RNA–Protein interactions for RNA: ENST00000489053.1

HDAC6-232, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-232ENST00000489053 C12orf66Q96MD2 445 aa8.95□□□□□ -0.98
HDAC6-232ENST00000489053 NAP1L3Q99457 506 aaPredicted RBP8.95□□□□□ -0.98
HDAC6-232ENST00000489053 CTRCQ99895 268 aa8.95□□□□□ -0.98
HDAC6-232ENST00000489053 C19orf43Q9BQ61 176 aa8.95□□□□□ -0.98
HDAC6-232ENST00000489053 GORASP1Q9BQQ3 440 aa8.95□□□□□ -0.98
HDAC6-232ENST00000489053 CCM2Q9BSQ5 444 aa8.95□□□□□ -0.98
HDAC6-232ENST00000489053 DDA1Q9BW61 102 aa8.95□□□□□ -0.98
HDAC6-232ENST00000489053 TSSK1BQ9BXA7 367 aa8.95□□□□□ -0.98
HDAC6-232ENST00000489053 B3GNT4Q9C0J1 378 aa8.95□□□□□ -0.98
HDAC6-232ENST00000489053 WWP1Q9H0M0 922 aa8.95□□□□□ -0.98
HDAC6-232ENST00000489053 ARNT2Q9HBZ2 717 aa8.95□□□□□ -0.98
HDAC6-232ENST00000489053 SMARCAL1Q9NZC9 954 aa8.95□□□□□ -0.98
HDAC6-232ENST00000489053 TMEM9Q9P0T7 183 aa8.95□□□□□ -0.98
HDAC6-232ENST00000489053 SCHIP1Q9P0W5 487 aaPredicted RBP8.95□□□□□ -0.98
HDAC6-232ENST00000489053 TMPRSS11EQ9UL52 423 aa8.95□□□□□ -0.98
HDAC6-232ENST00000489053 ZKSCAN5Q9Y2L8 839 aa8.95□□□□□ -0.98
HDAC6-232ENST00000489053 PPP2R2CQ9Y2T4 447 aa8.95□□□□□ -0.98
HDAC6-232ENST00000489053 BPTFQ12830 3046 aa8.95□□□□□ -0.98
HDAC6-232ENST00000489053 LRP4O75096 1905 aa8.94□□□□□ -0.98
HDAC6-232ENST00000489053 PIEZO2Q9H5I5 2752 aa8.94□□□□□ -0.98
HDAC6-232ENST00000489053 UBA6A0AVT1 1052 aaPredicted RBP8.94□□□□□ -0.98
HDAC6-232ENST00000489053 ERVH48-1M5A8F1 160 aa8.94□□□□□ -0.98
HDAC6-232ENST00000489053 CCL22O00626 93 aa8.94□□□□□ -0.98
HDAC6-232ENST00000489053 PFDN6O15212 129 aa8.94□□□□□ -0.98
HDAC6-232ENST00000489053 TOX3O15405 576 aaPredicted RBP8.94□□□□□ -0.98
HDAC6-232ENST00000489053 CAPN5O15484 640 aaPredicted RBP8.94□□□□□ -0.98
HDAC6-232ENST00000489053 LDB2O43679 373 aa8.94□□□□□ -0.98
HDAC6-232ENST00000489053 FTH1P02794 183 aa8.94□□□□□ -0.98
HDAC6-232ENST00000489053 FGF3P11487 239 aaPredicted RBP8.94□□□□□ -0.98
HDAC6-232ENST00000489053 MTHFD1P11586 935 aaKnown RBP8.94□□□□□ -0.98
HDAC6-232ENST00000489053 NDUFS1P28331 727 aa8.94□□□□□ -0.98
HDAC6-232ENST00000489053 ETV5P41161 510 aa8.94□□□□□ -0.98
HDAC6-232ENST00000489053 PRAMEP78395 509 aa8.94□□□□□ -0.98
HDAC6-232ENST00000489053 SARNPP82979 210 aaKnown RBP8.94□□□□□ -0.98
HDAC6-232ENST00000489053 DMPKQ09013 629 aa8.94□□□□□ -0.98
HDAC6-232ENST00000489053 RPE65Q16518 533 aa8.94□□□□□ -0.98
HDAC6-232ENST00000489053 CCNG2Q16589 344 aa8.94□□□□□ -0.98
HDAC6-232ENST00000489053 BCL7AQ4VC05 210 aa8.94□□□□□ -0.98
HDAC6-232ENST00000489053 CCDC38Q502W7 563 aa8.94□□□□□ -0.98
HDAC6-232ENST00000489053 FASTKD1Q53R41 847 aaKnown RBP8.94□□□□□ -0.98
HDAC6-232ENST00000489053 AARS2Q5JTZ9 985 aaKnown RBP8.94□□□□□ -0.98
HDAC6-232ENST00000489053 DNTTIP2Q5QJE6 756 aaKnown RBP8.94□□□□□ -0.98
HDAC6-232ENST00000489053 TMTC4Q5T4D3 741 aa8.94□□□□□ -0.98
HDAC6-232ENST00000489053 CACHD1Q5VU97 1274 aa8.94□□□□□ -0.98
HDAC6-232ENST00000489053 LYPLAL1Q5VWZ2 237 aa8.94□□□□□ -0.98
HDAC6-232ENST00000489053 ANKS6Q68DC2 871 aa8.94□□□□□ -0.98
HDAC6-232ENST00000489053 AFTPHQ6ULP2 937 aa8.94□□□□□ -0.98
HDAC6-232ENST00000489053 FAM92BQ6ZTR7 304 aa8.94□□□□□ -0.98
HDAC6-232ENST00000489053 VASH2Q86V25 355 aa8.94□□□□□ -0.98
HDAC6-232ENST00000489053 SERPINA9Q86WD7 417 aa8.94□□□□□ -0.98
HDAC6-232ENST00000489053 OOSP2Q86WS3 158 aa8.94□□□□□ -0.98
HDAC6-232ENST00000489053 RASGRP3Q8IV61 690 aa8.94□□□□□ -0.98
HDAC6-232ENST00000489053 OR52K1Q8NGK4 314 aa8.94□□□□□ -0.98
HDAC6-232ENST00000489053 OR2L2Q8NH16 312 aa8.94□□□□□ -0.98
HDAC6-232ENST00000489053 HM13Q8TCT9 377 aa8.94□□□□□ -0.98
HDAC6-232ENST00000489053 RTP4Q96DX8 246 aa8.94□□□□□ -0.98
HDAC6-232ENST00000489053 ETNK1Q9HBU6 452 aa8.94□□□□□ -0.98
HDAC6-232ENST00000489053 SLC40A1Q9NP59 571 aa8.94□□□□□ -0.98
HDAC6-232ENST00000489053 NLE1Q9NVX2 485 aaPredicted RBP8.94□□□□□ -0.98
HDAC6-232ENST00000489053 ZDHHC3Q9NYG2 299 aa8.94□□□□□ -0.98
HDAC6-232ENST00000489053 FOXJ2Q9P0K8 574 aa8.94□□□□□ -0.98
HDAC6-232ENST00000489053 ZNF624Q9P2J8 865 aaPredicted RBP8.94□□□□□ -0.98
HDAC6-232ENST00000489053 ACSL6Q9UKU0 697 aa8.94□□□□□ -0.98
HDAC6-232ENST00000489053 PCDHGA3Q9Y5H0 932 aa8.94□□□□□ -0.98
HDAC6-232ENST00000489053 AHCTF1Q8WYP5 2266 aa8.93□□□□□ -0.98
HDAC6-232ENST00000489053 PTPRQQ9UMZ3 2332 aa8.93□□□□□ -0.98
HDAC6-232ENST00000489053 GOLGA6L10A0A0M3HER8 536 aa8.93□□□□□ -0.98
HDAC6-232ENST00000489053 C9orf172C9J069 976 aa8.93□□□□□ -0.98
HDAC6-232ENST00000489053 GAPDHSO14556 408 aaPredicted RBP8.93□□□□□ -0.98
HDAC6-232ENST00000489053 KIF5CO60282 957 aa8.93□□□□□ -0.98
HDAC6-232ENST00000489053 KDM1AO60341 852 aa8.93□□□□□ -0.98
HDAC6-232ENST00000489053 AP2A2O94973 939 aa8.93□□□□□ -0.98
HDAC6-232ENST00000489053 GSTM1P09488 218 aa8.93□□□□□ -0.98
HDAC6-232ENST00000489053 ANKRD34CP0C6C1 535 aa8.93□□□□□ -0.98
HDAC6-232ENST00000489053 OR56A5P0C7T3 313 aa8.93□□□□□ -0.98
HDAC6-232ENST00000489053 ADRA1DP25100 572 aa8.93□□□□□ -0.98
HDAC6-232ENST00000489053 ACRV1P26436 265 aa8.93□□□□□ -0.98
HDAC6-232ENST00000489053 NSG1P42857 185 aa8.93□□□□□ -0.98
HDAC6-232ENST00000489053 PRLHRP49683 370 aa8.93□□□□□ -0.98
HDAC6-232ENST00000489053 GFERP55789 205 aa8.93□□□□□ -0.98
HDAC6-232ENST00000489053 GSTM4Q03013 218 aa8.93□□□□□ -0.98
HDAC6-232ENST00000489053 CLCA4Q14CN2 919 aa8.93□□□□□ -0.98
HDAC6-232ENST00000489053 TGIF1Q15583 401 aa8.93□□□□□ -0.98
HDAC6-232ENST00000489053 OASLQ15646 514 aaKnown RBP8.93□□□□□ -0.98
HDAC6-232ENST00000489053 METRNLQ641Q3 311 aa8.93□□□□□ -0.98
HDAC6-232ENST00000489053 KCTD11Q693B1 232 aa8.93□□□□□ -0.98
HDAC6-232ENST00000489053 DENND5AQ6IQ26 1287 aa8.93□□□□□ -0.98
HDAC6-232ENST00000489053 ZNF662Q6ZS27 426 aa8.93□□□□□ -0.98
HDAC6-232ENST00000489053 C11orf96Q7Z7L8 435 aa8.93□□□□□ -0.98
HDAC6-232ENST00000489053 CACNA2D3Q8IZS8 1091 aa8.93□□□□□ -0.98
HDAC6-232ENST00000489053 SIDT2Q8NBJ9 832 aaKnown RBP8.93□□□□□ -0.98
HDAC6-232ENST00000489053 LCN9Q8WX39 176 aa8.93□□□□□ -0.98
HDAC6-232ENST00000489053 SLC39A7Q92504 469 aa8.93□□□□□ -0.98
HDAC6-232ENST00000489053 UBXN4Q92575 508 aa8.93□□□□□ -0.98
HDAC6-232ENST00000489053 STAMBPL1Q96FJ0 436 aa8.93□□□□□ -0.98
HDAC6-232ENST00000489053 CDKN2AIPNLQ96HQ2 116 aa8.93□□□□□ -0.98
HDAC6-232ENST00000489053 ELMO2Q96JJ3 720 aa8.93□□□□□ -0.98
HDAC6-232ENST00000489053 C9orf72Q96LT7 481 aa8.93□□□□□ -0.98
HDAC6-232ENST00000489053 FERD3LQ96RJ6 166 aa8.93□□□□□ -0.98
HDAC6-232ENST00000489053 EFHD1Q9BUP0 239 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms