RNA–Protein interactions for RNA: ENST00000493829.5

USP39-218, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2

Gene USP39, Length 1,660 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-218ENST00000493829 KMOO15229 486 aa19.04■□□□□ 0.64
USP39-218ENST00000493829 MAGEC1O60732 1142 aa19.04■□□□□ 0.64
USP39-218ENST00000493829 CFIP05156 583 aa19.04■□□□□ 0.64
USP39-218ENST00000493829 GPR89BP0CG08 455 aa19.04■□□□□ 0.64
USP39-218ENST00000493829 ZNF37AP17032 561 aaPredicted RBP19.04■□□□□ 0.64
USP39-218ENST00000493829 CRABP2P29373 138 aa19.04■□□□□ 0.64
USP39-218ENST00000493829 NUBP1P53384 320 aa19.04■□□□□ 0.64
USP39-218ENST00000493829 NXPH1P58417 271 aa19.04■□□□□ 0.64
USP39-218ENST00000493829 TEAD4Q15561 434 aa19.04■□□□□ 0.64
USP39-218ENST00000493829 PRAMEF14Q5SWL7 426 aa19.04■□□□□ 0.64
USP39-218ENST00000493829 UGT3A1Q6NUS8 523 aa19.04■□□□□ 0.64
USP39-218ENST00000493829 TIFABQ6ZNK6 161 aa19.04■□□□□ 0.64
USP39-218ENST00000493829 FAM83HQ6ZRV2 1179 aaPredicted RBP19.04■□□□□ 0.64
USP39-218ENST00000493829 EXOC3L1Q86VI1 746 aa19.04■□□□□ 0.64
USP39-218ENST00000493829 IQCHQ86VS3 1027 aa19.04■□□□□ 0.64
USP39-218ENST00000493829 FAM174AQ8TBP5 190 aa19.04■□□□□ 0.64
USP39-218ENST00000493829 KCTD4Q8WVF5 259 aa19.04■□□□□ 0.64
USP39-218ENST00000493829 LINGO1Q96FE5 620 aa19.04■□□□□ 0.64
USP39-218ENST00000493829 RMI1Q9H9A7 625 aa19.04■□□□□ 0.64
USP39-218ENST00000493829 KLC4Q9NSK0 619 aa19.04■□□□□ 0.64
USP39-218ENST00000493829 KLF15Q9UIH9 416 aa19.04■□□□□ 0.64
USP39-218ENST00000493829 DHRS7Q9Y394 339 aa19.04■□□□□ 0.64
USP39-218ENST00000493829 GON4LQ3T8J9 2241 aa19.04■□□□□ 0.64
USP39-218ENST00000493829 SDK1Q7Z5N4 2213 aa19.04■□□□□ 0.64
USP39-218ENST00000493829 H3BQF6 201 aa19.03■□□□□ 0.64
USP39-218ENST00000493829 VILLO15195 856 aa19.03■□□□□ 0.64
USP39-218ENST00000493829 AOAHP28039 575 aa19.03■□□□□ 0.64
USP39-218ENST00000493829 DNAJC3Q13217 504 aa19.03■□□□□ 0.64
USP39-218ENST00000493829 CSHL1Q14406 222 aa19.03■□□□□ 0.64
USP39-218ENST00000493829 SEPT7Q16181 437 aaKnown RBP19.03■□□□□ 0.64
USP39-218ENST00000493829 CCDC6Q16204 474 aa19.03■□□□□ 0.64
USP39-218ENST00000493829 HSP90B2PQ58FF3 399 aa19.03■□□□□ 0.64
USP39-218ENST00000493829 ACSBG2Q5FVE4 666 aa19.03■□□□□ 0.64
USP39-218ENST00000493829 TNFAIP8L3Q5GJ75 292 aa19.03■□□□□ 0.64
USP39-218ENST00000493829 AGBL2Q5U5Z8 902 aa19.03■□□□□ 0.64
USP39-218ENST00000493829 TBC1D1Q86TI0 1168 aaPredicted RBP19.03■□□□□ 0.64
USP39-218ENST00000493829 AMZ2Q86W34 360 aa19.03■□□□□ 0.64
USP39-218ENST00000493829 VRK3Q8IV63 474 aa19.03■□□□□ 0.64
USP39-218ENST00000493829 CFAP206Q8IYR0 622 aa19.03■□□□□ 0.64
USP39-218ENST00000493829 PHACTR4Q8IZ21 702 aa19.03■□□□□ 0.64
USP39-218ENST00000493829 PRSS33Q8NF86 280 aa19.03■□□□□ 0.64
USP39-218ENST00000493829 SKA2Q8WVK7 121 aaPredicted RBP19.03■□□□□ 0.64
USP39-218ENST00000493829 INPP5DQ92835 1189 aa19.03■□□□□ 0.64
USP39-218ENST00000493829 SMC6Q96SB8 1091 aa19.03■□□□□ 0.64
USP39-218ENST00000493829 TMEM168Q9H0V1 697 aa19.03■□□□□ 0.64
USP39-218ENST00000493829 GULP1Q9UBP9 304 aa19.03■□□□□ 0.64
USP39-218ENST00000493829 RUVBL2Q9Y230 463 aaKnown RBP19.03■□□□□ 0.64
USP39-218ENST00000493829 ACOT9Q9Y305 439 aa19.03■□□□□ 0.64
USP39-218ENST00000493829 TNFRSF10CO14798 259 aa19.02■□□□□ 0.64
USP39-218ENST00000493829 MPOP05164 745 aa19.02■□□□□ 0.64
USP39-218ENST00000493829 APOA4P06727 396 aa19.02■□□□□ 0.64
USP39-218ENST00000493829 CCDC166P0CW27 439 aa19.02■□□□□ 0.64
USP39-218ENST00000493829 ARHGAP8P85298 464 aa19.02■□□□□ 0.64
USP39-218ENST00000493829 OVGP1Q12889 678 aa19.02■□□□□ 0.64
USP39-218ENST00000493829 PIWIL4Q7Z3Z4 852 aaKnown RBP19.02■□□□□ 0.64
USP39-218ENST00000493829 SYT12Q8IV01 421 aa19.02■□□□□ 0.64
USP39-218ENST00000493829 OR2L2Q8NH16 312 aa19.02■□□□□ 0.64
USP39-218ENST00000493829 CCL4L1Q8NHW4 92 aa19.02■□□□□ 0.64
USP39-218ENST00000493829 EEF1AKMT1Q8WVE0 214 aa19.02■□□□□ 0.64
USP39-218ENST00000493829 TLCD1Q96CP7 247 aa19.02■□□□□ 0.64
USP39-218ENST00000493829 SCARF2Q96GP6 870 aaPredicted RBP19.02■□□□□ 0.64
USP39-218ENST00000493829 COG4Q9H9E3 785 aa19.02■□□□□ 0.64
USP39-218ENST00000493829 POPDC3Q9HBV1 291 aa19.02■□□□□ 0.64
USP39-218ENST00000493829 ZNF358Q9NW07 568 aa19.02■□□□□ 0.64
USP39-218ENST00000493829 SUSD2Q9UGT4 822 aa19.02■□□□□ 0.64
USP39-218ENST00000493829 ANKRD6Q9Y2G4 727 aa19.02■□□□□ 0.64
USP39-218ENST00000493829 A0A087X1B8 175 aa19.01■□□□□ 0.63
USP39-218ENST00000493829 MGAT4DA6NG13 374 aa19.01■□□□□ 0.63
USP39-218ENST00000493829 PATE3B3GLJ2 98 aa19.01■□□□□ 0.63
USP39-218ENST00000493829 TNFP01375 233 aa19.01■□□□□ 0.63
USP39-218ENST00000493829 AK4P27144 223 aaPredicted RBP19.01■□□□□ 0.63
USP39-218ENST00000493829 HPDP32754 393 aaPredicted RBP19.01■□□□□ 0.63
USP39-218ENST00000493829 CCNFP41002 786 aa19.01■□□□□ 0.63
USP39-218ENST00000493829 SKIV2L2P42285 1042 aaKnown RBP19.01■□□□□ 0.63
USP39-218ENST00000493829 GLRBP48167 497 aa19.01■□□□□ 0.63
USP39-218ENST00000493829 CSRP3P50461 194 aa19.01■□□□□ 0.63
USP39-218ENST00000493829 HK3P52790 923 aa19.01■□□□□ 0.63
USP39-218ENST00000493829 DLG1Q12959 904 aa19.01■□□□□ 0.63
USP39-218ENST00000493829 TTLL9Q3SXZ7 439 aa19.01■□□□□ 0.63
USP39-218ENST00000493829 ZC3H14Q6PJT7 736 aaKnown RBP19.01■□□□□ 0.63
USP39-218ENST00000493829 DCP2Q8IU60 420 aaKnown RBP19.01■□□□□ 0.63
USP39-218ENST00000493829 CENPLQ8N0S6 344 aaPredicted RBP19.01■□□□□ 0.63
USP39-218ENST00000493829 PLD6Q8N2A8 252 aaKnown RBP19.01■□□□□ 0.63
USP39-218ENST00000493829 OXR1Q8N573 874 aa19.01■□□□□ 0.63
USP39-218ENST00000493829 HM13Q8TCT9 377 aa19.01■□□□□ 0.63
USP39-218ENST00000493829 LINC00615Q96LM1 132 aaPredicted RBP19.01■□□□□ 0.63
USP39-218ENST00000493829 C12orf65Q9H3J6 166 aaKnown RBP19.01■□□□□ 0.63
USP39-218ENST00000493829 APOBEC3BQ9UH17 382 aaKnown RBP19.01■□□□□ 0.63
USP39-218ENST00000493829 PSMD13Q9UNM6 376 aa19.01■□□□□ 0.63
USP39-218ENST00000493829 SNX11Q9Y5W9 270 aa19.01■□□□□ 0.63
USP39-218ENST00000493829 ST14Q9Y5Y6 855 aa19.01■□□□□ 0.63
USP39-218ENST00000493829 PRR5-ARHGAP8B1AHC4 643 aa19.01■□□□□ 0.63
USP39-218ENST00000493829 WISP3O95389 354 aaPredicted RBP19.01■□□□□ 0.63
USP39-218ENST00000493829 CELA2BP08218 269 aaPredicted RBP19.01■□□□□ 0.63
USP39-218ENST00000493829 BRAFP15056 766 aa19.01■□□□□ 0.63
USP39-218ENST00000493829 JUNDP17535 347 aa19.01■□□□□ 0.63
USP39-218ENST00000493829 GPS2Q13227 327 aa19.01■□□□□ 0.63
USP39-218ENST00000493829 KIF19Q2TAC6 998 aa19.01■□□□□ 0.63
USP39-218ENST00000493829 SLC30A9Q6PML9 568 aa19.01■□□□□ 0.63
USP39-218ENST00000493829 XKR5Q6UX68 686 aa19.01■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms