RNA–Protein interactions for RNA: ENST00000494333.1

RIF1-211, Transcript of replication timing regulatory factor 1, humanhuman

TSL 3

Gene RIF1, Length 743 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-211ENST00000494333 FUBP1Q96AE4 644 aaKnown RBP8.06□□□□□ -1.12
RIF1-211ENST00000494333 SCRN2Q96FV2 425 aa8.06□□□□□ -1.12
RIF1-211ENST00000494333 TBATAQ96M53 351 aa8.06□□□□□ -1.12
RIF1-211ENST00000494333 TSGA13Q96PP4 275 aa8.06□□□□□ -1.12
RIF1-211ENST00000494333 RNF157Q96PX1 679 aa8.06□□□□□ -1.12
RIF1-211ENST00000494333 BOCQ9BWV1 1114 aa8.06□□□□□ -1.12
RIF1-211ENST00000494333 MAK16Q9BXY0 300 aaKnown RBP8.06□□□□□ -1.12
RIF1-211ENST00000494333 TRIM5Q9C035 493 aa8.06□□□□□ -1.12
RIF1-211ENST00000494333 POLR1EQ9GZS1 481 aaKnown RBP8.06□□□□□ -1.12
RIF1-211ENST00000494333 MRPL40Q9NQ50 206 aaKnown RBP8.06□□□□□ -1.12
RIF1-211ENST00000494333 ASH2LQ9UBL3 628 aa8.06□□□□□ -1.12
RIF1-211ENST00000494333 MOSPD1Q9UJG1 213 aa8.06□□□□□ -1.12
RIF1-211ENST00000494333 PADI4Q9UM07 663 aa8.06□□□□□ -1.12
RIF1-211ENST00000494333 TTLL3Q9Y4R7 772 aa8.06□□□□□ -1.12
RIF1-211ENST00000494333 PCDHB1Q9Y5F3 818 aa8.06□□□□□ -1.12
RIF1-211ENST00000494333 RAI2Q9Y5P3 530 aa8.06□□□□□ -1.12
RIF1-211ENST00000494333 GOLGA4Q13439 2230 aaKnown RBP8.05□□□□□ -1.12
RIF1-211ENST00000494333 ARID1BQ8NFD5 2236 aaPredicted RBP8.05□□□□□ -1.12
RIF1-211ENST00000494333 FRYQ5TBA9 3013 aa8.05□□□□□ -1.12
RIF1-211ENST00000494333 A0A0U1RQS6 177 aa8.05□□□□□ -1.12
RIF1-211ENST00000494333 LRRD1A4D1F6 860 aa8.05□□□□□ -1.12
RIF1-211ENST00000494333 NPIPB15A6NHN6 443 aaPredicted RBP8.05□□□□□ -1.12
RIF1-211ENST00000494333 USP12O75317 370 aa8.05□□□□□ -1.12
RIF1-211ENST00000494333 CSO75390 466 aaKnown RBP8.05□□□□□ -1.12
RIF1-211ENST00000494333 HEXIM1O94992 359 aaKnown RBP8.05□□□□□ -1.12
RIF1-211ENST00000494333 HOXC4P09017 264 aaPredicted RBP8.05□□□□□ -1.12
RIF1-211ENST00000494333 TNNT1P13805 278 aa8.05□□□□□ -1.12
RIF1-211ENST00000494333 CCNB1P14635 433 aa8.05□□□□□ -1.12
RIF1-211ENST00000494333 LHCGRP22888 699 aa8.05□□□□□ -1.12
RIF1-211ENST00000494333 KELP23276 732 aa8.05□□□□□ -1.12
RIF1-211ENST00000494333 MAN1A1P33908 653 aa8.05□□□□□ -1.12
RIF1-211ENST00000494333 ARHGAP25P42331 645 aa8.05□□□□□ -1.12
RIF1-211ENST00000494333 EPHB1P54762 984 aa8.05□□□□□ -1.12
RIF1-211ENST00000494333 KIAA1024LP59773 190 aa8.05□□□□□ -1.12
RIF1-211ENST00000494333 DSC2Q02487 901 aa8.05□□□□□ -1.12
RIF1-211ENST00000494333 GBE1Q04446 702 aa8.05□□□□□ -1.12
RIF1-211ENST00000494333 COL28A1Q2UY09 1125 aa8.05□□□□□ -1.12
RIF1-211ENST00000494333 LVRNQ6Q4G3 990 aa8.05□□□□□ -1.12
RIF1-211ENST00000494333 Q6ZVL8 140 aa8.05□□□□□ -1.12
RIF1-211ENST00000494333 USP45Q70EL2 814 aa8.05□□□□□ -1.12
RIF1-211ENST00000494333 HSD11B1LQ7Z5J1 315 aa8.05□□□□□ -1.12
RIF1-211ENST00000494333 TAF8Q7Z7C8 310 aa8.05□□□□□ -1.12
RIF1-211ENST00000494333 TSPAN33Q86UF1 283 aa8.05□□□□□ -1.12
RIF1-211ENST00000494333 GKN2Q86XP6 184 aa8.05□□□□□ -1.12
RIF1-211ENST00000494333 CNGA4Q8IV77 575 aa8.05□□□□□ -1.12
RIF1-211ENST00000494333 RHOT2Q8IXI1 618 aa8.05□□□□□ -1.12
RIF1-211ENST00000494333 PELI3Q8N2H9 469 aa8.05□□□□□ -1.12
RIF1-211ENST00000494333 CBARPQ8N350 705 aaPredicted RBP8.05□□□□□ -1.12
RIF1-211ENST00000494333 SDR16C5Q8N3Y7 309 aa8.05□□□□□ -1.12
RIF1-211ENST00000494333 OR1E3Q8WZA6 343 aa8.05□□□□□ -1.12
RIF1-211ENST00000494333 MAML1Q92585 1016 aa8.05□□□□□ -1.12
RIF1-211ENST00000494333 FAF2Q96CS3 445 aa8.05□□□□□ -1.12
RIF1-211ENST00000494333 NUS1Q96E22 293 aa8.05□□□□□ -1.12
RIF1-211ENST00000494333 SIGLEC10Q96LC7 697 aa8.05□□□□□ -1.12
RIF1-211ENST00000494333 COQ10AQ96MF6 247 aa8.05□□□□□ -1.12
RIF1-211ENST00000494333 RBM15Q96T37 977 aaKnown RBP eCLIP8.05□□□□□ -1.122e-8■■■□□ 16.8
RIF1-211ENST00000494333 WDR26Q9H7D7 661 aa8.05□□□□□ -1.12
RIF1-211ENST00000494333 HAUS2Q9NVX0 235 aa8.05□□□□□ -1.12
RIF1-211ENST00000494333 KCTD5Q9NXV2 234 aa8.05□□□□□ -1.12
RIF1-211ENST00000494333 DTLQ9NZJ0 730 aa8.05□□□□□ -1.12
RIF1-211ENST00000494333 GPR34Q9UPC5 381 aa8.05□□□□□ -1.12
RIF1-211ENST00000494333 PPIL1Q9Y3C6 166 aa8.05□□□□□ -1.12
RIF1-211ENST00000494333 HEY1Q9Y5J3 304 aa8.05□□□□□ -1.12
RIF1-211ENST00000494333 TNPO3Q9Y5L0 923 aaKnown RBP8.05□□□□□ -1.12
RIF1-211ENST00000494333 DGKBQ9Y6T7 804 aa8.05□□□□□ -1.12
RIF1-211ENST00000494333 USP24Q9UPU5 2620 aa8.05□□□□□ -1.12
RIF1-211ENST00000494333 IGF2RP11717 2491 aa8.05□□□□□ -1.12
RIF1-211ENST00000494333 KNTC1P50748 2209 aa8.05□□□□□ -1.12
RIF1-211ENST00000494333 PTPRBP23467 1997 aa8.04□□□□□ -1.12
RIF1-211ENST00000494333 KMT2BQ9UMN6 2715 aaPredicted RBP8.04□□□□□ -1.12
RIF1-211ENST00000494333 A0A087WV48 116 aa8.04□□□□□ -1.12
RIF1-211ENST00000494333 A0A0J9YYE9 177 aa8.04□□□□□ -1.12
RIF1-211ENST00000494333 GOLGA6CA6NDK9 693 aa8.04□□□□□ -1.12
RIF1-211ENST00000494333 GOLGA6BA6NDN3 693 aa8.04□□□□□ -1.12
RIF1-211ENST00000494333 KCNK1O00180 336 aa8.04□□□□□ -1.12
RIF1-211ENST00000494333 PSMD11O00231 422 aa8.04□□□□□ -1.12
RIF1-211ENST00000494333 GSTA4O15217 222 aa8.04□□□□□ -1.12
RIF1-211ENST00000494333 TLX3O43711 291 aaPredicted RBP8.04□□□□□ -1.12
RIF1-211ENST00000494333 BRINP1O60477 761 aa8.04□□□□□ -1.12
RIF1-211ENST00000494333 JCHAINP01591 159 aa8.04□□□□□ -1.12
RIF1-211ENST00000494333 TRBC1P01850 177 aa8.04□□□□□ -1.12
RIF1-211ENST00000494333 AMY2AP04746 511 aa8.04□□□□□ -1.12
RIF1-211ENST00000494333 GOLGA6DP0CG33 693 aa8.04□□□□□ -1.12
RIF1-211ENST00000494333 KRT10P13645 584 aa8.04□□□□□ -1.12
RIF1-211ENST00000494333 AMY2BP19961 511 aa8.04□□□□□ -1.12
RIF1-211ENST00000494333 EIF2S3P41091 472 aaKnown RBP8.04□□□□□ -1.12
RIF1-211ENST00000494333 TBX2Q13207 712 aaPredicted RBP8.04□□□□□ -1.12
RIF1-211ENST00000494333 ZNF460Q14592 562 aa8.04□□□□□ -1.12
RIF1-211ENST00000494333 IHHQ14623 411 aa8.04□□□□□ -1.12
RIF1-211ENST00000494333 GPR19Q15760 415 aa8.04□□□□□ -1.12
RIF1-211ENST00000494333 ISXQ2M1V0 245 aa8.04□□□□□ -1.12
RIF1-211ENST00000494333 ODF2Q5BJF6 829 aa8.04□□□□□ -1.12
RIF1-211ENST00000494333 ETV3LQ6ZN32 361 aa8.04□□□□□ -1.12
RIF1-211ENST00000494333 TECPR1Q7Z6L1 1165 aa8.04□□□□□ -1.12
RIF1-211ENST00000494333 RHOT1Q8IXI2 618 aa8.04□□□□□ -1.12
RIF1-211ENST00000494333 CCDC13Q8IYE1 715 aa8.04□□□□□ -1.12
RIF1-211ENST00000494333 PLD5Q8N7P1 536 aa8.04□□□□□ -1.12
RIF1-211ENST00000494333 ARL10Q8N8L6 244 aa8.04□□□□□ -1.12
RIF1-211ENST00000494333 FAM46DQ8NEK8 389 aa8.04□□□□□ -1.12
RIF1-211ENST00000494333 CCL4L1Q8NHW4 92 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms