RNA–Protein interactions for RNA: ENST00000491106.1

SNRNP40-207, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 459 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-207ENST00000491106 I3L4J1 428 aa2.06□□□□□ -2.08
SNRNP40-207ENST00000491106 DDX39AO00148 427 aaKnown RBP2.06□□□□□ -2.08
SNRNP40-207ENST00000491106 CLIC1O00299 241 aa2.06□□□□□ -2.08
SNRNP40-207ENST00000491106 ACKR2O00590 384 aa2.06□□□□□ -2.08
SNRNP40-207ENST00000491106 CAPN9O14815 690 aa2.06□□□□□ -2.08
SNRNP40-207ENST00000491106 HNRNPDLO14979 420 aaKnown RBP2.06□□□□□ -2.08
SNRNP40-207ENST00000491106 MCF2LO15068 1137 aa2.06□□□□□ -2.08
SNRNP40-207ENST00000491106 SLC22A2O15244 555 aa2.06□□□□□ -2.08
SNRNP40-207ENST00000491106 OGTO15294 1046 aa2.06□□□□□ -2.08
SNRNP40-207ENST00000491106 INSIG1O15503 277 aa2.06□□□□□ -2.08
SNRNP40-207ENST00000491106 CHMP2AO43633 222 aa2.06□□□□□ -2.08
SNRNP40-207ENST00000491106 TOM1L1O75674 476 aa2.06□□□□□ -2.08
SNRNP40-207ENST00000491106 RFPL1O75677 317 aa2.06□□□□□ -2.08
SNRNP40-207ENST00000491106 PIAS2O75928 621 aa2.06□□□□□ -2.08
SNRNP40-207ENST00000491106 IL18RAPO95256 599 aa2.06□□□□□ -2.08
SNRNP40-207ENST00000491106 BAG2O95816 211 aa2.06□□□□□ -2.08
SNRNP40-207ENST00000491106 ASS1P00966 412 aaKnown RBP2.06□□□□□ -2.08
SNRNP40-207ENST00000491106 PENKP01210 267 aaPredicted RBP2.06□□□□□ -2.08
SNRNP40-207ENST00000491106 IFNB1P01574 187 aa2.06□□□□□ -2.08
SNRNP40-207ENST00000491106 TNNC2P02585 160 aa2.06□□□□□ -2.08
SNRNP40-207ENST00000491106 APOEP02649 317 aa2.06□□□□□ -2.08
SNRNP40-207ENST00000491106 ADRB2P07550 413 aa2.06□□□□□ -2.08
SNRNP40-207ENST00000491106 BPGMP07738 259 aa2.06□□□□□ -2.08
SNRNP40-207ENST00000491106 LYNP07948 512 aa2.06□□□□□ -2.08
SNRNP40-207ENST00000491106 PABPC4LP0CB38 370 aaKnown RBP2.06□□□□□ -2.08
SNRNP40-207ENST00000491106 ZSCAN5DPP0CG00 497 aa2.06□□□□□ -2.08
SNRNP40-207ENST00000491106 DLATP10515 647 aaKnown RBP2.06□□□□□ -2.08
SNRNP40-207ENST00000491106 MYL2P10916 166 aa2.06□□□□□ -2.08
SNRNP40-207ENST00000491106 P4HA1P13674 534 aa2.06□□□□□ -2.08
SNRNP40-207ENST00000491106 ETS1P14921 441 aa2.06□□□□□ -2.08
SNRNP40-207ENST00000491106 UQCRBP14927 111 aa2.06□□□□□ -2.08
SNRNP40-207ENST00000491106 ANPEPP15144 967 aa2.06□□□□□ -2.08
SNRNP40-207ENST00000491106 DESP17661 470 aa2.06□□□□□ -2.08
SNRNP40-207ENST00000491106 AOC1P19801 751 aa2.06□□□□□ -2.08
SNRNP40-207ENST00000491106 TGM2P21980 687 aa2.06□□□□□ -2.08
SNRNP40-207ENST00000491106 ATP5F1P24539 256 aaPredicted RBP2.06□□□□□ -2.08
SNRNP40-207ENST00000491106 PRKCHP24723 683 aa2.06□□□□□ -2.08
SNRNP40-207ENST00000491106 PSMA2P25787 234 aa2.06□□□□□ -2.08
SNRNP40-207ENST00000491106 SERPINB3P29508 390 aa2.06□□□□□ -2.08
SNRNP40-207ENST00000491106 PRDX6P30041 224 aa2.06□□□□□ -2.08
SNRNP40-207ENST00000491106 CCND2P30279 289 aa2.06□□□□□ -2.08
SNRNP40-207ENST00000491106 ELK3P41970 407 aa2.06□□□□□ -2.08
SNRNP40-207ENST00000491106 MAGEA6P43360 314 aa2.06□□□□□ -2.08
SNRNP40-207ENST00000491106 NAMPTP43490 491 aa2.06□□□□□ -2.08
SNRNP40-207ENST00000491106 RPL5P46777 297 aaKnown RBP2.06□□□□□ -2.08
SNRNP40-207ENST00000491106 NPY2RP49146 381 aa2.06□□□□□ -2.08
SNRNP40-207ENST00000491106 CTCFP49711 727 aaPredicted RBP2.06□□□□□ -2.08
SNRNP40-207ENST00000491106 ACOT2P49753 483 aa2.06□□□□□ -2.08
SNRNP40-207ENST00000491106 RAB27AP51159 221 aa2.06□□□□□ -2.08
SNRNP40-207ENST00000491106 CCNHP51946 323 aaPredicted RBP2.06□□□□□ -2.08
SNRNP40-207ENST00000491106 PGDP52209 483 aa2.06□□□□□ -2.08
SNRNP40-207ENST00000491106 HDAC4P56524 1084 aa2.06□□□□□ -2.08
SNRNP40-207ENST00000491106 EIF3EP60228 445 aaKnown RBP2.06□□□□□ -2.08
SNRNP40-207ENST00000491106 KRTAP10-11P60412 298 aa2.06□□□□□ -2.08
SNRNP40-207ENST00000491106 MYL6P60660 151 aa2.06□□□□□ -2.08
SNRNP40-207ENST00000491106 ACTR3P61158 418 aa2.06□□□□□ -2.08
SNRNP40-207ENST00000491106 RPS6P62753 249 aaKnown RBP2.06□□□□□ -2.08
SNRNP40-207ENST00000491106 RAB1AP62820 205 aa2.06□□□□□ -2.08
SNRNP40-207ENST00000491106 OTUD4Q01804 1114 aaKnown RBP2.06□□□□□ -2.08
SNRNP40-207ENST00000491106 ID2Q02363 134 aa2.06□□□□□ -2.08
SNRNP40-207ENST00000491106 SF3A3Q12874 501 aaKnown RBP eCLIP2.06□□□□□ -2.08
SNRNP40-207ENST00000491106 CUL3Q13618 768 aa2.06□□□□□ -2.08
SNRNP40-207ENST00000491106 THOC5Q13769 683 aaKnown RBP2.06□□□□□ -2.08
SNRNP40-207ENST00000491106 BAATQ14032 418 aaPredicted RBP2.06□□□□□ -2.08
SNRNP40-207ENST00000491106 TFDP1Q14186 410 aa2.06□□□□□ -2.08
SNRNP40-207ENST00000491106 DAZAP2Q15038 168 aaPredicted RBP2.06□□□□□ -2.08
SNRNP40-207ENST00000491106 PGM5Q15124 567 aa2.06□□□□□ -2.08
SNRNP40-207ENST00000491106 TMED2Q15363 201 aa2.06□□□□□ -2.08
SNRNP40-207ENST00000491106 PDCD2Q16342 344 aaPredicted RBP2.06□□□□□ -2.08
SNRNP40-207ENST00000491106 FAM110CQ1W6H9 321 aa2.06□□□□□ -2.08
SNRNP40-207ENST00000491106 SLC5A9Q2M3M2 681 aa2.06□□□□□ -2.08
SNRNP40-207ENST00000491106 CCDC153Q494R4 210 aa2.06□□□□□ -2.08
SNRNP40-207ENST00000491106 AWAT1Q58HT5 328 aa2.06□□□□□ -2.08
SNRNP40-207ENST00000491106 ACSBG2Q5FVE4 666 aa2.06□□□□□ -2.08
SNRNP40-207ENST00000491106 FSCBQ5H9T9 825 aa2.06□□□□□ -2.08
SNRNP40-207ENST00000491106 EFHC1Q5JVL4 640 aa2.06□□□□□ -2.08
SNRNP40-207ENST00000491106 MANEAQ5SRI9 462 aa2.06□□□□□ -2.08
SNRNP40-207ENST00000491106 GRTP1Q5TC63 336 aa2.06□□□□□ -2.08
SNRNP40-207ENST00000491106 RNF220Q5VTB9 566 aa2.06□□□□□ -2.08
SNRNP40-207ENST00000491106 RUSC1-AS1Q66K80 236 aa2.06□□□□□ -2.08
SNRNP40-207ENST00000491106 CGB2Q6NT52 195 aa2.06□□□□□ -2.08
SNRNP40-207ENST00000491106 SLC39A4Q6P5W5 647 aa2.06□□□□□ -2.08
SNRNP40-207ENST00000491106 ZNF449Q6P9G9 518 aa2.06□□□□□ -2.08
SNRNP40-207ENST00000491106 DSTYKQ6XUX3 929 aa2.06□□□□□ -2.08
SNRNP40-207ENST00000491106 LRRC74BQ6ZQY2 392 aa2.06□□□□□ -2.08
SNRNP40-207ENST00000491106 DCDC5Q6ZRR9 648 aa2.06□□□□□ -2.08
SNRNP40-207ENST00000491106 COLCA1Q6ZS62 124 aa2.06□□□□□ -2.08
SNRNP40-207ENST00000491106 CCDC149Q6ZUS6 474 aa2.06□□□□□ -2.08
SNRNP40-207ENST00000491106 FAM47EQ6ZV65 393 aa2.06□□□□□ -2.08
SNRNP40-207ENST00000491106 PTCHD4Q6ZW05 846 aa2.06□□□□□ -2.08
SNRNP40-207ENST00000491106 TMEM110Q86TL2 294 aa2.06□□□□□ -2.08
SNRNP40-207ENST00000491106 KBTBD6Q86V97 674 aa2.06□□□□□ -2.08
SNRNP40-207ENST00000491106 LCA5Q86VQ0 697 aa2.06□□□□□ -2.08
SNRNP40-207ENST00000491106 RHPN2Q8IUC4 686 aa2.06□□□□□ -2.08
SNRNP40-207ENST00000491106 ZDHHC17Q8IUH5 632 aa2.06□□□□□ -2.08
SNRNP40-207ENST00000491106 WDR49Q8IV35 697 aa2.06□□□□□ -2.08
SNRNP40-207ENST00000491106 PSTKQ8IV42 348 aaKnown RBP2.06□□□□□ -2.08
SNRNP40-207ENST00000491106 CROCCP3Q8IVE0 287 aa2.06□□□□□ -2.08
SNRNP40-207ENST00000491106 SFTPA1Q8IWL2 248 aa2.06□□□□□ -2.08
SNRNP40-207ENST00000491106 UNC45BQ8IWX7 931 aa2.06□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms