RNA–Protein interactions for RNA: ENST00000494090.6

COL27A1-207, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL27A1, Length 5,329 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-207ENST00000494090 STBD1O95210 358 aa18.93■□□□□ 0.62
COL27A1-207ENST00000494090 ESR1P03372 595 aa18.93■□□□□ 0.62
COL27A1-207ENST00000494090 FAUP35544 74 aaKnown RBP18.93■□□□□ 0.62
COL27A1-207ENST00000494090 RPIAP49247 311 aa18.93■□□□□ 0.62
COL27A1-207ENST00000494090 PRKD1Q15139 912 aaPredicted RBP18.93■□□□□ 0.62
COL27A1-207ENST00000494090 TEAD4Q15561 434 aa18.93■□□□□ 0.62
COL27A1-207ENST00000494090 CWF19L1Q69YN2 538 aaKnown RBP18.93■□□□□ 0.62
COL27A1-207ENST00000494090 SULT1C3Q6IMI6 304 aa18.93■□□□□ 0.62
COL27A1-207ENST00000494090 CPNE8Q86YQ8 564 aa18.93■□□□□ 0.62
COL27A1-207ENST00000494090 MCEMP1Q8IX19 187 aa18.93■□□□□ 0.62
COL27A1-207ENST00000494090 CMASQ8NFW8 434 aaPredicted RBP18.93■□□□□ 0.62
COL27A1-207ENST00000494090 OR14C36Q8NHC7 312 aa18.93■□□□□ 0.62
COL27A1-207ENST00000494090 COX4I2Q96KJ9 171 aa18.93■□□□□ 0.62
COL27A1-207ENST00000494090 ELOVL2Q9NXB9 296 aa18.93■□□□□ 0.62
COL27A1-207ENST00000494090 IDH3BO43837 385 aa18.93■□□□□ 0.62
COL27A1-207ENST00000494090 C8GP07360 202 aa18.93■□□□□ 0.62
COL27A1-207ENST00000494090 GIMD1P0DJR0 217 aa18.93■□□□□ 0.62
COL27A1-207ENST00000494090 NAE1Q13564 534 aa18.93■□□□□ 0.62
COL27A1-207ENST00000494090 ZBTB46Q86UZ6 589 aa18.93■□□□□ 0.62
COL27A1-207ENST00000494090 DCAKDQ8WVC6 231 aa18.93■□□□□ 0.62
COL27A1-207ENST00000494090 SMURF2Q9HAU4 748 aa18.93■□□□□ 0.62
COL27A1-207ENST00000494090 TMEM138Q9NPI0 162 aa18.93■□□□□ 0.62
COL27A1-207ENST00000494090 TRMT13Q9NUP7 481 aaKnown RBP18.93■□□□□ 0.62
COL27A1-207ENST00000494090 PIK3C2AO00443 1686 aa18.93■□□□□ 0.62
COL27A1-207ENST00000494090 STX16-NPEPL1H3BU86 382 aa18.93■□□□□ 0.62
COL27A1-207ENST00000494090 PSMD11O00231 422 aa18.93■□□□□ 0.62
COL27A1-207ENST00000494090 STX16O14662 325 aa18.93■□□□□ 0.62
COL27A1-207ENST00000494090 PIP5K1BO14986 540 aa18.93■□□□□ 0.62
COL27A1-207ENST00000494090 KERAO60938 352 aa18.93■□□□□ 0.62
COL27A1-207ENST00000494090 METTL18O95568 372 aa18.93■□□□□ 0.62
COL27A1-207ENST00000494090 SLC35G6P0C7Q6 338 aa18.93■□□□□ 0.62
COL27A1-207ENST00000494090 PRKAR1AP10644 381 aa18.93■□□□□ 0.62
COL27A1-207ENST00000494090 HSPA7P48741 367 aa18.93■□□□□ 0.62
COL27A1-207ENST00000494090 SIM2Q14190 667 aaPredicted RBP18.93■□□□□ 0.62
COL27A1-207ENST00000494090 ZSCAN2Q7Z7L9 614 aaPredicted RBP18.93■□□□□ 0.62
COL27A1-207ENST00000494090 CDH24Q86UP0 819 aa18.93■□□□□ 0.62
COL27A1-207ENST00000494090 SVOPLQ8N434 492 aa18.93■□□□□ 0.62
COL27A1-207ENST00000494090 CDADC1Q9BWV3 514 aa18.93■□□□□ 0.62
COL27A1-207ENST00000494090 BRINP2Q9C0B6 783 aa18.93■□□□□ 0.62
COL27A1-207ENST00000494090 GPR88Q9GZN0 384 aa18.93■□□□□ 0.62
COL27A1-207ENST00000494090 HEBP2Q9Y5Z4 205 aa18.93■□□□□ 0.62
COL27A1-207ENST00000494090 FAM149AA5PLN7 773 aa18.93■□□□□ 0.62
COL27A1-207ENST00000494090 ARL5CA6NH57 179 aa18.93■□□□□ 0.62
COL27A1-207ENST00000494090 PRPS2P11908 318 aa18.93■□□□□ 0.62
COL27A1-207ENST00000494090 ADGRE1Q14246 886 aa18.93■□□□□ 0.62
COL27A1-207ENST00000494090 RFTN1Q14699 578 aaPredicted RBP18.93■□□□□ 0.62
COL27A1-207ENST00000494090 SH3PXD2AQ5TCZ1 1133 aa18.93■□□□□ 0.62
COL27A1-207ENST00000494090 FBXO42Q6P3S6 717 aa18.93■□□□□ 0.62
COL27A1-207ENST00000494090 JAZF1Q86VZ6 243 aa18.93■□□□□ 0.62
COL27A1-207ENST00000494090 CKLFQ9UBR5 152 aa18.93■□□□□ 0.62
COL27A1-207ENST00000494090 GTF2IRD1Q9UHL9 959 aa18.93■□□□□ 0.62
COL27A1-207ENST00000494090 ASB3Q9Y575 518 aa18.93■□□□□ 0.62
COL27A1-207ENST00000494090 MYBPHLA2RUH7 354 aa18.92■□□□□ 0.62
COL27A1-207ENST00000494090 XKRYO14609 159 aa18.92■□□□□ 0.62
COL27A1-207ENST00000494090 GABRDO14764 452 aa18.92■□□□□ 0.62
COL27A1-207ENST00000494090 KHDRBS3O75525 346 aaKnown RBP18.92■□□□□ 0.62
COL27A1-207ENST00000494090 VARSP26640 1264 aaKnown RBP18.92■□□□□ 0.62
COL27A1-207ENST00000494090 SCNN1AP37088 669 aa18.92■□□□□ 0.62
COL27A1-207ENST00000494090 ARFIP1P53367 373 aa18.92■□□□□ 0.62
COL27A1-207ENST00000494090 TAS2R39P59534 338 aa18.92■□□□□ 0.62
COL27A1-207ENST00000494090 C2orf80Q0P641 193 aa18.92■□□□□ 0.62
COL27A1-207ENST00000494090 SLC34A3Q8N130 599 aa18.92■□□□□ 0.62
COL27A1-207ENST00000494090 RBM7Q9Y580 266 aaKnown RBP18.92■□□□□ 0.62
COL27A1-207ENST00000494090 PTGER3P43115 390 aa18.92■□□□□ 0.62
COL27A1-207ENST00000494090 ZNF730Q6ZMV8 503 aa18.92■□□□□ 0.62
COL27A1-207ENST00000494090 ZNF554Q86TJ5 538 aa18.92■□□□□ 0.62
COL27A1-207ENST00000494090 MPP5Q8N3R9 675 aa18.92■□□□□ 0.62
COL27A1-207ENST00000494090 PRICKLE1Q96MT3 831 aaPredicted RBP18.92■□□□□ 0.62
COL27A1-207ENST00000494090 INTS10Q9NVR2 710 aaKnown RBP18.92■□□□□ 0.62
COL27A1-207ENST00000494090 SNX10Q9Y5X0 201 aa18.92■□□□□ 0.62
COL27A1-207ENST00000494090 ZFP37Q9Y6Q3 630 aaPredicted RBP18.92■□□□□ 0.62
COL27A1-207ENST00000494090 OR5F1O95221 314 aa18.92■□□□□ 0.62
COL27A1-207ENST00000494090 STXBP1P61764 594 aaKnown RBP18.92■□□□□ 0.62
COL27A1-207ENST00000494090 VARS2Q5ST30 1063 aaKnown RBP18.92■□□□□ 0.62
COL27A1-207ENST00000494090 ATG14Q6ZNE5 492 aa18.92■□□□□ 0.62
COL27A1-207ENST00000494090 NTAN1Q96AB6 310 aa18.92■□□□□ 0.62
COL27A1-207ENST00000494090 PDCD10Q9BUL8 212 aa18.92■□□□□ 0.62
COL27A1-207ENST00000494090 DNAJB4Q9UDY4 337 aa18.92■□□□□ 0.62
COL27A1-207ENST00000494090 WASF2Q9Y6W5 498 aa18.92■□□□□ 0.62
COL27A1-207ENST00000494090 FAM92AA1XBS5 289 aa18.92■□□□□ 0.62
COL27A1-207ENST00000494090 CCL22O00626 93 aa18.92■□□□□ 0.62
COL27A1-207ENST00000494090 SMPD1P17405 629 aa18.92■□□□□ 0.62
COL27A1-207ENST00000494090 HKDC1Q2TB90 917 aa18.92■□□□□ 0.62
COL27A1-207ENST00000494090 C12orf42Q96LP6 360 aa18.92■□□□□ 0.62
COL27A1-207ENST00000494090 NMUR1Q9HB89 426 aa18.92■□□□□ 0.62
COL27A1-207ENST00000494090 OR4F21O95013 312 aa18.91■□□□□ 0.62
COL27A1-207ENST00000494090 ANXA4P09525 319 aaPredicted RBP18.91■□□□□ 0.62
COL27A1-207ENST00000494090 AQP4P55087 323 aa18.91■□□□□ 0.62
COL27A1-207ENST00000494090 CD99L2Q8TCZ2 262 aa18.91■□□□□ 0.62
COL27A1-207ENST00000494090 RAB11FIP5Q9BXF6 653 aa18.91■□□□□ 0.62
COL27A1-207ENST00000494090 SSNA1O43805 119 aa18.91■□□□□ 0.62
COL27A1-207ENST00000494090 AQP1P29972 269 aa18.91■□□□□ 0.62
COL27A1-207ENST00000494090 SLC1A2P43004 574 aa18.91■□□□□ 0.62
COL27A1-207ENST00000494090 ZNF155Q12901 538 aaPredicted RBP18.91■□□□□ 0.62
COL27A1-207ENST00000494090 ZNF460Q14592 562 aa18.91■□□□□ 0.62
COL27A1-207ENST00000494090 PLA2G4EQ3MJ16 856 aa18.91■□□□□ 0.62
COL27A1-207ENST00000494090 ATCAYQ86WG3 371 aa18.91■□□□□ 0.62
COL27A1-207ENST00000494090 FBXL18Q96ME1 805 aa18.91■□□□□ 0.62
COL27A1-207ENST00000494090 FCRL5Q96RD9 977 aa18.91■□□□□ 0.62
COL27A1-207ENST00000494090 RASSF1Q9NS23 344 aa18.91■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms