RNA–Protein interactions for RNA: ENST00000494185.1

LMNB1-207, Transcript of lamin B1, humanhuman

TSL 2

Gene LMNB1, Length 579 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-207ENST00000494185 TRPV2Q9Y5S1 764 aa2.33□□□□□ -2.04
LMNB1-207ENST00000494185 SNX5Q9Y5X3 404 aa2.33□□□□□ -2.04
LMNB1-207ENST00000494185 LOC102723996A0A087X1L8 192 aa2.32□□□□□ -2.04
LMNB1-207ENST00000494185 A0A0B4J293 547 aa2.32□□□□□ -2.04
LMNB1-207ENST00000494185 A0A1B0GUV1 79 aa2.32□□□□□ -2.04
LMNB1-207ENST00000494185 A0A1W2PR77 199 aa2.32□□□□□ -2.04
LMNB1-207ENST00000494185 C1orf226A1L170 272 aa2.32□□□□□ -2.04
LMNB1-207ENST00000494185 LILRA5A6NI73 299 aa2.32□□□□□ -2.04
LMNB1-207ENST00000494185 LRRC72A6NJI9 287 aa2.32□□□□□ -2.04
LMNB1-207ENST00000494185 C16orf97H3BN30 126 aa2.32□□□□□ -2.04
LMNB1-207ENST00000494185 CCDC188H7C350 402 aa2.32□□□□□ -2.04
LMNB1-207ENST00000494185 M0QZ24 198 aa2.32□□□□□ -2.04
LMNB1-207ENST00000494185 ADAMDEC1O15204 470 aa2.32□□□□□ -2.04
LMNB1-207ENST00000494185 WDR46O15213 610 aaKnown RBP2.32□□□□□ -2.04
LMNB1-207ENST00000494185 KCNN4O15554 427 aa2.32□□□□□ -2.04
LMNB1-207ENST00000494185 AVILO75366 819 aa2.32□□□□□ -2.04
LMNB1-207ENST00000494185 PDE9AO76083 593 aa2.32□□□□□ -2.04
LMNB1-207ENST00000494185 RECQL5O94762 991 aaPredicted RBP2.32□□□□□ -2.04
LMNB1-207ENST00000494185 TPPPO94811 219 aa2.32□□□□□ -2.04
LMNB1-207ENST00000494185 KDM4BO94953 1096 aa2.32□□□□□ -2.04
LMNB1-207ENST00000494185 SIX3O95343 332 aaPredicted RBP2.32□□□□□ -2.04
LMNB1-207ENST00000494185 FYNP06241 537 aa2.32□□□□□ -2.04
LMNB1-207ENST00000494185 CPT2P23786 658 aa2.32□□□□□ -2.04
LMNB1-207ENST00000494185 PTAFRP25105 342 aa2.32□□□□□ -2.04
LMNB1-207ENST00000494185 HOXC8P31273 242 aa2.32□□□□□ -2.04
LMNB1-207ENST00000494185 HOXC13P31276 330 aa2.32□□□□□ -2.04
LMNB1-207ENST00000494185 PDLIM4P50479 330 aa2.32□□□□□ -2.04
LMNB1-207ENST00000494185 CLCN3P51790 818 aa2.32□□□□□ -2.04
LMNB1-207ENST00000494185 GALCP54803 685 aa2.32□□□□□ -2.04
LMNB1-207ENST00000494185 TAS2R38P59533 333 aa2.32□□□□□ -2.04
LMNB1-207ENST00000494185 TAS2R40P59535 323 aa2.32□□□□□ -2.04
LMNB1-207ENST00000494185 CXCL9Q07325 125 aa2.32□□□□□ -2.04
LMNB1-207ENST00000494185 GRSF1Q12849 480 aaKnown RBP eCLIP2.32□□□□□ -2.04
LMNB1-207ENST00000494185 GRAPQ13588 217 aa2.32□□□□□ -2.04
LMNB1-207ENST00000494185 SETMARQ53H47 684 aaPredicted RBP2.32□□□□□ -2.04
LMNB1-207ENST00000494185 KRBOX4Q5JUW0 171 aa2.32□□□□□ -2.04
LMNB1-207ENST00000494185 RARS2Q5T160 578 aaKnown RBP2.32□□□□□ -2.04
LMNB1-207ENST00000494185 OTUD3Q5T2D3 398 aaPredicted RBP2.32□□□□□ -2.04
LMNB1-207ENST00000494185 PRSS57Q6UWY2 283 aa2.32□□□□□ -2.04
LMNB1-207ENST00000494185 FAM47EQ6ZV65 393 aa2.32□□□□□ -2.04
LMNB1-207ENST00000494185 DNAJB7Q7Z6W7 309 aaPredicted RBP2.32□□□□□ -2.04
LMNB1-207ENST00000494185 GLRX5Q86SX6 157 aa2.32□□□□□ -2.04
LMNB1-207ENST00000494185 TSPAN33Q86UF1 283 aa2.32□□□□□ -2.04
LMNB1-207ENST00000494185 CEP97Q8IW35 865 aa2.32□□□□□ -2.04
LMNB1-207ENST00000494185 DCUN1D3Q8IWE4 304 aa2.32□□□□□ -2.04
LMNB1-207ENST00000494185 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP2.32□□□□□ -2.04
LMNB1-207ENST00000494185 CEP57L1Q8IYX8 460 aa2.32□□□□□ -2.04
LMNB1-207ENST00000494185 CCAR2Q8N163 923 aaKnown RBP2.32□□□□□ -2.04
LMNB1-207ENST00000494185 PCDH20Q8N6Y1 951 aaKnown RBP2.32□□□□□ -2.04
LMNB1-207ENST00000494185 APPL2Q8NEU8 664 aa2.32□□□□□ -2.04
LMNB1-207ENST00000494185 OR2AK2Q8NG84 335 aa2.32□□□□□ -2.04
LMNB1-207ENST00000494185 OR6J1Q8NGC5 347 aa2.32□□□□□ -2.04
LMNB1-207ENST00000494185 KIF18AQ8NI77 898 aa2.32□□□□□ -2.04
LMNB1-207ENST00000494185 GDAP1Q8TB36 358 aa2.32□□□□□ -2.04
LMNB1-207ENST00000494185 LNX1Q8TBB1 728 aaPredicted RBP2.32□□□□□ -2.04
LMNB1-207ENST00000494185 TRPC4APQ8TEL6 797 aa2.32□□□□□ -2.04
LMNB1-207ENST00000494185 PTPMT1Q8WUK0 201 aaPredicted RBP2.32□□□□□ -2.04
LMNB1-207ENST00000494185 APBB2Q92870 758 aa2.32□□□□□ -2.04
LMNB1-207ENST00000494185 PIGTQ969N2 578 aa2.32□□□□□ -2.04
LMNB1-207ENST00000494185 ELMOD3Q96FG2 381 aa2.32□□□□□ -2.04
LMNB1-207ENST00000494185 ABHD8Q96I13 439 aa2.32□□□□□ -2.04
LMNB1-207ENST00000494185 CDHR1Q96JP9 859 aa2.32□□□□□ -2.04
LMNB1-207ENST00000494185 DUX3Q96PT4 197 aa2.32□□□□□ -2.04
LMNB1-207ENST00000494185 GPATCH1Q9BRR8 931 aaKnown RBP2.32□□□□□ -2.04
LMNB1-207ENST00000494185 SLC25A23Q9BV35 468 aa2.32□□□□□ -2.04
LMNB1-207ENST00000494185 DBNDD1Q9H9R9 158 aa2.32□□□□□ -2.04
LMNB1-207ENST00000494185 ZNF556Q9HAH1 456 aa2.32□□□□□ -2.04
LMNB1-207ENST00000494185 UPF2Q9HAU5 1272 aaKnown RBP2.32□□□□□ -2.04
LMNB1-207ENST00000494185 MBNL1Q9NR56 388 aaKnown RBP2.32□□□□□ -2.04
LMNB1-207ENST00000494185 SETD4Q9NVD3 440 aa2.32□□□□□ -2.04
LMNB1-207ENST00000494185 C1RLQ9NZP8 487 aa2.32□□□□□ -2.04
LMNB1-207ENST00000494185 AMACRQ9UHK6 382 aa2.32□□□□□ -2.04
LMNB1-207ENST00000494185 TUBE1Q9UJT0 475 aa2.32□□□□□ -2.04
LMNB1-207ENST00000494185 ACSL5Q9ULC5 683 aa2.32□□□□□ -2.04
LMNB1-207ENST00000494185 R3HDM2Q9Y2K5 976 aaKnown RBP2.32□□□□□ -2.04
LMNB1-207ENST00000494185 WBP11Q9Y2W2 641 aaKnown RBP2.32□□□□□ -2.04
LMNB1-207ENST00000494185 CMAHPQ9Y471 501 aa2.32□□□□□ -2.04
LMNB1-207ENST00000494185 TRIP12Q14669 1992 aaPredicted RBP2.32□□□□□ -2.04
LMNB1-207ENST00000494185 GPR75-ASB3A0A0A6YYF3 556 aa2.31□□□□□ -2.04
LMNB1-207ENST00000494185 A0A0G2JLW4 131 aa2.31□□□□□ -2.04
LMNB1-207ENST00000494185 LNP1A1A4G5 178 aa2.31□□□□□ -2.04
LMNB1-207ENST00000494185 ASPDHA6ND91 283 aa2.31□□□□□ -2.04
LMNB1-207ENST00000494185 TRIM64A6NGJ6 449 aa2.31□□□□□ -2.04
LMNB1-207ENST00000494185 TRIM64BA6NI03 449 aa2.31□□□□□ -2.04
LMNB1-207ENST00000494185 SRRM3A6NNA2 597 aaPredicted RBP2.31□□□□□ -2.04
LMNB1-207ENST00000494185 H3BQ06 376 aaPredicted RBP2.31□□□□□ -2.04
LMNB1-207ENST00000494185 PSMD14O00487 310 aa2.31□□□□□ -2.04
LMNB1-207ENST00000494185 CAPN9O14815 690 aa2.31□□□□□ -2.04
LMNB1-207ENST00000494185 ATP2A1O14983 1001 aa2.31□□□□□ -2.04
LMNB1-207ENST00000494185 MID1O15344 667 aa2.31□□□□□ -2.04
LMNB1-207ENST00000494185 ZNHIT1O43257 154 aa2.31□□□□□ -2.04
LMNB1-207ENST00000494185 HTATSF1O43719 755 aaKnown RBP2.31□□□□□ -2.04
LMNB1-207ENST00000494185 STX6O43752 255 aa2.31□□□□□ -2.04
LMNB1-207ENST00000494185 PSMD10O75832 226 aa2.31□□□□□ -2.04
LMNB1-207ENST00000494185 TGDSO95455 350 aa2.31□□□□□ -2.04
LMNB1-207ENST00000494185 C22orf31O95567 290 aa2.31□□□□□ -2.04
LMNB1-207ENST00000494185 CRYAAP02489 173 aa2.31□□□□□ -2.04
LMNB1-207ENST00000494185 ATP5BP06576 529 aaKnown RBP2.31□□□□□ -2.04
LMNB1-207ENST00000494185 FAM106CPP0CH98 169 aa2.31□□□□□ -2.04
LMNB1-207ENST00000494185 ACADLP28330 430 aa2.31□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms