RNA–Protein interactions for RNA: ENST00000493430.5

PTCD3-218, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 782 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-218ENST00000493430 SH2D4BQ5SQS7 431 aa3.16□□□□□ -1.9
PTCD3-218ENST00000493430 FAM72AQ5TYM5 149 aa3.16□□□□□ -1.9
PTCD3-218ENST00000493430 PLA2G4FQ68DD2 849 aa3.16□□□□□ -1.9
PTCD3-218ENST00000493430 TANGO2Q6ICL3 276 aa3.16□□□□□ -1.9
PTCD3-218ENST00000493430 FAM72DQ6L9T8 149 aa3.16□□□□□ -1.9
PTCD3-218ENST00000493430 FAM122CQ6P4D5 195 aa3.16□□□□□ -1.9
PTCD3-218ENST00000493430 FAM160B2Q86V87 743 aa3.16□□□□□ -1.9
PTCD3-218ENST00000493430 FAM72BQ86X60 149 aa3.16□□□□□ -1.9
PTCD3-218ENST00000493430 SRBD1Q8N5C6 995 aaKnown RBP3.16□□□□□ -1.9
PTCD3-218ENST00000493430 WDSUB1Q8N9V3 476 aa3.16□□□□□ -1.9
PTCD3-218ENST00000493430 DNAAF1Q8NEP3 725 aa3.16□□□□□ -1.9
PTCD3-218ENST00000493430 CTCFLQ8NI51 663 aaPredicted RBP3.16□□□□□ -1.9
PTCD3-218ENST00000493430 CREB3L4Q8TEY5 395 aa3.16□□□□□ -1.9
PTCD3-218ENST00000493430 GDPD5Q8WTR4 605 aa3.16□□□□□ -1.9
PTCD3-218ENST00000493430 TMEM170AQ8WVE7 144 aa3.16□□□□□ -1.9
PTCD3-218ENST00000493430 ESR2Q92731 530 aa3.16□□□□□ -1.9
PTCD3-218ENST00000493430 TANKQ92844 425 aa3.16□□□□□ -1.9
PTCD3-218ENST00000493430 CSF3RQ99062 836 aa3.16□□□□□ -1.9
PTCD3-218ENST00000493430 LBHD1Q9BQE6 289 aaPredicted RBP3.16□□□□□ -1.9
PTCD3-218ENST00000493430 UBAC1Q9BSL1 405 aa3.16□□□□□ -1.9
PTCD3-218ENST00000493430 TRMT61BQ9BVS5 477 aaKnown RBP3.16□□□□□ -1.9
PTCD3-218ENST00000493430 UPF3BQ9BZI7 483 aaKnown RBP3.16□□□□□ -1.9
PTCD3-218ENST00000493430 CTDSP1Q9GZU7 261 aa3.16□□□□□ -1.9
PTCD3-218ENST00000493430 SCRT2Q9NQ03 307 aa3.16□□□□□ -1.9
PTCD3-218ENST00000493430 PXMP2Q9NR77 195 aa3.16□□□□□ -1.9
PTCD3-218ENST00000493430 ZFP57Q9NU63 452 aa3.16□□□□□ -1.9
PTCD3-218ENST00000493430 HDAC6Q9UBN7 1215 aa3.16□□□□□ -1.9
PTCD3-218ENST00000493430 SLC9A2Q9UBY0 812 aa3.16□□□□□ -1.9
PTCD3-218ENST00000493430 UNC80Q8N2C7 3258 aa3.16□□□□□ -1.9
PTCD3-218ENST00000493430 RAD50Q92878 1312 aa3.16□□□□□ -1.9
PTCD3-218ENST00000493430 A0A087WWV3 80 aa3.15□□□□□ -1.91
PTCD3-218ENST00000493430 A0A0G2JPF8 293 aa3.15□□□□□ -1.91
PTCD3-218ENST00000493430 A0A0U1RQG5 324 aaPredicted RBP3.15□□□□□ -1.91
PTCD3-218ENST00000493430 KLF18A0A0U1RQI7 1052 aa3.15□□□□□ -1.91
PTCD3-218ENST00000493430 CCDC194A0A1B0GVG4 234 aa3.15□□□□□ -1.91
PTCD3-218ENST00000493430 TYW5A2RUC4 315 aaKnown RBP3.15□□□□□ -1.91
PTCD3-218ENST00000493430 ERI2A8K979 691 aaKnown RBP3.15□□□□□ -1.91
PTCD3-218ENST00000493430 HNRNPCL3B7ZW38 293 aa3.15□□□□□ -1.91
PTCD3-218ENST00000493430 C16orf97H3BN30 126 aa3.15□□□□□ -1.91
PTCD3-218ENST00000493430 WNT9BO14905 357 aa3.15□□□□□ -1.91
PTCD3-218ENST00000493430 TPD52L2O43399 206 aaKnown RBP3.15□□□□□ -1.91
PTCD3-218ENST00000493430 EDIL3O43854 480 aa3.15□□□□□ -1.91
PTCD3-218ENST00000493430 HNRNPCL1O60812 293 aaKnown RBP3.15□□□□□ -1.91
PTCD3-218ENST00000493430 NBNO60934 754 aa3.15□□□□□ -1.91
PTCD3-218ENST00000493430 SLC22A3O75751 556 aa3.15□□□□□ -1.91
PTCD3-218ENST00000493430 APOHP02749 345 aaPredicted RBP3.15□□□□□ -1.91
PTCD3-218ENST00000493430 CA3P07451 260 aa3.15□□□□□ -1.91
PTCD3-218ENST00000493430 SETSIPP0DME0 302 aa3.15□□□□□ -1.91
PTCD3-218ENST00000493430 HNRNPCL4P0DMR1 293 aa3.15□□□□□ -1.91
PTCD3-218ENST00000493430 FOSL2P15408 326 aa3.15□□□□□ -1.91
PTCD3-218ENST00000493430 CST5P28325 142 aaPredicted RBP3.15□□□□□ -1.91
PTCD3-218ENST00000493430 ATP12AP54707 1039 aa3.15□□□□□ -1.91
PTCD3-218ENST00000493430 PPP2R5BQ15173 497 aa3.15□□□□□ -1.91
PTCD3-218ENST00000493430 OASLQ15646 514 aaKnown RBP3.15□□□□□ -1.91
PTCD3-218ENST00000493430 AMZ1Q400G9 498 aa3.15□□□□□ -1.91
PTCD3-218ENST00000493430 DUSP28Q4G0W2 176 aa3.15□□□□□ -1.91
PTCD3-218ENST00000493430 FBXO43Q4G163 708 aa3.15□□□□□ -1.91
PTCD3-218ENST00000493430 ZNF484Q5JVG2 852 aa3.15□□□□□ -1.91
PTCD3-218ENST00000493430 JAKMIP3Q5VZ66 844 aa3.15□□□□□ -1.91
PTCD3-218ENST00000493430 SLC26A9Q7LBE3 791 aa3.15□□□□□ -1.91
PTCD3-218ENST00000493430 OR13A1Q8NGR1 328 aa3.15□□□□□ -1.91
PTCD3-218ENST00000493430 LNX1Q8TBB1 728 aaPredicted RBP3.15□□□□□ -1.91
PTCD3-218ENST00000493430 CSGALNACT1Q8TDX6 532 aa3.15□□□□□ -1.91
PTCD3-218ENST00000493430 CHURC1Q8WUH1 139 aa3.15□□□□□ -1.91
PTCD3-218ENST00000493430 HSPH1Q92598 858 aa3.15□□□□□ -1.91
PTCD3-218ENST00000493430 TAF15Q92804 592 aaKnown RBP eCLIP3.15□□□□□ -1.91
PTCD3-218ENST00000493430 GLT1D1Q96MS3 346 aa3.15□□□□□ -1.91
PTCD3-218ENST00000493430 C1QTNF5Q9BXJ0 243 aa3.15□□□□□ -1.91
PTCD3-218ENST00000493430 ALDH8A1Q9H2A2 487 aaPredicted RBP3.15□□□□□ -1.91
PTCD3-218ENST00000493430 CHMP4BQ9H444 224 aaKnown RBP3.15□□□□□ -1.91
PTCD3-218ENST00000493430 ZNF334Q9HCZ1 680 aaPredicted RBP3.15□□□□□ -1.91
PTCD3-218ENST00000493430 PTPRHQ9HD43 1115 aa3.15□□□□□ -1.91
PTCD3-218ENST00000493430 TLR8Q9NR97 1041 aaKnown RBP3.15□□□□□ -1.91
PTCD3-218ENST00000493430 CYSLTR2Q9NS75 346 aa3.15□□□□□ -1.91
PTCD3-218ENST00000493430 TCP11L1Q9NUJ3 509 aa3.15□□□□□ -1.91
PTCD3-218ENST00000493430 NDRG3Q9UGV2 375 aa3.15□□□□□ -1.91
PTCD3-218ENST00000493430 CD207Q9UJ71 328 aa3.15□□□□□ -1.91
PTCD3-218ENST00000493430 ZNF711Q9Y462 761 aa3.15□□□□□ -1.91
PTCD3-218ENST00000493430 TTC28Q96AY4 2481 aa3.15□□□□□ -1.91
PTCD3-218ENST00000493430 WDR19Q8NEZ3 1342 aa3.15□□□□□ -1.91
PTCD3-218ENST00000493430 ATXN2Q99700 1313 aaKnown RBP3.15□□□□□ -1.91
PTCD3-218ENST00000493430 TMEM131Q92545 1883 aa3.14□□□□□ -1.91
PTCD3-218ENST00000493430 SPAG17Q6Q759 2223 aa3.14□□□□□ -1.91
PTCD3-218ENST00000493430 EBAG9O00559 213 aa3.14□□□□□ -1.91
PTCD3-218ENST00000493430 MEIS2O14770 477 aa3.14□□□□□ -1.91
PTCD3-218ENST00000493430 ZIC3O60481 467 aa3.14□□□□□ -1.91
PTCD3-218ENST00000493430 ATP2C2O75185 946 aa3.14□□□□□ -1.91
PTCD3-218ENST00000493430 RGS11O94810 467 aa3.14□□□□□ -1.91
PTCD3-218ENST00000493430 CCNE2O96020 404 aa3.14□□□□□ -1.91
PTCD3-218ENST00000493430 TIMP1P01033 207 aa3.14□□□□□ -1.91
PTCD3-218ENST00000493430 LGALS2P05162 132 aa3.14□□□□□ -1.91
PTCD3-218ENST00000493430 RNF224P0DH78 156 aa3.14□□□□□ -1.91
PTCD3-218ENST00000493430 SRCP12931 536 aa3.14□□□□□ -1.91
PTCD3-218ENST00000493430 HNF1BP35680 557 aa3.14□□□□□ -1.91
PTCD3-218ENST00000493430 PIGAP37287 484 aa3.14□□□□□ -1.91
PTCD3-218ENST00000493430 HSD17B4P51659 736 aa3.14□□□□□ -1.91
PTCD3-218ENST00000493430 FOXO1Q12778 655 aa3.14□□□□□ -1.91
PTCD3-218ENST00000493430 ITGB3BPQ13352 177 aaPredicted RBP3.14□□□□□ -1.91
PTCD3-218ENST00000493430 NECTIN1Q15223 517 aa3.14□□□□□ -1.91
PTCD3-218ENST00000493430 PTGISQ16647 500 aa3.14□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms