RNA–Protein interactions for RNA: ENST00000489414.5

EXOSC3-206, Transcript of exosome component 3, humanhuman

TSL 4

Gene EXOSC3, Length 535 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-206ENST00000489414 GPD1LQ8N335 351 aa7.27□□□□□ -1.25
EXOSC3-206ENST00000489414 TXLNBQ8N3L3 684 aa7.27□□□□□ -1.25
EXOSC3-206ENST00000489414 OR2Y1Q8NGV0 311 aa7.27□□□□□ -1.25
EXOSC3-206ENST00000489414 OR6K2Q8NGY2 324 aa7.27□□□□□ -1.25
EXOSC3-206ENST00000489414 OR8K5Q8NH50 307 aa7.27□□□□□ -1.25
EXOSC3-206ENST00000489414 ZNF501Q96CX3 271 aaPredicted RBP7.27□□□□□ -1.25
EXOSC3-206ENST00000489414 ZBED6CLQ96FA7 236 aaPredicted RBP7.27□□□□□ -1.25
EXOSC3-206ENST00000489414 C1orf159Q96HA4 380 aa7.27□□□□□ -1.25
EXOSC3-206ENST00000489414 THOC3Q96J01 351 aaKnown RBP7.27□□□□□ -1.25
EXOSC3-206ENST00000489414 KLHL32Q96NJ5 620 aa7.27□□□□□ -1.25
EXOSC3-206ENST00000489414 ERGIC2Q96RQ1 377 aa7.27□□□□□ -1.25
EXOSC3-206ENST00000489414 PRMT1Q99873 361 aaKnown RBP7.27□□□□□ -1.25
EXOSC3-206ENST00000489414 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.27□□□□□ -1.25
EXOSC3-206ENST00000489414 MUC3BQ9H195 1237 aa7.27□□□□□ -1.25
EXOSC3-206ENST00000489414 ESRP2Q9H6T0 727 aaKnown RBP7.27□□□□□ -1.25
EXOSC3-206ENST00000489414 MRPL44Q9H9J2 332 aaKnown RBP7.27□□□□□ -1.25
EXOSC3-206ENST00000489414 SCHIP1Q9P0W5 487 aaPredicted RBP7.27□□□□□ -1.25
EXOSC3-206ENST00000489414 MKL2Q9ULH7 1088 aa7.27□□□□□ -1.25
EXOSC3-206ENST00000489414 CAPN11Q9UMQ6 739 aa7.27□□□□□ -1.25
EXOSC3-206ENST00000489414 NPIPA1Q9UND3 350 aa7.27□□□□□ -1.25
EXOSC3-206ENST00000489414 TLR6Q9Y2C9 796 aa7.27□□□□□ -1.25
EXOSC3-206ENST00000489414 TBC1D30Q9Y2I9 924 aa7.27□□□□□ -1.25
EXOSC3-206ENST00000489414 CES2O00748 559 aa7.26□□□□□ -1.25
EXOSC3-206ENST00000489414 EIF3DO15371 548 aaKnown RBP eCLIP7.26□□□□□ -1.25
EXOSC3-206ENST00000489414 ASNA1O43681 348 aa7.26□□□□□ -1.25
EXOSC3-206ENST00000489414 UMODP07911 640 aa7.26□□□□□ -1.25
EXOSC3-206ENST00000489414 EPXP11678 715 aa7.26□□□□□ -1.25
EXOSC3-206ENST00000489414 TACR1P25103 407 aa7.26□□□□□ -1.25
EXOSC3-206ENST00000489414 CASQ1P31415 396 aa7.26□□□□□ -1.25
EXOSC3-206ENST00000489414 SOX11P35716 441 aa7.26□□□□□ -1.25
EXOSC3-206ENST00000489414 CAPZBP47756 277 aa7.26□□□□□ -1.25
EXOSC3-206ENST00000489414 SERPINH1P50454 418 aaKnown RBP7.26□□□□□ -1.25
EXOSC3-206ENST00000489414 DNA2P51530 1060 aa7.26□□□□□ -1.25
EXOSC3-206ENST00000489414 IRAK1P51617 712 aa7.26□□□□□ -1.25
EXOSC3-206ENST00000489414 NR1H2P55055 460 aa7.26□□□□□ -1.25
EXOSC3-206ENST00000489414 GNG11P61952 73 aa7.26□□□□□ -1.25
EXOSC3-206ENST00000489414 ZBED6P86452 979 aa7.26□□□□□ -1.25
EXOSC3-206ENST00000489414 TAP2Q03519 686 aa7.26□□□□□ -1.25
EXOSC3-206ENST00000489414 ABRQ12979 859 aa7.26□□□□□ -1.25
EXOSC3-206ENST00000489414 TRPC3Q13507 836 aa7.26□□□□□ -1.25
EXOSC3-206ENST00000489414 DOC2BQ14184 412 aa7.26□□□□□ -1.25
EXOSC3-206ENST00000489414 ACOX1Q15067 660 aa7.26□□□□□ -1.25
EXOSC3-206ENST00000489414 FIGNQ5HY92 759 aa7.26□□□□□ -1.25
EXOSC3-206ENST00000489414 ZNF667Q5HYK9 610 aa7.26□□□□□ -1.25
EXOSC3-206ENST00000489414 ZNF385CQ66K41 422 aaPredicted RBP7.26□□□□□ -1.25
EXOSC3-206ENST00000489414 IYDQ6PHW0 289 aa7.26□□□□□ -1.25
EXOSC3-206ENST00000489414 CD163Q86VB7 1156 aa7.26□□□□□ -1.25
EXOSC3-206ENST00000489414 NELFCDQ8IXH7 590 aa7.26□□□□□ -1.25
EXOSC3-206ENST00000489414 SHISA5Q8N114 240 aa7.26□□□□□ -1.25
EXOSC3-206ENST00000489414 MEIOBQ8N635 442 aa7.26□□□□□ -1.25
EXOSC3-206ENST00000489414 DCAF4L2Q8NA75 395 aa7.26□□□□□ -1.25
EXOSC3-206ENST00000489414 NEK11Q8NG66 645 aa7.26□□□□□ -1.25
EXOSC3-206ENST00000489414 FAM57AQ8TBR7 257 aa7.26□□□□□ -1.25
EXOSC3-206ENST00000489414 ZNF507Q8TCN5 953 aa7.26□□□□□ -1.25
EXOSC3-206ENST00000489414 ELMO3Q96BJ8 720 aa7.26□□□□□ -1.25
EXOSC3-206ENST00000489414 CLIP3Q96DZ5 547 aa7.26□□□□□ -1.25
EXOSC3-206ENST00000489414 CCL19Q99731 98 aa7.26□□□□□ -1.25
EXOSC3-206ENST00000489414 DPH2Q9BQC3 489 aaPredicted RBP7.26□□□□□ -1.25
EXOSC3-206ENST00000489414 STRA6Q9BX79 667 aa7.26□□□□□ -1.25
EXOSC3-206ENST00000489414 OSBPL1AQ9BXW6 950 aa7.26□□□□□ -1.25
EXOSC3-206ENST00000489414 REG4Q9BYZ8 158 aa7.26□□□□□ -1.25
EXOSC3-206ENST00000489414 SHARPINQ9H0F6 387 aa7.26□□□□□ -1.25
EXOSC3-206ENST00000489414 NDST4Q9H3R1 872 aa7.26□□□□□ -1.25
EXOSC3-206ENST00000489414 UCK1Q9HA47 277 aa7.26□□□□□ -1.25
EXOSC3-206ENST00000489414 TBC1D7Q9P0N9 293 aa7.26□□□□□ -1.25
EXOSC3-206ENST00000489414 DNAI1Q9UI46 699 aa7.26□□□□□ -1.25
EXOSC3-206ENST00000489414 NOCTQ9UK39 431 aaKnown RBP7.26□□□□□ -1.25
EXOSC3-206ENST00000489414 UTP18Q9Y5J1 556 aaKnown RBP eCLIP7.26□□□□□ -1.25
EXOSC3-206ENST00000489414 NPFFR2Q9Y5X5 522 aa7.26□□□□□ -1.25
EXOSC3-206ENST00000489414 COL7A1Q02388 2944 aa7.26□□□□□ -1.25
EXOSC3-206ENST00000489414 SOWAHDA6NJG2 315 aa7.25□□□□□ -1.25
EXOSC3-206ENST00000489414 J3QL48 77 aa7.25□□□□□ -1.25
EXOSC3-206ENST00000489414 PDXKO00764 312 aa7.25□□□□□ -1.25
EXOSC3-206ENST00000489414 MTA2O94776 668 aa7.25□□□□□ -1.25
EXOSC3-206ENST00000489414 SLU7O95391 586 aaKnown RBP7.25□□□□□ -1.25
EXOSC3-206ENST00000489414 GCNT3O95395 438 aa7.25□□□□□ -1.25
EXOSC3-206ENST00000489414 PRAMEF1O95521 474 aa7.25□□□□□ -1.25
EXOSC3-206ENST00000489414 F10P00742 488 aa7.25□□□□□ -1.25
EXOSC3-206ENST00000489414 IVLP07476 585 aa7.25□□□□□ -1.25
EXOSC3-206ENST00000489414 EPB41P11171 864 aaKnown RBP7.25□□□□□ -1.25
EXOSC3-206ENST00000489414 ITGA2P17301 1181 aa7.25□□□□□ -1.25
EXOSC3-206ENST00000489414 LIG3P49916 1009 aa7.25□□□□□ -1.25
EXOSC3-206ENST00000489414 NUP107P57740 925 aa7.25□□□□□ -1.25
EXOSC3-206ENST00000489414 FOXL2P58012 376 aa7.25□□□□□ -1.25
EXOSC3-206ENST00000489414 ALDH6A1Q02252 535 aaKnown RBP7.25□□□□□ -1.25
EXOSC3-206ENST00000489414 ELP6Q0PNE2 266 aa7.25□□□□□ -1.25
EXOSC3-206ENST00000489414 PMPCAQ10713 525 aa7.25□□□□□ -1.25
EXOSC3-206ENST00000489414 ALCAMQ13740 583 aa7.25□□□□□ -1.25
EXOSC3-206ENST00000489414 SPA17Q15506 151 aa7.25□□□□□ -1.25
EXOSC3-206ENST00000489414 GPR19Q15760 415 aa7.25□□□□□ -1.25
EXOSC3-206ENST00000489414 KNOP1Q1ED39 458 aaKnown RBP7.25□□□□□ -1.25
EXOSC3-206ENST00000489414 ZNF699Q32M78 642 aa7.25□□□□□ -1.25
EXOSC3-206ENST00000489414 RABGAP1LQ5R372 815 aa7.25□□□□□ -1.25
EXOSC3-206ENST00000489414 ZFYVE27Q5T4F4 411 aa7.25□□□□□ -1.25
EXOSC3-206ENST00000489414 ZNF720Q7Z2F6 126 aa7.25□□□□□ -1.25
EXOSC3-206ENST00000489414 CBWD2Q8IUF1 395 aa7.25□□□□□ -1.25
EXOSC3-206ENST00000489414 MCATQ8IVS2 390 aaKnown RBP7.25□□□□□ -1.25
EXOSC3-206ENST00000489414 TMEM151BQ8IW70 566 aa7.25□□□□□ -1.25
EXOSC3-206ENST00000489414 REXO1L1PQ8IX06 675 aa7.25□□□□□ -1.25
EXOSC3-206ENST00000489414 CCDC170Q8IYT3 715 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms