RNA–Protein interactions for RNA: ENST00000489108.1

USP48-210, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2

Gene USP48, Length 443 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-210ENST00000489108 PCMTD2Q9NV79 361 aa15.78■□□□□ 0.12
USP48-210ENST00000489108 FANCLQ9NW38 375 aa15.78■□□□□ 0.12
USP48-210ENST00000489108 SOHLH2Q9NX45 425 aa15.78■□□□□ 0.12
USP48-210ENST00000489108 PCDHGA10Q9Y5H3 936 aa15.78■□□□□ 0.12
USP48-210ENST00000489108 SETD2Q9BYW2 2564 aaPredicted RBP15.77■□□□□ 0.12
USP48-210ENST00000489108 PRSS44E7EML9 344 aa15.77■□□□□ 0.12
USP48-210ENST00000489108 ZG16O60844 167 aa15.77■□□□□ 0.12
USP48-210ENST00000489108 BPIP17213 487 aa15.77■□□□□ 0.12
USP48-210ENST00000489108 ARCN1P48444 511 aaKnown RBP15.77■□□□□ 0.12
USP48-210ENST00000489108 KPNA2P52292 529 aaKnown RBP15.77■□□□□ 0.12
USP48-210ENST00000489108 PER3P56645 1201 aa15.77■□□□□ 0.12
USP48-210ENST00000489108 BECN1Q14457 450 aa15.77■□□□□ 0.12
USP48-210ENST00000489108 KRT81Q14533 505 aa15.77■□□□□ 0.12
USP48-210ENST00000489108 MYBPC3Q14896 1274 aa15.77■□□□□ 0.12
USP48-210ENST00000489108 NCF4Q15080 339 aa15.77■□□□□ 0.12
USP48-210ENST00000489108 PAFAH1B3Q15102 231 aaKnown RBP15.77■□□□□ 0.12
USP48-210ENST00000489108 NCBP2-AS2Q69YL0 99 aa15.77■□□□□ 0.12
USP48-210ENST00000489108 SPOCD1Q6ZMY3 1216 aa15.77■□□□□ 0.12
USP48-210ENST00000489108 FAM83HQ6ZRV2 1179 aaPredicted RBP15.77■□□□□ 0.12
USP48-210ENST00000489108 Q6ZS92 163 aa15.77■□□□□ 0.12
USP48-210ENST00000489108 ZC3H18Q86VM9 953 aaKnown RBP15.77■□□□□ 0.12
USP48-210ENST00000489108 RAB43Q86YS6 212 aa15.77■□□□□ 0.12
USP48-210ENST00000489108 ZADH2Q8N4Q0 377 aa15.77■□□□□ 0.12
USP48-210ENST00000489108 FATE1Q969F0 183 aa15.77■□□□□ 0.12
USP48-210ENST00000489108 GPR63Q9BZJ6 419 aa15.77■□□□□ 0.12
USP48-210ENST00000489108 AGPAT4Q9NRZ5 378 aa15.77■□□□□ 0.12
USP48-210ENST00000489108 HAUS2Q9NVX0 235 aa15.77■□□□□ 0.12
USP48-210ENST00000489108 NFKBIL1Q9UBC1 381 aaPredicted RBP15.77■□□□□ 0.12
USP48-210ENST00000489108 BTRCQ9Y297 605 aa15.77■□□□□ 0.12
USP48-210ENST00000489108 CFAP20Q9Y6A4 193 aaKnown RBP15.77■□□□□ 0.12
USP48-210ENST00000489108 SCINQ9Y6U3 715 aa15.77■□□□□ 0.12
USP48-210ENST00000489108 CSMD2Q7Z408 3487 aa15.77■□□□□ 0.12
USP48-210ENST00000489108 CELSR1Q9NYQ6 3014 aa15.77■□□□□ 0.11
USP48-210ENST00000489108 OR6C74A6NCV1 312 aa15.76■□□□□ 0.11
USP48-210ENST00000489108 LGALS16A8MUM7 142 aa15.76■□□□□ 0.11
USP48-210ENST00000489108 MASP2O00187 686 aa15.76■□□□□ 0.11
USP48-210ENST00000489108 KCNJ13O60928 360 aa15.76■□□□□ 0.11
USP48-210ENST00000489108 POP7O75817 140 aaKnown RBP15.76■□□□□ 0.11
USP48-210ENST00000489108 ALPPP05187 535 aa15.76■□□□□ 0.11
USP48-210ENST00000489108 GZMAP12544 262 aa15.76■□□□□ 0.11
USP48-210ENST00000489108 ANO6Q4KMQ2 910 aa15.76■□□□□ 0.11
USP48-210ENST00000489108 ARMC6Q6NXE6 501 aa15.76■□□□□ 0.11
USP48-210ENST00000489108 AMZ2Q86W34 360 aa15.76■□□□□ 0.11
USP48-210ENST00000489108 OOSP2Q86WS3 158 aa15.76■□□□□ 0.11
USP48-210ENST00000489108 GALNT16Q8N428 558 aa15.76■□□□□ 0.11
USP48-210ENST00000489108 OR1L3Q8NH93 324 aa15.76■□□□□ 0.11
USP48-210ENST00000489108 GDAP1Q8TB36 358 aa15.76■□□□□ 0.11
USP48-210ENST00000489108 ERGIC2Q96RQ1 377 aa15.76■□□□□ 0.11
USP48-210ENST00000489108 RUBCNLQ9H714 662 aa15.76■□□□□ 0.11
USP48-210ENST00000489108 ACTR5Q9H9F9 607 aaPredicted RBP15.76■□□□□ 0.11
USP48-210ENST00000489108 MAGEE1Q9HCI5 957 aa15.76■□□□□ 0.11
USP48-210ENST00000489108 MRPL47Q9HD33 250 aaKnown RBP15.76■□□□□ 0.11
USP48-210ENST00000489108 IMP3Q9NV31 184 aaKnown RBP15.76■□□□□ 0.11
USP48-210ENST00000489108 ZNF711Q9Y462 761 aa15.76■□□□□ 0.11
USP48-210ENST00000489108 SVILO95425 2214 aa15.75■□□□□ 0.11
USP48-210ENST00000489108 SLC9B1P1A6NJY1 282 aa15.75■□□□□ 0.11
USP48-210ENST00000489108 TMEM150CB9EJG8 249 aa15.75■□□□□ 0.11
USP48-210ENST00000489108 LDB2O43679 373 aa15.75■□□□□ 0.11
USP48-210ENST00000489108 SLC25A11Q02978 314 aaKnown RBP15.75■□□□□ 0.11
USP48-210ENST00000489108 DMPKQ09013 629 aa15.75■□□□□ 0.11
USP48-210ENST00000489108 GTF2H3Q13889 308 aa15.75■□□□□ 0.11
USP48-210ENST00000489108 NFE2L1Q14494 772 aa15.75■□□□□ 0.11
USP48-210ENST00000489108 ZXDCQ2QGD7 858 aaPredicted RBP15.75■□□□□ 0.11
USP48-210ENST00000489108 ATP13A5Q4VNC0 1218 aa15.75■□□□□ 0.11
USP48-210ENST00000489108 ZNF789Q5FWF6 425 aa15.75■□□□□ 0.11
USP48-210ENST00000489108 DCAF10Q5QP82 559 aa15.75■□□□□ 0.11
USP48-210ENST00000489108 MRGPREQ86SM8 312 aa15.75■□□□□ 0.11
USP48-210ENST00000489108 CLEC1AQ8NC01 280 aa15.75■□□□□ 0.11
USP48-210ENST00000489108 FER1L6-AS2Q96M78 137 aa15.75■□□□□ 0.11
USP48-210ENST00000489108 TTC25Q96NG3 672 aa15.75■□□□□ 0.11
USP48-210ENST00000489108 VPS35Q96QK1 796 aa15.75■□□□□ 0.11
USP48-210ENST00000489108 TRIB3Q96RU7 358 aa15.75■□□□□ 0.11
USP48-210ENST00000489108 INSM2Q96T92 566 aaPredicted RBP15.75■□□□□ 0.11
USP48-210ENST00000489108 FANCEQ9HB96 536 aa15.75■□□□□ 0.11
USP48-210ENST00000489108 BPIFA1Q9NP55 256 aa15.75■□□□□ 0.11
USP48-210ENST00000489108 LIMA1Q9UHB6 759 aaKnown RBP15.75■□□□□ 0.11
USP48-210ENST00000489108 DDX3XO00571 662 aaKnown RBP eCLIP15.74■□□□□ 0.119e-15■□□□□ 11.2
USP48-210ENST00000489108 KLF7O75840 302 aaPredicted RBP15.74■□□□□ 0.11
USP48-210ENST00000489108 MTHFD1P11586 935 aaKnown RBP15.74■□□□□ 0.11
USP48-210ENST00000489108 POLR2CP19387 275 aaPredicted RBP15.74■□□□□ 0.11
USP48-210ENST00000489108 CYP2A7P20853 494 aa15.74■□□□□ 0.11
USP48-210ENST00000489108 CTSCP53634 463 aa15.74■□□□□ 0.11
USP48-210ENST00000489108 XRCC4Q13426 336 aa15.74■□□□□ 0.11
USP48-210ENST00000489108 PIGHQ14442 188 aaPredicted RBP15.74■□□□□ 0.11
USP48-210ENST00000489108 SSPNQ14714 243 aa15.74■□□□□ 0.11
USP48-210ENST00000489108 DUS1LQ6P1R4 473 aaKnown RBP15.74■□□□□ 0.11
USP48-210ENST00000489108 ZNF571Q7Z3V5 609 aaPredicted RBP15.74■□□□□ 0.11
USP48-210ENST00000489108 CNTD1Q8N815 330 aa15.74■□□□□ 0.11
USP48-210ENST00000489108 RASGEF1AQ8N9B8 481 aa15.74■□□□□ 0.11
USP48-210ENST00000489108 FAM71BQ8TC56 605 aa15.74■□□□□ 0.11
USP48-210ENST00000489108 BRSK1Q8TDC3 778 aa15.74■□□□□ 0.11
USP48-210ENST00000489108 BTBD6Q96KE9 485 aa15.74■□□□□ 0.11
USP48-210ENST00000489108 IP6K3Q96PC2 410 aa15.74■□□□□ 0.11
USP48-210ENST00000489108 SLC7A5P2Q9GIP4 190 aa15.74■□□□□ 0.11
USP48-210ENST00000489108 HAUS4Q9H6D7 363 aa15.74■□□□□ 0.11
USP48-210ENST00000489108 CSAG2Q9Y5P2 127 aa15.74■□□□□ 0.11
USP48-210ENST00000489108 FER1L5A0AVI2 2057 aa15.74■□□□□ 0.11
USP48-210ENST00000489108 HIVEP1P15822 2718 aa15.74■□□□□ 0.11
USP48-210ENST00000489108 C9J4A7 227 aa15.73■□□□□ 0.11
USP48-210ENST00000489108 KCNK1O00180 336 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms