RNA–Protein interactions for RNA: ENST00000490516.5

EXOSC3-207, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 773 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-207ENST00000490516 RFX8Q6ZV50 586 aa13.31□□□□□ -0.28
EXOSC3-207ENST00000490516 B4GALNT4Q76KP1 1039 aa13.31□□□□□ -0.28
EXOSC3-207ENST00000490516 TAOK1Q7L7X3 1001 aa13.31□□□□□ -0.28
EXOSC3-207ENST00000490516 OR1N1Q8NGS0 311 aa13.31□□□□□ -0.28
EXOSC3-207ENST00000490516 EPS8L1Q8TE68 723 aa13.31□□□□□ -0.28
EXOSC3-207ENST00000490516 NRGNQ92686 78 aa13.31□□□□□ -0.28
EXOSC3-207ENST00000490516 DPH2Q9BQC3 489 aaPredicted RBP13.31□□□□□ -0.28
EXOSC3-207ENST00000490516 SELENOOQ9BVL4 669 aa13.31□□□□□ -0.28
EXOSC3-207ENST00000490516 SLC6A20Q9NP91 592 aa13.31□□□□□ -0.28
EXOSC3-207ENST00000490516 FHOD1Q9Y613 1164 aa13.31□□□□□ -0.28
EXOSC3-207ENST00000490516 FLNAP21333 2647 aaKnown RBP13.31□□□□□ -0.28
EXOSC3-207ENST00000490516 SLC9B1P1A6NJY1 282 aa13.3□□□□□ -0.28
EXOSC3-207ENST00000490516 AGPSO00116 658 aa13.3□□□□□ -0.28
EXOSC3-207ENST00000490516 ZNF749O43361 778 aa13.3□□□□□ -0.28
EXOSC3-207ENST00000490516 MTX2O75431 263 aa13.3□□□□□ -0.28
EXOSC3-207ENST00000490516 UMODP07911 640 aa13.3□□□□□ -0.28
EXOSC3-207ENST00000490516 CBSLP0DN79 551 aa13.3□□□□□ -0.28
EXOSC3-207ENST00000490516 AGAP20933 346 aa13.3□□□□□ -0.28
EXOSC3-207ENST00000490516 CBSP35520 551 aa13.3□□□□□ -0.28
EXOSC3-207ENST00000490516 IST1P53990 364 aa13.3□□□□□ -0.28
EXOSC3-207ENST00000490516 PPP2R2AP63151 447 aa13.3□□□□□ -0.28
EXOSC3-207ENST00000490516 LTBQ06643 244 aa13.3□□□□□ -0.28
EXOSC3-207ENST00000490516 ADCY2Q08462 1091 aa13.3□□□□□ -0.28
EXOSC3-207ENST00000490516 IHHQ14623 411 aa13.3□□□□□ -0.28
EXOSC3-207ENST00000490516 SLC9A5Q14940 896 aa13.3□□□□□ -0.28
EXOSC3-207ENST00000490516 PRAMEF13Q5VWM6 474 aa13.3□□□□□ -0.28
EXOSC3-207ENST00000490516 MEX3BQ6ZN04 569 aaKnown RBP13.3□□□□□ -0.28
EXOSC3-207ENST00000490516 OR2Y1Q8NGV0 311 aa13.3□□□□□ -0.28
EXOSC3-207ENST00000490516 KCTD15Q96SI1 283 aaPredicted RBP13.3□□□□□ -0.28
EXOSC3-207ENST00000490516 TRIM56Q9BRZ2 755 aaKnown RBP13.3□□□□□ -0.28
EXOSC3-207ENST00000490516 TMEM121Q9BTD3 319 aa13.3□□□□□ -0.28
EXOSC3-207ENST00000490516 ENKD1Q9H0I2 346 aa13.3□□□□□ -0.28
EXOSC3-207ENST00000490516 DHX35Q9H5Z1 703 aaKnown RBP13.3□□□□□ -0.28
EXOSC3-207ENST00000490516 EPS8L2Q9H6S3 715 aa13.3□□□□□ -0.28
EXOSC3-207ENST00000490516 GPN3Q9UHW5 284 aaPredicted RBP13.3□□□□□ -0.28
EXOSC3-207ENST00000490516 FBXL4Q9UKA2 621 aa13.3□□□□□ -0.28
EXOSC3-207ENST00000490516 AP4E1Q9UPM8 1137 aa13.3□□□□□ -0.28
EXOSC3-207ENST00000490516 CHKBQ9Y259 395 aa13.3□□□□□ -0.28
EXOSC3-207ENST00000490516 ABCA4P78363 2273 aa13.3□□□□□ -0.28
EXOSC3-207ENST00000490516 C1orf232A0A0U1RR37 186 aa13.29□□□□□ -0.28
EXOSC3-207ENST00000490516 OR6C74A6NCV1 312 aa13.29□□□□□ -0.28
EXOSC3-207ENST00000490516 FANCGO15287 622 aa13.29□□□□□ -0.28
EXOSC3-207ENST00000490516 MST1P26927 711 aa13.29□□□□□ -0.28
EXOSC3-207ENST00000490516 DNAJA1P31689 397 aaKnown RBP13.29□□□□□ -0.28
EXOSC3-207ENST00000490516 HALP42357 657 aa13.29□□□□□ -0.28
EXOSC3-207ENST00000490516 ZNF143P52747 638 aaPredicted RBP13.29□□□□□ -0.28
EXOSC3-207ENST00000490516 SMSP52788 366 aa13.29□□□□□ -0.28
EXOSC3-207ENST00000490516 FOXD4Q12950 439 aaPredicted RBP13.29□□□□□ -0.28
EXOSC3-207ENST00000490516 RPE65Q16518 533 aa13.29□□□□□ -0.28
EXOSC3-207ENST00000490516 RALGPS1Q5JS13 557 aa13.29□□□□□ -0.28
EXOSC3-207ENST00000490516 ZNF569Q5MCW4 686 aa13.29□□□□□ -0.28
EXOSC3-207ENST00000490516 C1orf189Q5VU69 101 aa13.29□□□□□ -0.28
EXOSC3-207ENST00000490516 FAAH2Q6GMR7 532 aa13.29□□□□□ -0.28
EXOSC3-207ENST00000490516 LINC00696Q6ZRV3 163 aa13.29□□□□□ -0.28
EXOSC3-207ENST00000490516 Q71RC1 249 aaPredicted RBP13.29□□□□□ -0.28
EXOSC3-207ENST00000490516 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.29□□□□□ -0.28
EXOSC3-207ENST00000490516 ACBD4Q8NC06 268 aa13.29□□□□□ -0.28
EXOSC3-207ENST00000490516 SPATA16Q9BXB7 569 aa13.29□□□□□ -0.28
EXOSC3-207ENST00000490516 VPS16Q9H269 839 aa13.29□□□□□ -0.28
EXOSC3-207ENST00000490516 CXXC4Q9H2H0 198 aa13.29□□□□□ -0.28
EXOSC3-207ENST00000490516 DLL4Q9NR61 685 aa13.29□□□□□ -0.28
EXOSC3-207ENST00000490516 PKD2L2Q9NZM6 624 aa13.29□□□□□ -0.28
EXOSC3-207ENST00000490516 NOCTQ9UK39 431 aaKnown RBP13.29□□□□□ -0.28
EXOSC3-207ENST00000490516 PSMD13Q9UNM6 376 aa13.29□□□□□ -0.28
EXOSC3-207ENST00000490516 CDYLQ9Y232 598 aa13.29□□□□□ -0.28
EXOSC3-207ENST00000490516 RPH3AQ9Y2J0 694 aaPredicted RBP13.29□□□□□ -0.28
EXOSC3-207ENST00000490516 CCDC66A2RUB6 948 aa13.28□□□□□ -0.28
EXOSC3-207ENST00000490516 SIGLEC16A6NMB1 481 aa13.28□□□□□ -0.28
EXOSC3-207ENST00000490516 KIAA1324LA8MWY0 1029 aaPredicted RBP13.28□□□□□ -0.28
EXOSC3-207ENST00000490516 GPR89AB7ZAQ6 455 aa13.28□□□□□ -0.28
EXOSC3-207ENST00000490516 GPR89BP0CG08 455 aa13.28□□□□□ -0.28
EXOSC3-207ENST00000490516 ESRRAP11474 423 aaPredicted RBP13.28□□□□□ -0.28
EXOSC3-207ENST00000490516 CHRNB2P17787 502 aa13.28□□□□□ -0.28
EXOSC3-207ENST00000490516 MMP13P45452 471 aa13.28□□□□□ -0.28
EXOSC3-207ENST00000490516 PREPP48147 710 aa13.28□□□□□ -0.28
EXOSC3-207ENST00000490516 RPL7AP62424 266 aaKnown RBP13.28□□□□□ -0.28
EXOSC3-207ENST00000490516 FMO1Q01740 532 aa13.28□□□□□ -0.28
EXOSC3-207ENST00000490516 KHDC1Q4VXA5 237 aaKnown RBP13.28□□□□□ -0.28
EXOSC3-207ENST00000490516 ALS2CLQ60I27 953 aa13.28□□□□□ -0.28
EXOSC3-207ENST00000490516 ARMC6Q6NXE6 501 aa13.28□□□□□ -0.28
EXOSC3-207ENST00000490516 NCCRP1Q6ZVX7 275 aaPredicted RBP13.28□□□□□ -0.28
EXOSC3-207ENST00000490516 C11orf96Q7Z7L8 435 aa13.28□□□□□ -0.28
EXOSC3-207ENST00000490516 OOSP2Q86WS3 158 aa13.28□□□□□ -0.28
EXOSC3-207ENST00000490516 RAVER1Q8IY67 606 aaKnown RBP13.28□□□□□ -0.28
EXOSC3-207ENST00000490516 BBS5Q8N3I7 341 aa13.28□□□□□ -0.28
EXOSC3-207ENST00000490516 CHDHQ8NE62 594 aaPredicted RBP13.28□□□□□ -0.28
EXOSC3-207ENST00000490516 ADAMTS18Q8TE60 1221 aa13.28□□□□□ -0.28
EXOSC3-207ENST00000490516 PTERQ96BW5 349 aa13.28□□□□□ -0.28
EXOSC3-207ENST00000490516 MCEEQ96PE7 176 aa13.28□□□□□ -0.28
EXOSC3-207ENST00000490516 NDC1Q9BTX1 674 aa13.28□□□□□ -0.28
EXOSC3-207ENST00000490516 GDPD2Q9HCC8 539 aa13.28□□□□□ -0.28
EXOSC3-207ENST00000490516 NT5MQ9NPB1 228 aa13.28□□□□□ -0.28
EXOSC3-207ENST00000490516 SEC14L3Q9UDX4 400 aa13.28□□□□□ -0.28
EXOSC3-207ENST00000490516 SERTAD3Q9UJW9 196 aa13.28□□□□□ -0.28
EXOSC3-207ENST00000490516 DNPEPQ9ULA0 475 aa13.28□□□□□ -0.28
EXOSC3-207ENST00000490516 CFAP20Q9Y6A4 193 aaKnown RBP13.28□□□□□ -0.28
EXOSC3-207ENST00000490516 NSD1Q96L73 2696 aaPredicted RBP13.27□□□□□ -0.28
EXOSC3-207ENST00000490516 JMJD1CQ15652 2540 aa13.27□□□□□ -0.29
EXOSC3-207ENST00000490516 E7EQ34 232 aa13.27□□□□□ -0.29
EXOSC3-207ENST00000490516 MAFKO60675 156 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms