RNA–Protein interactions for RNA: ENST00000493711.1

SNX17-208, Transcript of sorting nexin 17, humanhuman

TSL 3

Gene SNX17, Length 583 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-208ENST00000493711 GSDMCQ9BYG8 508 aa12.23□□□□□ -0.45
SNX17-208ENST00000493711 CAPN10Q9HC96 672 aa12.23□□□□□ -0.45
SNX17-208ENST00000493711 DNAJC28Q9NX36 388 aa12.23□□□□□ -0.45
SNX17-208ENST00000493711 SLC17A6Q9P2U8 582 aa12.23□□□□□ -0.45
SNX17-208ENST00000493711 SPASTQ9UBP0 616 aa12.23□□□□□ -0.45
SNX17-208ENST00000493711 TRMT6Q9UJA5 497 aaKnown RBP12.23□□□□□ -0.45
SNX17-208ENST00000493711 GPSM3Q9Y4H4 160 aa12.23□□□□□ -0.45
SNX17-208ENST00000493711 NFS1Q9Y697 457 aa12.23□□□□□ -0.45
SNX17-208ENST00000493711 CACNA1IQ9P0X4 2223 aa12.23□□□□□ -0.45
SNX17-208ENST00000493711 WDR87Q6ZQQ6 2873 aa12.22□□□□□ -0.45
SNX17-208ENST00000493711 ATXN2Q99700 1313 aaKnown RBP12.22□□□□□ -0.45
SNX17-208ENST00000493711 SGTAO43765 313 aa12.22□□□□□ -0.45
SNX17-208ENST00000493711 PIAS1O75925 651 aa12.22□□□□□ -0.45
SNX17-208ENST00000493711 TRIM16O95361 564 aa12.22□□□□□ -0.45
SNX17-208ENST00000493711 CER1O95813 267 aa12.22□□□□□ -0.45
SNX17-208ENST00000493711 LMNAP02545 664 aaKnown RBP12.22□□□□□ -0.45
SNX17-208ENST00000493711 ENO3P13929 434 aaPredicted RBP12.22□□□□□ -0.45
SNX17-208ENST00000493711 CTSEP14091 401 aa12.22□□□□□ -0.45
SNX17-208ENST00000493711 SLC2A4P14672 509 aa12.22□□□□□ -0.45
SNX17-208ENST00000493711 JUNDP17535 347 aa12.22□□□□□ -0.45
SNX17-208ENST00000493711 FDXRP22570 491 aa12.22□□□□□ -0.45
SNX17-208ENST00000493711 RXRGP48443 463 aa12.22□□□□□ -0.45
SNX17-208ENST00000493711 RGS4P49798 205 aa12.22□□□□□ -0.45
SNX17-208ENST00000493711 ARHGAP8P85298 464 aa12.22□□□□□ -0.45
SNX17-208ENST00000493711 ZNF844Q08AG5 666 aa12.22□□□□□ -0.45
SNX17-208ENST00000493711 EIF2B5Q13144 721 aaKnown RBP12.22□□□□□ -0.45
SNX17-208ENST00000493711 LPAL2Q16609 132 aa12.22□□□□□ -0.45
SNX17-208ENST00000493711 INSCQ1MX18 579 aa12.22□□□□□ -0.45
SNX17-208ENST00000493711 ZNF423Q2M1K9 1284 aa12.22□□□□□ -0.45
SNX17-208ENST00000493711 KIF19Q2TAC6 998 aa12.22□□□□□ -0.45
SNX17-208ENST00000493711 KRT71Q3SY84 523 aa12.22□□□□□ -0.45
SNX17-208ENST00000493711 SYTL3Q4VX76 610 aa12.22□□□□□ -0.45
SNX17-208ENST00000493711 TRIM61Q5EBN2 209 aa12.22□□□□□ -0.45
SNX17-208ENST00000493711 TPRG1LQ5T0D9 272 aa12.22□□□□□ -0.45
SNX17-208ENST00000493711 ZNF648Q5T619 568 aaPredicted RBP12.22□□□□□ -0.45
SNX17-208ENST00000493711 ZNF549Q6P9A3 640 aa12.22□□□□□ -0.45
SNX17-208ENST00000493711 CRTC3Q6UUV7 619 aa12.22□□□□□ -0.45
SNX17-208ENST00000493711 TIFABQ6ZNK6 161 aa12.22□□□□□ -0.45
SNX17-208ENST00000493711 OTOAQ7RTW8 1153 aa12.22□□□□□ -0.45
SNX17-208ENST00000493711 RD3Q7Z3Z2 195 aa12.22□□□□□ -0.45
SNX17-208ENST00000493711 SPATS2Q86XZ4 545 aaKnown RBP12.22□□□□□ -0.45
SNX17-208ENST00000493711 SUMF1Q8NBK3 374 aa12.22□□□□□ -0.45
SNX17-208ENST00000493711 ACMSDQ8TDX5 336 aa12.22□□□□□ -0.45
SNX17-208ENST00000493711 INPP5DQ92835 1189 aa12.22□□□□□ -0.45
SNX17-208ENST00000493711 TSACCQ96A04 125 aaPredicted RBP12.22□□□□□ -0.45
SNX17-208ENST00000493711 TMEM159Q96B96 161 aa12.22□□□□□ -0.45
SNX17-208ENST00000493711 CABS1Q96KC9 395 aa12.22□□□□□ -0.45
SNX17-208ENST00000493711 ZIM3Q96PE6 472 aa12.22□□□□□ -0.45
SNX17-208ENST00000493711 ELF4Q99607 663 aaPredicted RBP12.22□□□□□ -0.45
SNX17-208ENST00000493711 ARRDC1-AS1Q9H2J1 176 aa12.22□□□□□ -0.45
SNX17-208ENST00000493711 SYTL2Q9HCH5 934 aa12.22□□□□□ -0.45
SNX17-208ENST00000493711 APOBEC3BQ9UH17 382 aaKnown RBP12.22□□□□□ -0.45
SNX17-208ENST00000493711 LGALS13Q9UHV8 139 aa12.22□□□□□ -0.45
SNX17-208ENST00000493711 TLK1Q9UKI8 766 aa12.22□□□□□ -0.45
SNX17-208ENST00000493711 ACSL5Q9ULC5 683 aa12.22□□□□□ -0.45
SNX17-208ENST00000493711 SLC39A10Q9ULF5 831 aa12.22□□□□□ -0.45
SNX17-208ENST00000493711 MTO1Q9Y2Z2 717 aaKnown RBP12.22□□□□□ -0.45
SNX17-208ENST00000493711 DHRS7Q9Y394 339 aa12.22□□□□□ -0.45
SNX17-208ENST00000493711 SLCO1B1Q9Y6L6 691 aa12.22□□□□□ -0.45
SNX17-208ENST00000493711 PRSS21Q9Y6M0 314 aa12.22□□□□□ -0.45
SNX17-208ENST00000493711 KMT2EQ8IZD2 1858 aa12.22□□□□□ -0.45
SNX17-208ENST00000493711 DNAH14Q0VDD8 3507 aa12.21□□□□□ -0.45
SNX17-208ENST00000493711 A0A087X1B8 175 aa12.21□□□□□ -0.45
SNX17-208ENST00000493711 TLDC2A0PJX2 215 aa12.21□□□□□ -0.45
SNX17-208ENST00000493711 CCDC189A1A4V9 331 aa12.21□□□□□ -0.45
SNX17-208ENST00000493711 NEMP2A6NFY4 417 aa12.21□□□□□ -0.45
SNX17-208ENST00000493711 OPA1O60313 960 aa12.21□□□□□ -0.45
SNX17-208ENST00000493711 FAM155BO75949 473 aa12.21□□□□□ -0.45
SNX17-208ENST00000493711 MPOP05164 745 aa12.21□□□□□ -0.45
SNX17-208ENST00000493711 MYZAPP0CAP1 466 aa12.21□□□□□ -0.45
SNX17-208ENST00000493711 IDSP22304 550 aa12.21□□□□□ -0.45
SNX17-208ENST00000493711 DGKAP23743 735 aa12.21□□□□□ -0.45
SNX17-208ENST00000493711 AOAHP28039 575 aa12.21□□□□□ -0.45
SNX17-208ENST00000493711 GCAP28676 217 aa12.21□□□□□ -0.45
SNX17-208ENST00000493711 TYK2P29597 1187 aa12.21□□□□□ -0.45
SNX17-208ENST00000493711 RAB10P61026 200 aa12.21□□□□□ -0.45
SNX17-208ENST00000493711 TAF1BQ53T94 588 aaPredicted RBP12.21□□□□□ -0.45
SNX17-208ENST00000493711 PLA2G2CQ5R387 149 aa12.21□□□□□ -0.45
SNX17-208ENST00000493711 CEP85LQ5SZL2 805 aa12.21□□□□□ -0.45
SNX17-208ENST00000493711 MROH9Q5TGP6 573 aa12.21□□□□□ -0.45
SNX17-208ENST00000493711 LVRNQ6Q4G3 990 aa12.21□□□□□ -0.45
SNX17-208ENST00000493711 KDM7AQ6ZMT4 941 aa12.21□□□□□ -0.45
SNX17-208ENST00000493711 CHST15Q7LFX5 561 aaPredicted RBP12.21□□□□□ -0.45
SNX17-208ENST00000493711 C11orf96Q7Z7L8 435 aa12.21□□□□□ -0.45
SNX17-208ENST00000493711 LCA5Q86VQ0 697 aa12.21□□□□□ -0.45
SNX17-208ENST00000493711 GKN2Q86XP6 184 aa12.21□□□□□ -0.45
SNX17-208ENST00000493711 ZNF547Q8IVP9 402 aa12.21□□□□□ -0.45
SNX17-208ENST00000493711 DCLK2Q8N568 766 aa12.21□□□□□ -0.45
SNX17-208ENST00000493711 NKAPQ8N5F7 415 aaKnown RBP12.21□□□□□ -0.45
SNX17-208ENST00000493711 ZBTB2Q8N680 514 aa12.21□□□□□ -0.45
SNX17-208ENST00000493711 PNPLA1Q8N8W4 532 aa12.21□□□□□ -0.45
SNX17-208ENST00000493711 OR2W6PQ8NHA6 318 aa12.21□□□□□ -0.45
SNX17-208ENST00000493711 GPBAR1Q8TDU6 330 aa12.21□□□□□ -0.45
SNX17-208ENST00000493711 ELMO1Q92556 727 aa12.21□□□□□ -0.45
SNX17-208ENST00000493711 ISL2Q96A47 359 aa12.21□□□□□ -0.45
SNX17-208ENST00000493711 PGM2Q96G03 612 aa12.21□□□□□ -0.45
SNX17-208ENST00000493711 PDXPQ96GD0 296 aa12.21□□□□□ -0.45
SNX17-208ENST00000493711 ATXN7L3BQ96GX2 97 aa12.21□□□□□ -0.45
SNX17-208ENST00000493711 SENP1Q9P0U3 644 aa12.21□□□□□ -0.45
SNX17-208ENST00000493711 SNX11Q9Y5W9 270 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms