RNA–Protein interactions for RNA: ENST00000488860.1

TRAIP-209, Transcript of TRAF interacting protein, humanhuman

TSL 3

Gene TRAIP, Length 326 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-209ENST00000488860 ANKRD7Q92527 254 aa12.11□□□□□ -0.47
TRAIP-209ENST00000488860 KCNJ9Q92806 393 aa12.11□□□□□ -0.47
TRAIP-209ENST00000488860 TSPAN17Q96FV3 270 aa12.11□□□□□ -0.47
TRAIP-209ENST00000488860 SCARF2Q96GP6 870 aaPredicted RBP12.11□□□□□ -0.47
TRAIP-209ENST00000488860 TIMM29Q9BSF4 260 aa12.11□□□□□ -0.47
TRAIP-209ENST00000488860 MCMBPQ9BTE3 642 aa12.11□□□□□ -0.47
TRAIP-209ENST00000488860 LRRC61Q9BV99 259 aa12.11□□□□□ -0.47
TRAIP-209ENST00000488860 CAPN10Q9HC96 672 aa12.11□□□□□ -0.47
TRAIP-209ENST00000488860 KLC4Q9NSK0 619 aa12.11□□□□□ -0.47
TRAIP-209ENST00000488860 TAS2R13Q9NYV9 303 aa12.11□□□□□ -0.47
TRAIP-209ENST00000488860 GALPQ9UBC7 116 aa12.11□□□□□ -0.47
TRAIP-209ENST00000488860 SLC23A2Q9UGH3 650 aa12.11□□□□□ -0.47
TRAIP-209ENST00000488860 VWA7Q9Y334 891 aa12.11□□□□□ -0.47
TRAIP-209ENST00000488860 NFS1Q9Y697 457 aa12.11□□□□□ -0.47
TRAIP-209ENST00000488860 DGKBQ9Y6T7 804 aa12.11□□□□□ -0.47
TRAIP-209ENST00000488860 LAMA1P25391 3075 aa12.11□□□□□ -0.47
TRAIP-209ENST00000488860 CACNA1HO95180 2353 aa12.1□□□□□ -0.47
TRAIP-209ENST00000488860 MGAT4DA6NG13 374 aa12.1□□□□□ -0.47
TRAIP-209ENST00000488860 TPP1O14773 563 aa12.1□□□□□ -0.47
TRAIP-209ENST00000488860 PHGDHO43175 533 aaKnown RBP12.1□□□□□ -0.47
TRAIP-209ENST00000488860 SNX2O60749 519 aa12.1□□□□□ -0.47
TRAIP-209ENST00000488860 TCEA3O75764 348 aa12.1□□□□□ -0.47
TRAIP-209ENST00000488860 CER1O95813 267 aa12.1□□□□□ -0.47
TRAIP-209ENST00000488860 LMNAP02545 664 aaKnown RBP12.1□□□□□ -0.47
TRAIP-209ENST00000488860 APOA4P06727 396 aa12.1□□□□□ -0.47
TRAIP-209ENST00000488860 SNRPAP09012 282 aaKnown RBP12.1□□□□□ -0.47
TRAIP-209ENST00000488860 STMN1P16949 149 aa12.1□□□□□ -0.47
TRAIP-209ENST00000488860 ENGP17813 658 aa12.1□□□□□ -0.47
TRAIP-209ENST00000488860 KRT15P19012 456 aa12.1□□□□□ -0.47
TRAIP-209ENST00000488860 CCR7P32248 378 aa12.1□□□□□ -0.47
TRAIP-209ENST00000488860 ACTR1BP42025 376 aa12.1□□□□□ -0.47
TRAIP-209ENST00000488860 PREPP48147 710 aa12.1□□□□□ -0.47
TRAIP-209ENST00000488860 ARRB1P49407 418 aaPredicted RBP12.1□□□□□ -0.47
TRAIP-209ENST00000488860 ATXN3P54252 364 aaPredicted RBP12.1□□□□□ -0.47
TRAIP-209ENST00000488860 TAS2R39P59534 338 aa12.1□□□□□ -0.47
TRAIP-209ENST00000488860 ACTR1AP61163 376 aa12.1□□□□□ -0.47
TRAIP-209ENST00000488860 HNRNPKP61978 463 aaKnown RBP eCLIP12.1□□□□□ -0.47
TRAIP-209ENST00000488860 ARHGAP8P85298 464 aa12.1□□□□□ -0.47
TRAIP-209ENST00000488860 CTBSQ01459 385 aa12.1□□□□□ -0.47
TRAIP-209ENST00000488860 POU4F1Q01851 419 aa12.1□□□□□ -0.47
TRAIP-209ENST00000488860 SPEM2Q0P670 501 aa12.1□□□□□ -0.47
TRAIP-209ENST00000488860 HSPA14Q0VDF9 509 aa12.1□□□□□ -0.47
TRAIP-209ENST00000488860 ILF2Q12905 390 aaKnown RBP12.1□□□□□ -0.47
TRAIP-209ENST00000488860 ILF3Q12906 894 aaKnown RBP eCLIP12.1□□□□□ -0.47
TRAIP-209ENST00000488860 TTLL9Q3SXZ7 439 aa12.1□□□□□ -0.47
TRAIP-209ENST00000488860 UGT3A1Q6NUS8 523 aa12.1□□□□□ -0.47
TRAIP-209ENST00000488860 IL27RAQ6UWB1 636 aa12.1□□□□□ -0.47
TRAIP-209ENST00000488860 FAM83HQ6ZRV2 1179 aaPredicted RBP12.1□□□□□ -0.47
TRAIP-209ENST00000488860 C11orf96Q7Z7L8 435 aa12.1□□□□□ -0.47
TRAIP-209ENST00000488860 TDRPQ86YL5 185 aa12.1□□□□□ -0.47
TRAIP-209ENST00000488860 CFAP206Q8IYR0 622 aa12.1□□□□□ -0.47
TRAIP-209ENST00000488860 RIBC1Q8N443 379 aaPredicted RBP12.1□□□□□ -0.47
TRAIP-209ENST00000488860 ZBTB2Q8N680 514 aa12.1□□□□□ -0.47
TRAIP-209ENST00000488860 LILRA3Q8N6C8 439 aaPredicted RBP12.1□□□□□ -0.47
TRAIP-209ENST00000488860 OR2L2Q8NH16 312 aa12.1□□□□□ -0.47
TRAIP-209ENST00000488860 GIMAP7Q8NHV1 300 aa12.1□□□□□ -0.47
TRAIP-209ENST00000488860 CCL4L1Q8NHW4 92 aa12.1□□□□□ -0.47
TRAIP-209ENST00000488860 CD200R1Q8TD46 325 aa12.1□□□□□ -0.47
TRAIP-209ENST00000488860 LINC00615Q96LM1 132 aaPredicted RBP12.1□□□□□ -0.47
TRAIP-209ENST00000488860 ELF4Q99607 663 aaPredicted RBP12.1□□□□□ -0.47
TRAIP-209ENST00000488860 SLC30A3Q99726 388 aa12.1□□□□□ -0.47
TRAIP-209ENST00000488860 GSDMCQ9BYG8 508 aa12.1□□□□□ -0.47
TRAIP-209ENST00000488860 ROPN1BQ9BZX4 212 aaPredicted RBP12.1□□□□□ -0.47
TRAIP-209ENST00000488860 GAREM1Q9H706 876 aa12.1□□□□□ -0.47
TRAIP-209ENST00000488860 COG4Q9H9E3 785 aa12.1□□□□□ -0.47
TRAIP-209ENST00000488860 ERVMER34-1Q9H9K5 563 aa12.1□□□□□ -0.47
TRAIP-209ENST00000488860 ROPN1Q9HAT0 212 aaPredicted RBP12.1□□□□□ -0.47
TRAIP-209ENST00000488860 SNX15Q9NRS6 342 aa12.1□□□□□ -0.47
TRAIP-209ENST00000488860 SPATS2LQ9NUQ6 558 aaKnown RBP12.1□□□□□ -0.47
TRAIP-209ENST00000488860 SPASTQ9UBP0 616 aa12.1□□□□□ -0.47
TRAIP-209ENST00000488860 DOLKQ9UPQ8 538 aa12.1□□□□□ -0.47
TRAIP-209ENST00000488860 MYO15AQ9UKN7 3530 aa12.1□□□□□ -0.47
TRAIP-209ENST00000488860 HMX2A2RU54 273 aa12.09□□□□□ -0.47
TRAIP-209ENST00000488860 GOLGA6L10A6NI86 522 aa12.09□□□□□ -0.47
TRAIP-209ENST00000488860 PDZK1P1A8MUH7 402 aa12.09□□□□□ -0.47
TRAIP-209ENST00000488860 ARHGAP33O14559 1287 aa12.09□□□□□ -0.47
TRAIP-209ENST00000488860 DYNC1I1O14576 645 aa12.09□□□□□ -0.47
TRAIP-209ENST00000488860 AQP9O43315 295 aa12.09□□□□□ -0.47
TRAIP-209ENST00000488860 PIAS2O75928 621 aa12.09□□□□□ -0.47
TRAIP-209ENST00000488860 GSTM1P09488 218 aa12.09□□□□□ -0.47
TRAIP-209ENST00000488860 AOAHP28039 575 aa12.09□□□□□ -0.47
TRAIP-209ENST00000488860 CCT8P50990 548 aa12.09□□□□□ -0.47
TRAIP-209ENST00000488860 CLCN7P51798 805 aa12.09□□□□□ -0.47
TRAIP-209ENST00000488860 RAB10P61026 200 aa12.09□□□□□ -0.47
TRAIP-209ENST00000488860 IRX4P78413 519 aa12.09□□□□□ -0.47
TRAIP-209ENST00000488860 GSTM4Q03013 218 aa12.09□□□□□ -0.47
TRAIP-209ENST00000488860 LRP8Q14114 963 aa12.09□□□□□ -0.47
TRAIP-209ENST00000488860 ZNF423Q2M1K9 1284 aa12.09□□□□□ -0.47
TRAIP-209ENST00000488860 HLA-BQ31612 363 aa12.09□□□□□ -0.47
TRAIP-209ENST00000488860 TAF1BQ53T94 588 aaPredicted RBP12.09□□□□□ -0.47
TRAIP-209ENST00000488860 PLA2G2CQ5R387 149 aa12.09□□□□□ -0.47
TRAIP-209ENST00000488860 TAF8Q7Z7C8 310 aa12.09□□□□□ -0.47
TRAIP-209ENST00000488860 CEP97Q8IW35 865 aa12.09□□□□□ -0.47
TRAIP-209ENST00000488860 CPNE9Q8IYJ1 553 aa12.09□□□□□ -0.47
TRAIP-209ENST00000488860 IQCKQ8N0W5 287 aa12.09□□□□□ -0.47
TRAIP-209ENST00000488860 ZNF548Q8NEK5 533 aaPredicted RBP12.09□□□□□ -0.47
TRAIP-209ENST00000488860 SKA2Q8WVK7 121 aaPredicted RBP12.09□□□□□ -0.47
TRAIP-209ENST00000488860 TMEM159Q96B96 161 aa12.09□□□□□ -0.47
TRAIP-209ENST00000488860 MTBPQ96DY7 904 aa12.09□□□□□ -0.47
TRAIP-209ENST00000488860 ZDHHC5Q9C0B5 715 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms