RNA–Protein interactions for RNA: ENST00000490475.1

TTC28-207, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 5

Gene TTC28, Length 724 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-207ENST00000490475 KCNAB2Q13303 367 aa10.18□□□□□ -0.78
TTC28-207ENST00000490475 MPP3Q13368 585 aa10.18□□□□□ -0.78
TTC28-207ENST00000490475 SPARCL1Q14515 664 aa10.18□□□□□ -0.78
TTC28-207ENST00000490475 OASLQ15646 514 aaKnown RBP10.18□□□□□ -0.78
TTC28-207ENST00000490475 KCTD19Q17RG1 926 aaPredicted RBP10.18□□□□□ -0.78
TTC28-207ENST00000490475 LONRF2Q1L5Z9 754 aa10.18□□□□□ -0.78
TTC28-207ENST00000490475 LDLRAP1Q5SW96 308 aa10.18□□□□□ -0.78
TTC28-207ENST00000490475 ALS2CLQ60I27 953 aa10.18□□□□□ -0.78
TTC28-207ENST00000490475 PRUNE1Q86TP1 453 aa10.18□□□□□ -0.78
TTC28-207ENST00000490475 ZNF761Q86XN6 746 aaPredicted RBP10.18□□□□□ -0.78
TTC28-207ENST00000490475 GDAP1Q8TB36 358 aa10.18□□□□□ -0.78
TTC28-207ENST00000490475 APOBEC4Q8WW27 367 aaKnown RBP10.18□□□□□ -0.78
TTC28-207ENST00000490475 JPH3Q8WXH2 748 aaPredicted RBP10.18□□□□□ -0.78
TTC28-207ENST00000490475 LRRC45Q96CN5 670 aa10.18□□□□□ -0.78
TTC28-207ENST00000490475 MS4A14Q96JA4 679 aa10.18□□□□□ -0.78
TTC28-207ENST00000490475 FCRL4Q96PJ5 515 aa10.18□□□□□ -0.78
TTC28-207ENST00000490475 PPP1R2P1Q96PQ5 205 aa10.18□□□□□ -0.78
TTC28-207ENST00000490475 APOL2Q9BQE5 337 aa10.18□□□□□ -0.78
TTC28-207ENST00000490475 ULBP3Q9BZM4 244 aa10.18□□□□□ -0.78
TTC28-207ENST00000490475 ZNF768Q9H5H4 540 aaKnown RBP10.18□□□□□ -0.78
TTC28-207ENST00000490475 PRDM8Q9NQV8 689 aa10.18□□□□□ -0.78
TTC28-207ENST00000490475 ZNF148Q9UQR1 794 aa10.18□□□□□ -0.78
TTC28-207ENST00000490475 PKP3Q9Y446 797 aa10.18□□□□□ -0.78
TTC28-207ENST00000490475 KCTD3Q9Y597 815 aa10.18□□□□□ -0.78
TTC28-207ENST00000490475 KIF5CO60282 957 aa10.17□□□□□ -0.78
TTC28-207ENST00000490475 RASSF9O75901 435 aa10.17□□□□□ -0.78
TTC28-207ENST00000490475 ANXA9O76027 345 aa10.17□□□□□ -0.78
TTC28-207ENST00000490475 DLGAP3O95886 979 aa10.17□□□□□ -0.78
TTC28-207ENST00000490475 IFNB1P01574 187 aa10.17□□□□□ -0.78
TTC28-207ENST00000490475 SLC4A1P02730 911 aa10.17□□□□□ -0.78
TTC28-207ENST00000490475 CCNYL3P0C7X3 344 aa10.17□□□□□ -0.78
TTC28-207ENST00000490475 ETS1P14921 441 aa10.17□□□□□ -0.78
TTC28-207ENST00000490475 BPIP17213 487 aa10.17□□□□□ -0.78
TTC28-207ENST00000490475 TCN2P20062 427 aa10.17□□□□□ -0.78
TTC28-207ENST00000490475 STIP1P31948 543 aaKnown RBP10.17□□□□□ -0.78
TTC28-207ENST00000490475 ADRA1AP35348 466 aa10.17□□□□□ -0.78
TTC28-207ENST00000490475 SPAM1P38567 509 aa10.17□□□□□ -0.78
TTC28-207ENST00000490475 SLC19A1P41440 591 aa10.17□□□□□ -0.78
TTC28-207ENST00000490475 STAT5AP42229 794 aa10.17□□□□□ -0.78
TTC28-207ENST00000490475 CAPZBP47756 277 aa10.17□□□□□ -0.78
TTC28-207ENST00000490475 KCNJ1P48048 391 aa10.17□□□□□ -0.78
TTC28-207ENST00000490475 GEMP55040 296 aa10.17□□□□□ -0.78
TTC28-207ENST00000490475 PDE1BQ01064 536 aa10.17□□□□□ -0.78
TTC28-207ENST00000490475 FOXM1Q08050 763 aa10.17□□□□□ -0.78
TTC28-207ENST00000490475 DMPKQ09013 629 aa10.17□□□□□ -0.78
TTC28-207ENST00000490475 CDC20Q12834 499 aa10.17□□□□□ -0.78
TTC28-207ENST00000490475 TMEM115Q12893 351 aaPredicted RBP10.17□□□□□ -0.78
TTC28-207ENST00000490475 PRPSAP1Q14558 356 aa10.17□□□□□ -0.78
TTC28-207ENST00000490475 SLC1A5Q15758 541 aa10.17□□□□□ -0.78
TTC28-207ENST00000490475 CCNG2Q16589 344 aa10.17□□□□□ -0.78
TTC28-207ENST00000490475 PARP6Q2NL67 630 aa10.17□□□□□ -0.78
TTC28-207ENST00000490475 CRTC3Q6UUV7 619 aa10.17□□□□□ -0.78
TTC28-207ENST00000490475 RANBP10Q6VN20 620 aa10.17□□□□□ -0.78
TTC28-207ENST00000490475 ARHGEF18Q6ZSZ5 1173 aa10.17□□□□□ -0.78
TTC28-207ENST00000490475 PRSS42Q7Z5A4 293 aa10.17□□□□□ -0.78
TTC28-207ENST00000490475 AMZ2Q86W34 360 aa10.17□□□□□ -0.78
TTC28-207ENST00000490475 KMT5CQ86Y97 462 aa10.17□□□□□ -0.78
TTC28-207ENST00000490475 TRAPPC5Q8IUR0 188 aa10.17□□□□□ -0.78
TTC28-207ENST00000490475 CARFQ8N187 725 aa10.17□□□□□ -0.78
TTC28-207ENST00000490475 C17orf53Q8N3J3 647 aaPredicted RBP10.17□□□□□ -0.78
TTC28-207ENST00000490475 GLIS1Q8NBF1 620 aa10.17□□□□□ -0.78
TTC28-207ENST00000490475 COG1Q8WTW3 980 aa10.17□□□□□ -0.78
TTC28-207ENST00000490475 ZFPM2Q8WW38 1151 aa10.17□□□□□ -0.78
TTC28-207ENST00000490475 UBXN4Q92575 508 aa10.17□□□□□ -0.78
TTC28-207ENST00000490475 PBKQ96KB5 322 aa10.17□□□□□ -0.78
TTC28-207ENST00000490475 CD180Q99467 661 aa10.17□□□□□ -0.78
TTC28-207ENST00000490475 C19orf43Q9BQ61 176 aa10.17□□□□□ -0.78
TTC28-207ENST00000490475 FICDQ9BVA6 458 aa10.17□□□□□ -0.78
TTC28-207ENST00000490475 FSD1LQ9BXM9 530 aa10.17□□□□□ -0.78
TTC28-207ENST00000490475 FRMD8P1Q9BZ68 369 aaPredicted RBP10.17□□□□□ -0.78
TTC28-207ENST00000490475 PDE7BQ9NP56 450 aa10.17□□□□□ -0.78
TTC28-207ENST00000490475 SLC40A1Q9NP59 571 aa10.17□□□□□ -0.78
TTC28-207ENST00000490475 SMARCAL1Q9NZC9 954 aa10.17□□□□□ -0.78
TTC28-207ENST00000490475 KLHL3Q9UH77 587 aa10.17□□□□□ -0.78
TTC28-207ENST00000490475 AAR2Q9Y312 384 aaKnown RBP10.17□□□□□ -0.78
TTC28-207ENST00000490475 PRR19A6NJB7 356 aa10.16□□□□□ -0.78
TTC28-207ENST00000490475 BUD23O43709 281 aaKnown RBP10.16□□□□□ -0.78
TTC28-207ENST00000490475 ZIC2O95409 532 aaPredicted RBP10.16□□□□□ -0.78
TTC28-207ENST00000490475 ZSCAN5DPP0CG00 497 aa10.16□□□□□ -0.78
TTC28-207ENST00000490475 WT1P19544 449 aaPredicted RBP10.16□□□□□ -0.78
TTC28-207ENST00000490475 GNG11P61952 73 aa10.16□□□□□ -0.78
TTC28-207ENST00000490475 CYP4F2P78329 520 aa10.16□□□□□ -0.78
TTC28-207ENST00000490475 LARP7Q4G0J3 582 aaKnown RBP eCLIP10.16□□□□□ -0.78
TTC28-207ENST00000490475 DENND5AQ6IQ26 1287 aa10.16□□□□□ -0.78
TTC28-207ENST00000490475 C6orf15Q6UXA7 325 aaPredicted RBP10.16□□□□□ -0.78
TTC28-207ENST00000490475 GLT6D1Q7Z4J2 308 aa10.16□□□□□ -0.78
TTC28-207ENST00000490475 PPP1R3BQ86XI6 285 aa10.16□□□□□ -0.78
TTC28-207ENST00000490475 RASGRP3Q8IV61 690 aa10.16□□□□□ -0.78
TTC28-207ENST00000490475 RASGEF1CQ8N431 466 aa10.16□□□□□ -0.78
TTC28-207ENST00000490475 PRELID2Q8N945 189 aa10.16□□□□□ -0.78
TTC28-207ENST00000490475 C9orf43Q8TAL5 461 aaPredicted RBP10.16□□□□□ -0.78
TTC28-207ENST00000490475 BLOC1S5Q8TDH9 187 aa10.16□□□□□ -0.78
TTC28-207ENST00000490475 STARD8Q92502 1023 aa10.16□□□□□ -0.78
TTC28-207ENST00000490475 PMEPA1Q969W9 287 aa10.16□□□□□ -0.78
TTC28-207ENST00000490475 STAMBPL1Q96FJ0 436 aa10.16□□□□□ -0.78
TTC28-207ENST00000490475 TGM7Q96PF1 710 aa10.16□□□□□ -0.78
TTC28-207ENST00000490475 OSBPL9Q96SU4 736 aa10.16□□□□□ -0.78
TTC28-207ENST00000490475 TBC1D10AQ9BXI6 508 aa10.16□□□□□ -0.78
TTC28-207ENST00000490475 AP1M1Q9BXS5 423 aa10.16□□□□□ -0.78
TTC28-207ENST00000490475 BPIFA1Q9NP55 256 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms