RNA–Protein interactions for RNA: ENST00000492772.1

SND1-215, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 4

Gene SND1, Length 549 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-215ENST00000492772 PCSK7Q16549 785 aa10.74□□□□□ -0.69
SND1-215ENST00000492772 ATP13A4Q4VNC1 1196 aa10.74□□□□□ -0.69
SND1-215ENST00000492772 ZRANB3Q5FWF4 1079 aa10.74□□□□□ -0.69
SND1-215ENST00000492772 LDLRAP1Q5SW96 308 aa10.74□□□□□ -0.69
SND1-215ENST00000492772 VWA5B1Q5TIE3 1220 aa10.74□□□□□ -0.69
SND1-215ENST00000492772 RAB43Q86YS6 212 aa10.74□□□□□ -0.69
SND1-215ENST00000492772 DTX3LQ8TDB6 740 aa10.74□□□□□ -0.69
SND1-215ENST00000492772 ZFPM2Q8WW38 1151 aa10.74□□□□□ -0.69
SND1-215ENST00000492772 CLIP3Q96DZ5 547 aa10.74□□□□□ -0.69
SND1-215ENST00000492772 SGSM3Q96HU1 749 aa10.74□□□□□ -0.69
SND1-215ENST00000492772 NAT10Q9H0A0 1025 aaKnown RBP10.74□□□□□ -0.69
SND1-215ENST00000492772 SLC25A51Q9H1U9 297 aa10.74□□□□□ -0.69
SND1-215ENST00000492772 TRABDQ9H4I3 376 aa10.74□□□□□ -0.69
SND1-215ENST00000492772 SYTL2Q9HCH5 934 aa10.74□□□□□ -0.69
SND1-215ENST00000492772 LMBRD1Q9NUN5 540 aa10.74□□□□□ -0.69
SND1-215ENST00000492772 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP10.74□□□□□ -0.694e-11■■□□□ 13.7
SND1-215ENST00000492772 TMEM63CQ9P1W3 806 aa10.74□□□□□ -0.69
SND1-215ENST00000492772 LCMT1Q9UIC8 334 aa10.74□□□□□ -0.69
SND1-215ENST00000492772 TMPRSS11EQ9UL52 423 aa10.74□□□□□ -0.69
SND1-215ENST00000492772 PSMD13Q9UNM6 376 aa10.74□□□□□ -0.69
SND1-215ENST00000492772 PADI2Q9Y2J8 665 aa10.74□□□□□ -0.69
SND1-215ENST00000492772 DNMT3AQ9Y6K1 912 aaPredicted RBP10.74□□□□□ -0.69
SND1-215ENST00000492772 KLHL33A6NCF5 533 aa10.73□□□□□ -0.69
SND1-215ENST00000492772 A6NL46 340 aa10.73□□□□□ -0.69
SND1-215ENST00000492772 MATN2O00339 956 aa10.73□□□□□ -0.69
SND1-215ENST00000492772 PPP1R12AO14974 1030 aaPredicted RBP10.73□□□□□ -0.69
SND1-215ENST00000492772 KLHL41O60662 606 aa10.73□□□□□ -0.69
SND1-215ENST00000492772 POP7O75817 140 aaKnown RBP10.73□□□□□ -0.69
SND1-215ENST00000492772 PROSCO94903 275 aa10.73□□□□□ -0.69
SND1-215ENST00000492772 CBX6O95503 412 aa10.73□□□□□ -0.69
SND1-215ENST00000492772 TNFRSF8P28908 595 aa10.73□□□□□ -0.69
SND1-215ENST00000492772 RORAP35398 523 aa10.73□□□□□ -0.69
SND1-215ENST00000492772 SPAM1P38567 509 aa10.73□□□□□ -0.69
SND1-215ENST00000492772 ITGA1P56199 1179 aa10.73□□□□□ -0.69
SND1-215ENST00000492772 AP1B1Q10567 949 aa10.73□□□□□ -0.69
SND1-215ENST00000492772 ELOAQ14241 798 aaKnown RBP10.73□□□□□ -0.69
SND1-215ENST00000492772 NFE2L1Q14494 772 aa10.73□□□□□ -0.69
SND1-215ENST00000492772 PDK1Q15118 436 aa10.73□□□□□ -0.69
SND1-215ENST00000492772 FIGNQ5HY92 759 aa10.73□□□□□ -0.69
SND1-215ENST00000492772 PLEKHS1Q5SXH7 462 aa10.73□□□□□ -0.69
SND1-215ENST00000492772 HGSNATQ68CP4 663 aa10.73□□□□□ -0.69
SND1-215ENST00000492772 FAM198BQ6UWH4 519 aa10.73□□□□□ -0.69
SND1-215ENST00000492772 FAM83HQ6ZRV2 1179 aaPredicted RBP10.73□□□□□ -0.69
SND1-215ENST00000492772 SYTL1Q8IYJ3 562 aa10.73□□□□□ -0.69
SND1-215ENST00000492772 TTC30BQ8N4P2 665 aa10.73□□□□□ -0.69
SND1-215ENST00000492772 BEND7Q8N7W2 519 aaPredicted RBP10.73□□□□□ -0.69
SND1-215ENST00000492772 TTC13Q8NBP0 860 aa10.73□□□□□ -0.69
SND1-215ENST00000492772 SLC38A9Q8NBW4 561 aa10.73□□□□□ -0.69
SND1-215ENST00000492772 DDHD1Q8NEL9 900 aa10.73□□□□□ -0.69
SND1-215ENST00000492772 TADA1Q96BN2 335 aa10.73□□□□□ -0.69
SND1-215ENST00000492772 SNRNP40Q96DI7 357 aaKnown RBP10.73□□□□□ -0.69
SND1-215ENST00000492772 IP6K3Q96PC2 410 aa10.73□□□□□ -0.69
SND1-215ENST00000492772 DPH2Q9BQC3 489 aaPredicted RBP10.73□□□□□ -0.69
SND1-215ENST00000492772 CEP41Q9BYV8 373 aa10.73□□□□□ -0.69
SND1-215ENST00000492772 BPIFA1Q9NP55 256 aa10.73□□□□□ -0.69
SND1-215ENST00000492772 SLC24A2Q9UI40 661 aa10.73□□□□□ -0.69
SND1-215ENST00000492772 B3GNT3Q9Y2A9 372 aa10.73□□□□□ -0.69
SND1-215ENST00000492772 SPO11Q9Y5K1 396 aa10.73□□□□□ -0.69
SND1-215ENST00000492772 ANKRD17O75179 2603 aaKnown RBP10.72□□□□□ -0.69
SND1-215ENST00000492772 OR6C74A6NCV1 312 aa10.72□□□□□ -0.69
SND1-215ENST00000492772 ANKUB1A6NFN9 424 aa10.72□□□□□ -0.69
SND1-215ENST00000492772 ZNF487B1APH4 448 aa10.72□□□□□ -0.69
SND1-215ENST00000492772 C9J4A7 227 aa10.72□□□□□ -0.69
SND1-215ENST00000492772 AURKAO14965 403 aa10.72□□□□□ -0.69
SND1-215ENST00000492772 KRT86O43790 486 aa10.72□□□□□ -0.69
SND1-215ENST00000492772 IGHEP01854 428 aa10.72□□□□□ -0.69
SND1-215ENST00000492772 ALPPP05187 535 aa10.72□□□□□ -0.69
SND1-215ENST00000492772 MSL3P1P0C860 447 aa10.72□□□□□ -0.69
SND1-215ENST00000492772 PYGMP11217 842 aa10.72□□□□□ -0.69
SND1-215ENST00000492772 HLA-DPA1P20036 260 aa10.72□□□□□ -0.69
SND1-215ENST00000492772 CYP2A7P20853 494 aa10.72□□□□□ -0.69
SND1-215ENST00000492772 KPNA2P52292 529 aaKnown RBP10.72□□□□□ -0.69
SND1-215ENST00000492772 CTSCP53634 463 aa10.72□□□□□ -0.69
SND1-215ENST00000492772 ADCY2Q08462 1091 aa10.72□□□□□ -0.69
SND1-215ENST00000492772 ABRQ12979 859 aa10.72□□□□□ -0.69
SND1-215ENST00000492772 PRKAA1Q13131 559 aa10.72□□□□□ -0.69
SND1-215ENST00000492772 ATP1A4Q13733 1029 aa10.72□□□□□ -0.69
SND1-215ENST00000492772 ITGA9Q13797 1035 aa10.72□□□□□ -0.69
SND1-215ENST00000492772 NCF4Q15080 339 aa10.72□□□□□ -0.69
SND1-215ENST00000492772 PPP2R5EQ16537 467 aa10.72□□□□□ -0.69
SND1-215ENST00000492772 LONRF2Q1L5Z9 754 aa10.72□□□□□ -0.69
SND1-215ENST00000492772 ZFYVE27Q5T4F4 411 aa10.72□□□□□ -0.69
SND1-215ENST00000492772 LYPLAL1Q5VWZ2 237 aa10.72□□□□□ -0.69
SND1-215ENST00000492772 METRNLQ641Q3 311 aa10.72□□□□□ -0.69
SND1-215ENST00000492772 SLC34A3Q8N130 599 aa10.72□□□□□ -0.69
SND1-215ENST00000492772 ZBTB2Q8N680 514 aa10.72□□□□□ -0.69
SND1-215ENST00000492772 PLD5Q8N7P1 536 aa10.72□□□□□ -0.69
SND1-215ENST00000492772 RASGEF1AQ8N9B8 481 aa10.72□□□□□ -0.69
SND1-215ENST00000492772 TRAF3IP1Q8TDR0 691 aaPredicted RBP10.72□□□□□ -0.69
SND1-215ENST00000492772 TM9SF4Q92544 642 aa10.72□□□□□ -0.69
SND1-215ENST00000492772 SYN2Q92777 582 aaPredicted RBP10.72□□□□□ -0.69
SND1-215ENST00000492772 C19orf60Q96EN9 201 aa10.72□□□□□ -0.69
SND1-215ENST00000492772 C12orf66Q96MD2 445 aa10.72□□□□□ -0.69
SND1-215ENST00000492772 AGAP3Q96P47 875 aa10.72□□□□□ -0.69
SND1-215ENST00000492772 RNF157Q96PX1 679 aa10.72□□□□□ -0.69
SND1-215ENST00000492772 DHRS4Q9BTZ2 278 aa10.72□□□□□ -0.69
SND1-215ENST00000492772 TLR10Q9BXR5 811 aa10.72□□□□□ -0.69
SND1-215ENST00000492772 ILKAPQ9H0C8 392 aaPredicted RBP10.72□□□□□ -0.69
SND1-215ENST00000492772 KIR3DX1Q9H7L2 352 aa10.72□□□□□ -0.69
SND1-215ENST00000492772 ACTR5Q9H9F9 607 aaPredicted RBP10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms