RNA–Protein interactions for RNA: ENST00000493955.1

SMC2-205, Transcript of structural maintenance of chromosomes 2, humanhuman

TSL 1 (best)

Gene SMC2, Length 1,408 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC2-205ENST00000493955 SLMAPQ14BN4 828 aa5.99□□□□□ -1.45
SMC2-205ENST00000493955 CDC37Q16543 378 aaPredicted RBP5.99□□□□□ -1.45
SMC2-205ENST00000493955 ZRANB3Q5FWF4 1079 aa5.99□□□□□ -1.45
SMC2-205ENST00000493955 FAM109BQ6ICB4 259 aaPredicted RBP5.99□□□□□ -1.45
SMC2-205ENST00000493955 ZBTB49Q6ZSB9 765 aa5.99□□□□□ -1.45
SMC2-205ENST00000493955 MSANTD1Q6ZTZ1 278 aa5.99□□□□□ -1.45
SMC2-205ENST00000493955 PIWIL3Q7Z3Z3 882 aaKnown RBP5.99□□□□□ -1.45
SMC2-205ENST00000493955 SPATA19Q7Z5L4 167 aa5.99□□□□□ -1.45
SMC2-205ENST00000493955 SIX6OS1Q8N1H7 587 aa5.99□□□□□ -1.45
SMC2-205ENST00000493955 TMCO5AQ8N6Q1 288 aa5.99□□□□□ -1.45
SMC2-205ENST00000493955 MSANTD4Q8NCY6 345 aa5.99□□□□□ -1.45
SMC2-205ENST00000493955 OR2AJ1Q8NGZ0 328 aa5.99□□□□□ -1.45
SMC2-205ENST00000493955 ZFAND2BQ8WV99 257 aa5.99□□□□□ -1.45
SMC2-205ENST00000493955 WASF1Q92558 559 aa5.99□□□□□ -1.45
SMC2-205ENST00000493955 EXT2Q93063 718 aa5.99□□□□□ -1.45
SMC2-205ENST00000493955 SPSB1Q96BD6 273 aa5.99□□□□□ -1.45
SMC2-205ENST00000493955 C16orf70Q9BSU1 422 aa5.99□□□□□ -1.45
SMC2-205ENST00000493955 DCLK3Q9C098 648 aa5.99□□□□□ -1.45
SMC2-205ENST00000493955 DNAI2Q9GZS0 605 aa5.99□□□□□ -1.45
SMC2-205ENST00000493955 SPRTNQ9H040 489 aaPredicted RBP5.99□□□□□ -1.45
SMC2-205ENST00000493955 EBF3Q9H4W6 596 aa5.99□□□□□ -1.45
SMC2-205ENST00000493955 TBC1D17Q9HA65 648 aa5.99□□□□□ -1.45
SMC2-205ENST00000493955 HHATLQ9HCP6 504 aa5.99□□□□□ -1.45
SMC2-205ENST00000493955 DPP3Q9NY33 737 aa5.99□□□□□ -1.45
SMC2-205ENST00000493955 MTRRQ9UBK8 725 aa5.99□□□□□ -1.45
SMC2-205ENST00000493955 PTPRCP08575 1304 aa5.98□□□□□ -1.45
SMC2-205ENST00000493955 A0A0U1RQJ8 604 aa5.98□□□□□ -1.45
SMC2-205ENST00000493955 A0A0U1RQK1 487 aa5.98□□□□□ -1.45
SMC2-205ENST00000493955 ZNF320A2RRD8 509 aa5.98□□□□□ -1.45
SMC2-205ENST00000493955 XRCC3O43542 346 aa5.98□□□□□ -1.45
SMC2-205ENST00000493955 SUPT20HL2P0C7V6 817 aa5.98□□□□□ -1.45
SMC2-205ENST00000493955 CASTP20810 708 aaKnown RBP5.98□□□□□ -1.45
SMC2-205ENST00000493955 CD81P60033 236 aa5.98□□□□□ -1.45
SMC2-205ENST00000493955 KLF9Q13886 244 aaPredicted RBP5.98□□□□□ -1.45
SMC2-205ENST00000493955 OASLQ15646 514 aaKnown RBP5.98□□□□□ -1.45
SMC2-205ENST00000493955 RAB6CQ53S08 254 aa5.98□□□□□ -1.45
SMC2-205ENST00000493955 ODF2Q5BJF6 829 aa5.98□□□□□ -1.45
SMC2-205ENST00000493955 C6orf136Q5SQH8 315 aa5.98□□□□□ -1.45
SMC2-205ENST00000493955 PIM3Q86V86 326 aa5.98□□□□□ -1.45
SMC2-205ENST00000493955 SRRM1Q8IYB3 904 aaKnown RBP5.98□□□□□ -1.45
SMC2-205ENST00000493955 C1orf52Q8N6N3 182 aaKnown RBP5.98□□□□□ -1.45
SMC2-205ENST00000493955 CORO2AQ92828 525 aa5.98□□□□□ -1.45
SMC2-205ENST00000493955 RPL36ALQ969Q0 106 aaKnown RBP5.98□□□□□ -1.45
SMC2-205ENST00000493955 FAM81BQ96LP2 452 aa5.98□□□□□ -1.45
SMC2-205ENST00000493955 INTS14Q96SY0 518 aa5.98□□□□□ -1.45
SMC2-205ENST00000493955 MRIQ9BWK5 157 aa5.98□□□□□ -1.45
SMC2-205ENST00000493955 RAB6CQ9H0N0 254 aa5.98□□□□□ -1.45
SMC2-205ENST00000493955 PTGFRNQ9P2B2 879 aa5.98□□□□□ -1.45
SMC2-205ENST00000493955 RHCGQ9UBD6 479 aa5.98□□□□□ -1.45
SMC2-205ENST00000493955 GRIP1Q9Y3R0 1128 aa5.98□□□□□ -1.45
SMC2-205ENST00000493955 SNX9Q9Y5X1 595 aa5.98□□□□□ -1.45
SMC2-205ENST00000493955 SNX5Q9Y5X3 404 aa5.98□□□□□ -1.45
SMC2-205ENST00000493955 FEZF1A0PJY2 475 aa5.97□□□□□ -1.45
SMC2-205ENST00000493955 OR2M5A3KFT3 312 aa5.97□□□□□ -1.45
SMC2-205ENST00000493955 SOCS2O14508 198 aa5.97□□□□□ -1.45
SMC2-205ENST00000493955 BAG2O95816 211 aa5.97□□□□□ -1.45
SMC2-205ENST00000493955 RAB40ALP0C0E4 278 aa5.97□□□□□ -1.45
SMC2-205ENST00000493955 IGHV4-30-4P0DP06 118 aa5.97□□□□□ -1.45
SMC2-205ENST00000493955 PSG1P11464 419 aa5.97□□□□□ -1.45
SMC2-205ENST00000493955 SSTR2P30874 369 aa5.97□□□□□ -1.45
SMC2-205ENST00000493955 PDE1BQ01064 536 aa5.97□□□□□ -1.45
SMC2-205ENST00000493955 YWHAHQ04917 246 aaPredicted RBP5.97□□□□□ -1.45
SMC2-205ENST00000493955 DHX34Q14147 1143 aaKnown RBP5.97□□□□□ -1.45
SMC2-205ENST00000493955 NFE2L1Q14494 772 aa5.97□□□□□ -1.45
SMC2-205ENST00000493955 C8orf82Q6P1X6 216 aaPredicted RBP5.97□□□□□ -1.45
SMC2-205ENST00000493955 MOXD1Q6UVY6 613 aa5.97□□□□□ -1.45
SMC2-205ENST00000493955 CCNI2Q6ZMN8 369 aaPredicted RBP5.97□□□□□ -1.45
SMC2-205ENST00000493955 OTOAQ7RTW8 1153 aa5.97□□□□□ -1.45
SMC2-205ENST00000493955 GLCCI1Q86VQ1 547 aa5.97□□□□□ -1.45
SMC2-205ENST00000493955 NRACQ8N912 160 aa5.97□□□□□ -1.45
SMC2-205ENST00000493955 CSF3RQ99062 836 aa5.97□□□□□ -1.45
SMC2-205ENST00000493955 PCYT2Q99447 389 aa5.97□□□□□ -1.45
SMC2-205ENST00000493955 MLPHQ9BV36 600 aaPredicted RBP5.97□□□□□ -1.45
SMC2-205ENST00000493955 FNDC11Q9BVV2 318 aa5.97□□□□□ -1.45
SMC2-205ENST00000493955 MRPL9Q9BYD2 267 aaKnown RBP5.97□□□□□ -1.45
SMC2-205ENST00000493955 SEMA6AQ9H2E6 1030 aa5.97□□□□□ -1.45
SMC2-205ENST00000493955 DPAGT1Q9H3H5 408 aa5.97□□□□□ -1.45
SMC2-205ENST00000493955 FRMD4AQ9P2Q2 1039 aaPredicted RBP5.97□□□□□ -1.45
SMC2-205ENST00000493955 LINC01553A4QN01 128 aa5.96□□□□□ -1.46
SMC2-205ENST00000493955 GBAP04062 536 aa5.96□□□□□ -1.46
SMC2-205ENST00000493955 ZFYP08048 801 aaPredicted RBP5.96□□□□□ -1.46
SMC2-205ENST00000493955 OR2T7P0C7T2 308 aa5.96□□□□□ -1.46
SMC2-205ENST00000493955 PLCD1P51178 756 aa5.96□□□□□ -1.46
SMC2-205ENST00000493955 TUBB4BP68371 445 aa5.96□□□□□ -1.46
SMC2-205ENST00000493955 COG7P83436 770 aa5.96□□□□□ -1.46
SMC2-205ENST00000493955 ZNF674Q2M3X9 581 aa5.96□□□□□ -1.46
SMC2-205ENST00000493955 TYSND1Q2T9J0 566 aa5.96□□□□□ -1.46
SMC2-205ENST00000493955 TDRD12Q587J7 1177 aaKnown RBP5.96□□□□□ -1.46
SMC2-205ENST00000493955 NHSL2Q5HYW2 709 aa5.96□□□□□ -1.46
SMC2-205ENST00000493955 GCNT6Q5T4J0 391 aa5.96□□□□□ -1.46
SMC2-205ENST00000493955 C11orf57Q6ZUT1 292 aaPredicted RBP5.96□□□□□ -1.46
SMC2-205ENST00000493955 Q75L30 129 aa5.96□□□□□ -1.46
SMC2-205ENST00000493955 MEPCEQ7L2J0 689 aaKnown RBP5.96□□□□□ -1.46
SMC2-205ENST00000493955 MAP7D3Q8IWC1 876 aa5.96□□□□□ -1.46
SMC2-205ENST00000493955 ZNF34Q8IZ26 560 aa5.96□□□□□ -1.46
SMC2-205ENST00000493955 PRR26Q8N8Z3 221 aa5.96□□□□□ -1.46
SMC2-205ENST00000493955 GOLGA6L2Q8N9W4 650 aaPredicted RBP5.96□□□□□ -1.46
SMC2-205ENST00000493955 GRK7Q8WTQ7 553 aa5.96□□□□□ -1.46
SMC2-205ENST00000493955 SLC38A5Q8WUX1 472 aa5.96□□□□□ -1.46
SMC2-205ENST00000493955 MTBPQ96DY7 904 aa5.96□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms