RNA–Protein interactions for RNA: ENST00000493695.1

SMC4-223, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 457 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-223ENST00000493695 SIX2Q9NPC8 291 aa3.72□□□□□ -1.81
SMC4-223ENST00000493695 LIMA1Q9UHB6 759 aaKnown RBP3.72□□□□□ -1.81
SMC4-223ENST00000493695 TP53TG3Q9ULZ0 132 aa3.72□□□□□ -1.81
SMC4-223ENST00000493695 DISP3Q9P2K9 1392 aa3.72□□□□□ -1.81
SMC4-223ENST00000493695 IGLV7-46A0A075B6I9 117 aa3.71□□□□□ -1.82
SMC4-223ENST00000493695 FAM237AA0A1B0GTK4 181 aa3.71□□□□□ -1.82
SMC4-223ENST00000493695 MAGEB17A8MXT2 336 aa3.71□□□□□ -1.82
SMC4-223ENST00000493695 TRMUO75648 421 aaKnown RBP3.71□□□□□ -1.82
SMC4-223ENST00000493695 OR2C1O95371 312 aa3.71□□□□□ -1.82
SMC4-223ENST00000493695 TFAP2AP05549 437 aa3.71□□□□□ -1.82
SMC4-223ENST00000493695 SPARCP09486 303 aa3.71□□□□□ -1.82
SMC4-223ENST00000493695 ACADMP11310 421 aa3.71□□□□□ -1.82
SMC4-223ENST00000493695 NIPAL4Q0D2K0 466 aa3.71□□□□□ -1.82
SMC4-223ENST00000493695 ADAMTSL4-AS1Q5T5F5 129 aa3.71□□□□□ -1.82
SMC4-223ENST00000493695 SPATA1Q5VX52 437 aa3.71□□□□□ -1.82
SMC4-223ENST00000493695 ALS2CLQ60I27 953 aa3.71□□□□□ -1.82
SMC4-223ENST00000493695 PLXDC2Q6UX71 529 aa3.71□□□□□ -1.82
SMC4-223ENST00000493695 CLEC4GQ6UXB4 293 aa3.71□□□□□ -1.82
SMC4-223ENST00000493695 PACS1Q6VY07 963 aa3.71□□□□□ -1.82
SMC4-223ENST00000493695 BRINP3Q76B58 766 aa3.71□□□□□ -1.82
SMC4-223ENST00000493695 NRROSQ86YC3 692 aa3.71□□□□□ -1.82
SMC4-223ENST00000493695 GBGT1Q8N5D6 347 aa3.71□□□□□ -1.82
SMC4-223ENST00000493695 ZNF614Q8N883 585 aa3.71□□□□□ -1.82
SMC4-223ENST00000493695 PPP4R1Q8TF05 950 aa3.71□□□□□ -1.82
SMC4-223ENST00000493695 HARBI1Q96MB7 349 aa3.71□□□□□ -1.82
SMC4-223ENST00000493695 APOBEC3GQ9HC16 384 aaKnown RBP3.71□□□□□ -1.82
SMC4-223ENST00000493695 LTB4R2Q9NPC1 389 aa3.71□□□□□ -1.82
SMC4-223ENST00000493695 PLCXD1Q9NUJ7 323 aa3.71□□□□□ -1.82
SMC4-223ENST00000493695 DLGAP2Q9P1A6 1054 aa3.71□□□□□ -1.82
SMC4-223ENST00000493695 LYVE1Q9Y5Y7 322 aa3.71□□□□□ -1.82
SMC4-223ENST00000493695 A0A0G2JNG1 304 aa3.7□□□□□ -1.82
SMC4-223ENST00000493695 AGAP14A8MT82 685 aa3.7□□□□□ -1.82
SMC4-223ENST00000493695 A8MZ25 164 aa3.7□□□□□ -1.82
SMC4-223ENST00000493695 ANKRD66B4E2M5 251 aa3.7□□□□□ -1.82
SMC4-223ENST00000493695 SCAMP1O15126 338 aa3.7□□□□□ -1.82
SMC4-223ENST00000493695 KCNN4O15554 427 aa3.7□□□□□ -1.82
SMC4-223ENST00000493695 DOK2O60496 412 aa3.7□□□□□ -1.82
SMC4-223ENST00000493695 ZBED4O75132 1171 aa3.7□□□□□ -1.82
SMC4-223ENST00000493695 RNASEH2AO75792 299 aaKnown RBP3.7□□□□□ -1.82
SMC4-223ENST00000493695 CLPTM1O96005 669 aa3.7□□□□□ -1.82
SMC4-223ENST00000493695 UBA7P41226 1012 aa3.7□□□□□ -1.82
SMC4-223ENST00000493695 CEBPZQ03701 1054 aaKnown RBP3.7□□□□□ -1.82
SMC4-223ENST00000493695 PEX6Q13608 980 aa3.7□□□□□ -1.82
SMC4-223ENST00000493695 KIR2DS5Q14953 304 aa3.7□□□□□ -1.82
SMC4-223ENST00000493695 SNAI3Q3KNW1 292 aa3.7□□□□□ -1.82
SMC4-223ENST00000493695 DOK6Q6PKX4 331 aa3.7□□□□□ -1.82
SMC4-223ENST00000493695 SARM1Q6SZW1 724 aa3.7□□□□□ -1.82
SMC4-223ENST00000493695 LMNTD2Q8IXW0 634 aa3.7□□□□□ -1.82
SMC4-223ENST00000493695 FRMD1Q8N878 549 aa3.7□□□□□ -1.82
SMC4-223ENST00000493695 BMPERQ8N8U9 685 aa3.7□□□□□ -1.82
SMC4-223ENST00000493695 SGCDQ92629 289 aa3.7□□□□□ -1.82
SMC4-223ENST00000493695 WDFY2Q96P53 400 aa3.7□□□□□ -1.82
SMC4-223ENST00000493695 SYT15Q9BQS2 421 aa3.7□□□□□ -1.82
SMC4-223ENST00000493695 POLR1BQ9H9Y6 1135 aa3.7□□□□□ -1.82
SMC4-223ENST00000493695 PELI2Q9HAT8 420 aa3.7□□□□□ -1.82
SMC4-223ENST00000493695 KRT84Q9NSB2 600 aa3.7□□□□□ -1.82
SMC4-223ENST00000493695 EHD2Q9NZN4 543 aa3.7□□□□□ -1.82
SMC4-223ENST00000493695 FAM237BA0A1B0GVD1 139 aa3.69□□□□□ -1.82
SMC4-223ENST00000493695 FRMD3A2A2Y4 597 aa3.69□□□□□ -1.82
SMC4-223ENST00000493695 ANKRD18BA2A2Z9 1011 aa3.69□□□□□ -1.82
SMC4-223ENST00000493695 M0QZ24 198 aa3.69□□□□□ -1.82
SMC4-223ENST00000493695 HCRTR2O43614 444 aa3.69□□□□□ -1.82
SMC4-223ENST00000493695 BUD23O43709 281 aaKnown RBP3.69□□□□□ -1.82
SMC4-223ENST00000493695 EML2O95834 649 aa3.69□□□□□ -1.82
SMC4-223ENST00000493695 LIPFP07098 398 aa3.69□□□□□ -1.82
SMC4-223ENST00000493695 TPOP07202 933 aa3.69□□□□□ -1.82
SMC4-223ENST00000493695 ANXA7P20073 488 aaKnown RBP3.69□□□□□ -1.82
SMC4-223ENST00000493695 GATA2P23769 480 aaPredicted RBP3.69□□□□□ -1.82
SMC4-223ENST00000493695 ITGA3P26006 1051 aa3.69□□□□□ -1.82
SMC4-223ENST00000493695 HOXD13P35453 343 aa3.69□□□□□ -1.82
SMC4-223ENST00000493695 ARL3P36405 182 aa3.69□□□□□ -1.82
SMC4-223ENST00000493695 CCR10P46092 362 aa3.69□□□□□ -1.82
SMC4-223ENST00000493695 SP3Q02447 781 aa3.69□□□□□ -1.82
SMC4-223ENST00000493695 RRS1Q15050 365 aaKnown RBP3.69□□□□□ -1.82
SMC4-223ENST00000493695 MEA1Q16626 185 aa3.69□□□□□ -1.82
SMC4-223ENST00000493695 DUOXA1Q1HG43 343 aa3.69□□□□□ -1.82
SMC4-223ENST00000493695 FAM205BPQ63HN1 556 aa3.69□□□□□ -1.82
SMC4-223ENST00000493695 JADE1Q6IE81 842 aa3.69□□□□□ -1.82
SMC4-223ENST00000493695 TSSK4Q6SA08 328 aa3.69□□□□□ -1.82
SMC4-223ENST00000493695 GSTA5Q7RTV2 222 aa3.69□□□□□ -1.82
SMC4-223ENST00000493695 SMARCE1Q969G3 411 aa3.69□□□□□ -1.82
SMC4-223ENST00000493695 TMEM68Q96MH6 324 aa3.69□□□□□ -1.82
SMC4-223ENST00000493695 ACOX2Q99424 681 aa3.69□□□□□ -1.82
SMC4-223ENST00000493695 SEPT5Q99719 369 aaPredicted RBP3.69□□□□□ -1.82
SMC4-223ENST00000493695 KIF9Q9HAQ2 790 aa3.69□□□□□ -1.82
SMC4-223ENST00000493695 SEPT11Q9NVA2 429 aaKnown RBP3.69□□□□□ -1.82
SMC4-223ENST00000493695 KLHL9Q9P2J3 617 aa3.69□□□□□ -1.82
SMC4-223ENST00000493695 CNOT8Q9UFF9 292 aaKnown RBP3.69□□□□□ -1.82
SMC4-223ENST00000493695 MOB4Q9Y3A3 225 aa3.69□□□□□ -1.82
SMC4-223ENST00000493695 TDRD15B5MCY1 1934 aaKnown RBP3.68□□□□□ -1.82
SMC4-223ENST00000493695 EIF3CLB5ME19 914 aaKnown RBP3.68□□□□□ -1.82
SMC4-223ENST00000493695 FAM90A26D6RGX4 464 aa3.68□□□□□ -1.82
SMC4-223ENST00000493695 IPO7O95373 1038 aaKnown RBP3.68□□□□□ -1.82
SMC4-223ENST00000493695 MOCS3O95396 460 aa3.68□□□□□ -1.82
SMC4-223ENST00000493695 TRIM49P0CI25 452 aa3.68□□□□□ -1.82
SMC4-223ENST00000493695 TRIM49CP0CI26 452 aa3.68□□□□□ -1.82
SMC4-223ENST00000493695 IL7RP16871 459 aa3.68□□□□□ -1.82
SMC4-223ENST00000493695 ZNF182P17025 639 aaPredicted RBP3.68□□□□□ -1.82
SMC4-223ENST00000493695 SHC1P29353 583 aa3.68□□□□□ -1.82
SMC4-223ENST00000493695 PSMB10P40306 273 aa3.68□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms