RNA–Protein interactions for RNA: ENST00000493456.5

NUP50-218, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-218ENST00000493456 ITGA1P56199 1179 aa17.24■□□□□ 0.35
NUP50-218ENST00000493456 SLC10A2Q12908 348 aaPredicted RBP17.24■□□□□ 0.35
NUP50-218ENST00000493456 PLEKHS1Q5SXH7 462 aa17.24■□□□□ 0.35
NUP50-218ENST00000493456 ZDHHC20Q5W0Z9 365 aa17.24■□□□□ 0.35
NUP50-218ENST00000493456 ARMC6Q6NXE6 501 aa17.24■□□□□ 0.35
NUP50-218ENST00000493456 PQLC3Q8N755 202 aa17.24■□□□□ 0.35
NUP50-218ENST00000493456 TTC13Q8NBP0 860 aa17.24■□□□□ 0.35
NUP50-218ENST00000493456 DTX3LQ8TDB6 740 aa17.24■□□□□ 0.35
NUP50-218ENST00000493456 ZFPM2Q8WW38 1151 aa17.24■□□□□ 0.35
NUP50-218ENST00000493456 C19orf60Q96EN9 201 aa17.24■□□□□ 0.35
NUP50-218ENST00000493456 SYTL2Q9HCH5 934 aa17.24■□□□□ 0.35
NUP50-218ENST00000493456 SOHLH2Q9NX45 425 aa17.24■□□□□ 0.35
NUP50-218ENST00000493456 FBN2P35556 2912 aa17.24■□□□□ 0.35
NUP50-218ENST00000493456 A6NL46 340 aa17.23■□□□□ 0.35
NUP50-218ENST00000493456 RORAP35398 523 aa17.23■□□□□ 0.35
NUP50-218ENST00000493456 HMGCLP35914 325 aa17.23■□□□□ 0.35
NUP50-218ENST00000493456 ELOAQ14241 798 aaKnown RBP17.23■□□□□ 0.35
NUP50-218ENST00000493456 PCSK7Q16549 785 aa17.23■□□□□ 0.35
NUP50-218ENST00000493456 ATP13A4Q4VNC1 1196 aa17.23■□□□□ 0.35
NUP50-218ENST00000493456 LDLRAP1Q5SW96 308 aa17.23■□□□□ 0.35
NUP50-218ENST00000493456 CCDC70Q6NSX1 233 aa17.23■□□□□ 0.35
NUP50-218ENST00000493456 FAM198BQ6UWH4 519 aa17.23■□□□□ 0.35
NUP50-218ENST00000493456 RAB43Q86YS6 212 aa17.23■□□□□ 0.35
NUP50-218ENST00000493456 SLC34A3Q8N130 599 aa17.23■□□□□ 0.35
NUP50-218ENST00000493456 ZBTB2Q8N680 514 aa17.23■□□□□ 0.35
NUP50-218ENST00000493456 TADA1Q96BN2 335 aa17.23■□□□□ 0.35
NUP50-218ENST00000493456 CLIP3Q96DZ5 547 aa17.23■□□□□ 0.35
NUP50-218ENST00000493456 SGSM3Q96HU1 749 aa17.23■□□□□ 0.35
NUP50-218ENST00000493456 SLC25A51Q9H1U9 297 aa17.23■□□□□ 0.35
NUP50-218ENST00000493456 IGSF5Q9NSI5 407 aa17.23■□□□□ 0.35
NUP50-218ENST00000493456 IMP3Q9NV31 184 aaKnown RBP17.23■□□□□ 0.35
NUP50-218ENST00000493456 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP17.23■□□□□ 0.35
NUP50-218ENST00000493456 PSMD13Q9UNM6 376 aa17.23■□□□□ 0.35
NUP50-218ENST00000493456 B3GNT3Q9Y2A9 372 aa17.23■□□□□ 0.35
NUP50-218ENST00000493456 BZW2Q9Y6E2 419 aaKnown RBP17.23■□□□□ 0.35
NUP50-218ENST00000493456 ANKUB1A6NFN9 424 aa17.22■□□□□ 0.35
NUP50-218ENST00000493456 KRT86O43790 486 aa17.22■□□□□ 0.35
NUP50-218ENST00000493456 KLHL41O60662 606 aa17.22■□□□□ 0.35
NUP50-218ENST00000493456 POP7O75817 140 aaKnown RBP17.22■□□□□ 0.35
NUP50-218ENST00000493456 NDST3O95803 873 aa17.22■□□□□ 0.35
NUP50-218ENST00000493456 XRCC4Q13426 336 aa17.22■□□□□ 0.35
NUP50-218ENST00000493456 ATP1A4Q13733 1029 aa17.22■□□□□ 0.35
NUP50-218ENST00000493456 FILIP1LQ4L180 1135 aa17.22■□□□□ 0.35
NUP50-218ENST00000493456 C1QL3Q5VWW1 255 aa17.22■□□□□ 0.35
NUP50-218ENST00000493456 LCN10Q6JVE6 187 aa17.22■□□□□ 0.35
NUP50-218ENST00000493456 SYTL1Q8IYJ3 562 aa17.22■□□□□ 0.35
NUP50-218ENST00000493456 TTC30BQ8N4P2 665 aa17.22■□□□□ 0.35
NUP50-218ENST00000493456 BEND7Q8N7W2 519 aaPredicted RBP17.22■□□□□ 0.35
NUP50-218ENST00000493456 DPH2Q9BQC3 489 aaPredicted RBP17.22■□□□□ 0.35
NUP50-218ENST00000493456 TRABDQ9H4I3 376 aa17.22■□□□□ 0.35
NUP50-218ENST00000493456 BPIFA1Q9NP55 256 aa17.22■□□□□ 0.35
NUP50-218ENST00000493456 ASF1BQ9NVP2 202 aa17.22■□□□□ 0.35
NUP50-218ENST00000493456 PADI2Q9Y2J8 665 aa17.22■□□□□ 0.35
NUP50-218ENST00000493456 MATN2O00339 956 aa17.21■□□□□ 0.35
NUP50-218ENST00000493456 AURKAO14965 403 aa17.21■□□□□ 0.35
NUP50-218ENST00000493456 ALPPP05187 535 aa17.21■□□□□ 0.35
NUP50-218ENST00000493456 CAPN1P07384 714 aa17.21■□□□□ 0.35
NUP50-218ENST00000493456 MSL3P1P0C860 447 aa17.21■□□□□ 0.35
NUP50-218ENST00000493456 ELAVL4P26378 380 aaKnown RBP17.21■□□□□ 0.35
NUP50-218ENST00000493456 KPNA2P52292 529 aaKnown RBP17.21■□□□□ 0.35
NUP50-218ENST00000493456 CTSCP53634 463 aa17.21■□□□□ 0.35
NUP50-218ENST00000493456 ADCY2Q08462 1091 aa17.21■□□□□ 0.35
NUP50-218ENST00000493456 AP1B1Q10567 949 aa17.21■□□□□ 0.35
NUP50-218ENST00000493456 ABRQ12979 859 aa17.21■□□□□ 0.35
NUP50-218ENST00000493456 NFE2L1Q14494 772 aa17.21■□□□□ 0.35
NUP50-218ENST00000493456 NCF4Q15080 339 aa17.21■□□□□ 0.35
NUP50-218ENST00000493456 PLEKHN1Q494U1 663 aaPredicted RBP17.21■□□□□ 0.35
NUP50-218ENST00000493456 METRNLQ641Q3 311 aa17.21■□□□□ 0.35
NUP50-218ENST00000493456 FAM83HQ6ZRV2 1179 aaPredicted RBP17.21■□□□□ 0.35
NUP50-218ENST00000493456 RASGEF1AQ8N9B8 481 aa17.21■□□□□ 0.35
NUP50-218ENST00000493456 DDHD1Q8NEL9 900 aa17.21■□□□□ 0.35
NUP50-218ENST00000493456 AGAP3Q96P47 875 aa17.21■□□□□ 0.35
NUP50-218ENST00000493456 IP6K3Q96PC2 410 aa17.21■□□□□ 0.35
NUP50-218ENST00000493456 DHRS4Q9BTZ2 278 aa17.21■□□□□ 0.35
NUP50-218ENST00000493456 TLR10Q9BXR5 811 aa17.21■□□□□ 0.35
NUP50-218ENST00000493456 CEP41Q9BYV8 373 aa17.21■□□□□ 0.35
NUP50-218ENST00000493456 KIR3DX1Q9H7L2 352 aa17.21■□□□□ 0.35
NUP50-218ENST00000493456 LMBRD1Q9NUN5 540 aa17.21■□□□□ 0.35
NUP50-218ENST00000493456 PCMTD2Q9NV79 361 aa17.21■□□□□ 0.35
NUP50-218ENST00000493456 SPO11Q9Y5K1 396 aa17.21■□□□□ 0.35
NUP50-218ENST00000493456 CFAP20Q9Y6A4 193 aaKnown RBP17.21■□□□□ 0.35
NUP50-218ENST00000493456 APCP25054 2843 aa17.21■□□□□ 0.35
NUP50-218ENST00000493456 KLHL33A6NCF5 533 aa17.2■□□□□ 0.34
NUP50-218ENST00000493456 OR6C74A6NCV1 312 aa17.2■□□□□ 0.34
NUP50-218ENST00000493456 C9J4A7 227 aa17.2■□□□□ 0.34
NUP50-218ENST00000493456 CYP2A7P20853 494 aa17.2■□□□□ 0.34
NUP50-218ENST00000493456 SPAM1P38567 509 aa17.2■□□□□ 0.34
NUP50-218ENST00000493456 PRKAA1Q13131 559 aa17.2■□□□□ 0.34
NUP50-218ENST00000493456 RAPSNQ13702 412 aa17.2■□□□□ 0.34
NUP50-218ENST00000493456 FIGNQ5HY92 759 aa17.2■□□□□ 0.34
NUP50-218ENST00000493456 PRAMEF17Q5VTA0 474 aa17.2■□□□□ 0.34
NUP50-218ENST00000493456 FAM69BQ5VUD6 431 aa17.2■□□□□ 0.34
NUP50-218ENST00000493456 LYPLAL1Q5VWZ2 237 aa17.2■□□□□ 0.34
NUP50-218ENST00000493456 HGSNATQ68CP4 663 aa17.2■□□□□ 0.34
NUP50-218ENST00000493456 TMEM220Q6QAJ8 160 aa17.2■□□□□ 0.34
NUP50-218ENST00000493456 CISD2Q8N5K1 135 aaKnown RBP17.2■□□□□ 0.34
NUP50-218ENST00000493456 PLD5Q8N7P1 536 aa17.2■□□□□ 0.34
NUP50-218ENST00000493456 C12orf66Q96MD2 445 aa17.2■□□□□ 0.34
NUP50-218ENST00000493456 RNF157Q96PX1 679 aa17.2■□□□□ 0.34
NUP50-218ENST00000493456 ILKAPQ9H0C8 392 aaPredicted RBP17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms