RNA–Protein interactions for RNA: ENST00000488923.1

HDLBP-243, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 582 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-243ENST00000488923 BBS2Q9BXC9 721 aa6.54□□□□□ -1.36
HDLBP-243ENST00000488923 SHCBP1LQ9BZQ2 653 aa6.54□□□□□ -1.36
HDLBP-243ENST00000488923 VCXQ9H320 206 aa6.54□□□□□ -1.36
HDLBP-243ENST00000488923 MUC13Q9H3R2 512 aa6.54□□□□□ -1.36
HDLBP-243ENST00000488923 RDH14Q9HBH5 336 aa6.54□□□□□ -1.36
HDLBP-243ENST00000488923 BPIFA1Q9NP55 256 aa6.54□□□□□ -1.36
HDLBP-243ENST00000488923 SPAG4Q9NPE6 437 aa6.54□□□□□ -1.36
HDLBP-243ENST00000488923 IL26Q9NPH9 171 aa6.54□□□□□ -1.36
HDLBP-243ENST00000488923 SPHK2Q9NRA0 654 aa6.54□□□□□ -1.36
HDLBP-243ENST00000488923 SMOXQ9NWM0 555 aa6.54□□□□□ -1.36
HDLBP-243ENST00000488923 HECAQ9UBI9 543 aaPredicted RBP6.54□□□□□ -1.36
HDLBP-243ENST00000488923 NKX1-2Q9UD57 310 aaPredicted RBP6.54□□□□□ -1.36
HDLBP-243ENST00000488923 PCTPQ9UKL6 214 aa6.54□□□□□ -1.36
HDLBP-243ENST00000488923 SARDHQ9UL12 918 aa6.54□□□□□ -1.36
HDLBP-243ENST00000488923 MED16Q9Y2X0 877 aa6.54□□□□□ -1.36
HDLBP-243ENST00000488923 FIS1Q9Y3D6 152 aa6.54□□□□□ -1.36
HDLBP-243ENST00000488923 OARD1Q9Y530 152 aa6.54□□□□□ -1.36
HDLBP-243ENST00000488923 DNAJC15Q9Y5T4 150 aa6.54□□□□□ -1.36
HDLBP-243ENST00000488923 SRCAPQ6ZRS2 3230 aa6.54□□□□□ -1.36
HDLBP-243ENST00000488923 SCN5AQ14524 2016 aa6.54□□□□□ -1.36
HDLBP-243ENST00000488923 TET1Q8NFU7 2136 aa6.53□□□□□ -1.36
HDLBP-243ENST00000488923 MIA3Q5JRA6 1907 aa6.53□□□□□ -1.36
HDLBP-243ENST00000488923 C15orf38-AP3S2A0A0A6YYH1 394 aa6.53□□□□□ -1.36
HDLBP-243ENST00000488923 TSPAN11A1L157 253 aa6.53□□□□□ -1.36
HDLBP-243ENST00000488923 NPEPPSL1A6NEC2 478 aa6.53□□□□□ -1.36
HDLBP-243ENST00000488923 TMEM233B4DJY2 109 aa6.53□□□□□ -1.36
HDLBP-243ENST00000488923 K7ERQ8 282 aa6.53□□□□□ -1.36
HDLBP-243ENST00000488923 MEN1O00255 615 aa6.53□□□□□ -1.36
HDLBP-243ENST00000488923 UBFD1O14562 309 aaKnown RBP6.53□□□□□ -1.36
HDLBP-243ENST00000488923 MRASO14807 208 aa6.53□□□□□ -1.36
HDLBP-243ENST00000488923 CASQ2O14958 399 aaPredicted RBP6.53□□□□□ -1.36
HDLBP-243ENST00000488923 PIP5K1BO14986 540 aa6.53□□□□□ -1.36
HDLBP-243ENST00000488923 ANGPT2O15123 496 aa6.53□□□□□ -1.36
HDLBP-243ENST00000488923 SLC16A5O15375 505 aa6.53□□□□□ -1.36
HDLBP-243ENST00000488923 CCL16O15467 120 aa6.53□□□□□ -1.36
HDLBP-243ENST00000488923 WDR47O94967 919 aa6.53□□□□□ -1.36
HDLBP-243ENST00000488923 TSPAN12O95859 305 aa6.53□□□□□ -1.36
HDLBP-243ENST00000488923 MT-CO1P00395 513 aa6.53□□□□□ -1.36
HDLBP-243ENST00000488923 C8GP07360 202 aa6.53□□□□□ -1.36
HDLBP-243ENST00000488923 RHOP08100 348 aa6.53□□□□□ -1.36
HDLBP-243ENST00000488923 ALPIP09923 528 aa6.53□□□□□ -1.36
HDLBP-243ENST00000488923 LINC00271P0C7V0 271 aa6.53□□□□□ -1.36
HDLBP-243ENST00000488923 MPC1LP0DKB6 136 aa6.53□□□□□ -1.36
HDLBP-243ENST00000488923 BPIP17213 487 aa6.53□□□□□ -1.36
HDLBP-243ENST00000488923 CTPS1P17812 591 aa6.53□□□□□ -1.36
HDLBP-243ENST00000488923 VCLP18206 1134 aa6.53□□□□□ -1.36
HDLBP-243ENST00000488923 POLR2EP19388 210 aaKnown RBP6.53□□□□□ -1.36
HDLBP-243ENST00000488923 ITGB8P26012 769 aa6.53□□□□□ -1.36
HDLBP-243ENST00000488923 HLA-FP30511 346 aa6.53□□□□□ -1.36
HDLBP-243ENST00000488923 CCR10P46092 362 aa6.53□□□□□ -1.36
HDLBP-243ENST00000488923 KCNC1P48547 511 aa6.53□□□□□ -1.36
HDLBP-243ENST00000488923 CCR3P51677 355 aa6.53□□□□□ -1.36
HDLBP-243ENST00000488923 CCNHP51946 323 aaPredicted RBP6.53□□□□□ -1.36
HDLBP-243ENST00000488923 PGGT1BP53609 377 aa6.53□□□□□ -1.36
HDLBP-243ENST00000488923 C1QTNF8P60827 252 aa6.53□□□□□ -1.36
HDLBP-243ENST00000488923 PSME3P61289 254 aa6.53□□□□□ -1.36
HDLBP-243ENST00000488923 ST8SIA6P61647 398 aa6.53□□□□□ -1.36
HDLBP-243ENST00000488923 ERVK-8P63133 956 aa6.53□□□□□ -1.36
HDLBP-243ENST00000488923 HTRA3P83110 453 aa6.53□□□□□ -1.36
HDLBP-243ENST00000488923 ZXDBP98169 803 aa6.53□□□□□ -1.36
HDLBP-243ENST00000488923 CDKL1Q00532 357 aa6.53□□□□□ -1.36
HDLBP-243ENST00000488923 ZNF33BQ06732 778 aa6.53□□□□□ -1.36
HDLBP-243ENST00000488923 KLC1Q07866 573 aa6.53□□□□□ -1.36
HDLBP-243ENST00000488923 BNIP2Q12982 314 aa6.53□□□□□ -1.36
HDLBP-243ENST00000488923 MAD2L1Q13257 205 aaPredicted RBP6.53□□□□□ -1.36
HDLBP-243ENST00000488923 SP140Q13342 867 aa6.53□□□□□ -1.36
HDLBP-243ENST00000488923 FLOT2Q14254 428 aa6.53□□□□□ -1.36
HDLBP-243ENST00000488923 ZNF77Q15935 545 aa6.53□□□□□ -1.36
HDLBP-243ENST00000488923 RBBP7Q16576 425 aa6.53□□□□□ -1.36
HDLBP-243ENST00000488923 CDKN3Q16667 212 aa6.53□□□□□ -1.36
HDLBP-243ENST00000488923 ACCSLQ4AC99 568 aa6.53□□□□□ -1.36
HDLBP-243ENST00000488923 AGKQ53H12 422 aa6.53□□□□□ -1.36
HDLBP-243ENST00000488923 SETMARQ53H47 684 aaPredicted RBP6.53□□□□□ -1.36
HDLBP-243ENST00000488923 PIGGQ5H8A4 983 aa6.53□□□□□ -1.36
HDLBP-243ENST00000488923 DGKKQ5KSL6 1271 aa6.53□□□□□ -1.36
HDLBP-243ENST00000488923 RARS2Q5T160 578 aaKnown RBP6.53□□□□□ -1.36
HDLBP-243ENST00000488923 PLPP4Q5VZY2 271 aa6.53□□□□□ -1.36
HDLBP-243ENST00000488923 TMEM198Q66K66 360 aa6.53□□□□□ -1.36
HDLBP-243ENST00000488923 IRGCQ6NXR0 463 aa6.53□□□□□ -1.36
HDLBP-243ENST00000488923 FAM151BQ6UXP7 276 aa6.53□□□□□ -1.36
HDLBP-243ENST00000488923 GDPD4Q6W3E5 623 aa6.53□□□□□ -1.36
HDLBP-243ENST00000488923 LINC00114Q6XXX2 140 aa6.53□□□□□ -1.36
HDLBP-243ENST00000488923 NEK10Q6ZWH5 1172 aa6.53□□□□□ -1.36
HDLBP-243ENST00000488923 ARPINQ7Z6K5 226 aa6.53□□□□□ -1.36
HDLBP-243ENST00000488923 TMCO2Q7Z6W1 182 aaPredicted RBP6.53□□□□□ -1.36
HDLBP-243ENST00000488923 KIAA0907Q7Z7F0 614 aaPredicted RBP6.53□□□□□ -1.36
HDLBP-243ENST00000488923 CELF5Q8N6W0 485 aaKnown RBP6.53□□□□□ -1.36
HDLBP-243ENST00000488923 SIDT2Q8NBJ9 832 aaKnown RBP6.53□□□□□ -1.36
HDLBP-243ENST00000488923 FBXO27Q8NI29 283 aa6.53□□□□□ -1.36
HDLBP-243ENST00000488923 SPPL3Q8TCT6 385 aa6.53□□□□□ -1.36
HDLBP-243ENST00000488923 WFDC5Q8TCV5 224 aa6.53□□□□□ -1.36
HDLBP-243ENST00000488923 MICAL1Q8TDZ2 1067 aa6.53□□□□□ -1.36
HDLBP-243ENST00000488923 TRPC4APQ8TEL6 797 aa6.53□□□□□ -1.36
HDLBP-243ENST00000488923 EEF1AKMT1Q8WVE0 214 aa6.53□□□□□ -1.36
HDLBP-243ENST00000488923 POF1BQ8WVV4 589 aa6.53□□□□□ -1.36
HDLBP-243ENST00000488923 PBXIP1Q96AQ6 731 aa6.53□□□□□ -1.36
HDLBP-243ENST00000488923 TUBGCP3Q96CW5 907 aa6.53□□□□□ -1.36
HDLBP-243ENST00000488923 RCN3Q96D15 328 aa6.53□□□□□ -1.36
HDLBP-243ENST00000488923 ASB9Q96DX5 294 aa6.53□□□□□ -1.36
HDLBP-243ENST00000488923 DCUN1D1Q96GG9 259 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms