1Q96RD1 312 aa9.4□□□□□ -0.9
MSH5-218ENST00000494646 ZCCHC2Q9C0B9 1178 aaKnown RBP9.4□□□□□ -0.9
MSH5-218ENST00000494646 WWP1Q9H0M0 922 aa9.4□□□□□ -0.9
MSH5-218ENST00000494646 POT1Q9NUX5 634 aa9.4□□□□□ -0.9
MSH5-218ENST00000494646 IMP3Q9NV31 184 aaKnown RBP9.4□□□□□ -0.9
MSH5-218ENST00000494646 PIH1D1Q9NWS0 290 aaKnown RBP9.4□□□□□ -0.9
MSH5-218ENST00000494646 CRLS1Q9UJA2 301 aa9.4□□□□□ -0.9
MSH5-218ENST00000494646 R3HDM2Q9Y2K5 976 aaKnown RBP9.4□□□□□ -0.9
MSH5-218ENST00000494646 DNMT3AQ9Y6K1 912 aaPredicted RBP9.4□□□□□ -0.9
MSH5-218ENST00000494646 MN1Q10571 1320 aaPredicted RBP9.39□□□□□ -0.91
MSH5-218ENST00000494646 MGAT4DA6NG13 374 aa9.39□□□□□ -0.91
MSH5-218ENST00000494646 SGTAO43765 313 aa9.39□□□□□ -0.91
MSH5-218ENST00000494646 CRTAMO95727 393 aa9.39□□□□□ -0.91
MSH5-218ENST00000494646 ITGB2P05107 769 aa9.39□□□□□ -0.91
MSH5-218ENST00000494646 MAP4P27816 1152 aaKnown RBP9.39□□□□□ -0.91
MSH5-218ENST00000494646 MC4RP32245 332 aa9.39□□□□□ -0.91
MSH5-218ENST00000494646 GDF10P55107 478 aa9.39□□□□□ -0.91
MSH5-218ENST00000494646 DMPKQ09013 629 aa9.39□□□□□ -0.91
MSH5-218ENST00000494646 PLCL1Q15111 1095 aa9.39□□□□□ -0.91
MSH5-218ENST00000494646 PARP6Q2NL67 630 aa9.39□□□□□ -0.91
MSH5-218ENST00000494646 C16orf46Q6P387 395 aa9.39□□□□□ -0.91
MSH5-218ENST00000494646 ARHGEF18Q6ZSZ5 1173 aa9.39□□□□□ -0.91
MSH5-218ENST00000494646 RASGRP3Q8IV61 690 aa9.39□□□□□ -0.91
MSH5-218ENST00000494646 RBM12BQ8IXT5 1001 aaKnown RBP9.39□□□□□ -0.91
MSH5-218ENST00000494646 SYCE1Q8N0S2 351 aa9.39□□□□□ -0.91
MSH5-218ENST00000494646 LILRA3Q8N6C8 439 aaPredicted RBP9.39□□□□□ -0.91
MSH5-218ENST00000494646 UBL4BQ8N7F7 174 aa9.39□□□□□ -0.91
MSH5-218ENST00000494646 DCUN1D1Q96GG9 259 aa9.39□□□□□ -0.91
MSH5-218ENST00000494646 ZDHHC12Q96GR4 267 aa9.39□□□□□ -0.91
MSH5-218ENST00000494646 C12orf66Q96MD2 445 aa9.39□□□□□ -0.91
MSH5-218ENST00000494646 ZPBPQ9BS86 351 aa9.39□□□□□ -0.91
MSH5-218ENST00000494646 GPN2Q9H9Y4 310 aaPredicted RBP9.39□□□□□ -0.91
MSH5-218ENST00000494646 HRASLS2Q9NWW9 162 aa9.39□□□□□ -0.91
MSH5-218ENST00000494646 SIDT1Q9NXL6 827 aaKnown RBP9.39□□□□□ -0.91
MSH5-218ENST00000494646 IL17BQ9UHF5 180 aa9.39□□□□□ -0.91
MSH5-218ENST00000494646 MRPS18BQ9Y676 258 aaKnown RBP9.39□□□□□ -0.91
MSH5-218ENST00000494646 CCDC88CQ9P219 2028 aa9.38□□□□□ -0.91
MSH5-218ENST00000494646 IGHV5-51A0A0C4DH38 117 aa9.38□□□□□ -0.91
MSH5-218ENST00000494646 CCDC78A2IDD5 438 aa9.38□□□□□ -0.91
MSH5-218ENST00000494646 LDB2O43679 373 aa9.38□□□□□ -0.91
MSH5-218ENST00000494646 SPAG6O75602 509 aa9.38□□□□□ -0.91
MSH5-218ENST00000494646 KIAA0754O94854 1291 aa9.38□□□□□ -0.91
MSH5-218ENST00000494646 ANKRD34CP0C6C1 535 aa9.38□□□□□ -0.91
MSH5-218ENST00000494646 PRKAR1AP10644 381 aa9.38□□□□□ -0.91
MSH5-218ENST00000494646 ITGB6P18564 788 aa9.38□□□□□ -0.91
MSH5-218ENST00000494646 F8A1P23610 371 aa9.38□□□□□ -0.91
MSH5-218ENST00000494646 CAPZBP47756 277 aa9.38□□□□□ -0.91
MSH5-218ENST00000494646 ARCN1P48444 511 aaKnown RBP9.38□□□□□ -0.91
MSH5-218ENST00000494646 KRT33BQ14525 404 aa9.38□□□□□ -0.91
MSH5-218ENST00000494646 KCNAB1Q14722 419 aa9.38□□□□□ -0.91
MSH5-218ENST00000494646 POU6F1Q14863 301 aa9.38□□□□□ -0.91
MSH5-218ENST00000494646 ZRANB3Q5FWF4 1079 aa9.38□□□□□ -0.91
MSH5-218ENST00000494646 FBXO38Q6PIJ6 1188 aa9.38□□□□□ -0.91
MSH5-218ENST00000494646 CERS6Q6ZMG9 384 aa9.38□□□□□ -0.91
MSH5-218ENST00000494646 TAS2R42Q7RTR8 314 aa9.38□□□□□ -0.91
MSH5-218ENST00000494646 PRICKLE2Q7Z3G6 844 aa9.38□□□□□ -0.91
MSH5-218ENST00000494646 SNX20Q7Z614 316 aa9.38□□□□□ -0.91
MSH5-218ENST00000494646 TTC13Q8NBP0 860 aa9.38□□□□□ -0.91
MSH5-218ENST00000494646 GALNT6Q8NCL4 622 aa9.38□□□□□ -0.91
MSH5-218ENST00000494646 PHC3Q8NDX5 983 aa9.38□□□□□ -0.91
MSH5-218ENST00000494646 OR2L2Q8NH16 312 aa9.38□□□□□ -0.91
MSH5-218ENST00000494646 KLHL6Q8WZ60 621 aa9.38□□□□□ -0.91
MSH5-218ENST00000494646 ZNF514Q96K75 400 aaPredicted RBP9.38□□□□□ -0.91
MSH5-218ENST00000494646 DNAJC1Q96KC8 554 aaKnown RBP9.38□□□□□ -0.91
MSH5-218ENST00000494646 FERD3LQ96RJ6 166 aa9.38□□□□□ -0.91
MSH5-218ENST00000494646 NRTNQ99748 197 aa9.38□□□□□ -0.91
MSH5-218ENST00000494646 MAP3K3Q99759 626 aa9.38□□□□□ -0.91
MSH5-218ENST00000494646 TMEM121Q9BTD3 319 aa9.38□□□□□ -0.91
MSH5-218ENST00000494646 ZNF768Q9H5H4 540 aaKnown RBP9.38□□□□□ -0.91
MSH5-218ENST00000494646 ACSL5Q9ULC5 683 aa9.38□□□□□ -0.91
MSH5-218ENST00000494646 TMEM184BQ9Y519 407 aaPredicted RBP9.38□□□□□ -0.91
MSH5-218ENST00000494646 SPENQ96T58 3664 aaKnown RBP9.37□□□□□ -0.91
MSH5-218ENST00000494646 OR6C74A6NCV1 312 aa9.37□□□□□ -0.91
MSH5-218ENST00000494646 ZNF891A8MT65 544 aaPredicted RBP9.37□□□□□ -0.91
MSH5-218ENST00000494646 AGAP14A8MT82 685 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms