RNA–Protein interactions for RNA: ENST00000488494.5

ITGB1-215, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-215ENST00000488494 MTHFD1P11586 935 aaKnown RBP17.38■□□□□ 0.37
ITGB1-215ENST00000488494 ETS1P14921 441 aa17.38■□□□□ 0.37
ITGB1-215ENST00000488494 AMD1P17707 334 aa17.38■□□□□ 0.37
ITGB1-215ENST00000488494 ACRV1P26436 265 aa17.38■□□□□ 0.37
ITGB1-215ENST00000488494 FDFT1P37268 417 aa17.38■□□□□ 0.37
ITGB1-215ENST00000488494 LEPRP48357 1165 aaKnown RBP17.38■□□□□ 0.37
ITGB1-215ENST00000488494 LMAN1P49257 510 aa17.38■□□□□ 0.37
ITGB1-215ENST00000488494 PRLHRP49683 370 aa17.38■□□□□ 0.37
ITGB1-215ENST00000488494 RAB15P59190 212 aa17.38■□□□□ 0.37
ITGB1-215ENST00000488494 SIX1Q15475 284 aaPredicted RBP17.38■□□□□ 0.37
ITGB1-215ENST00000488494 CCDC38Q502W7 563 aa17.38■□□□□ 0.37
ITGB1-215ENST00000488494 ANKS6Q68DC2 871 aa17.38■□□□□ 0.37
ITGB1-215ENST00000488494 INO80CQ6PI98 192 aaPredicted RBP17.38■□□□□ 0.37
ITGB1-215ENST00000488494 XKR5Q6UX68 686 aa17.38■□□□□ 0.37
ITGB1-215ENST00000488494 PPP1R21Q6ZMI0 780 aa17.38■□□□□ 0.37
ITGB1-215ENST00000488494 DNAAF3Q8N9W5 541 aa17.38■□□□□ 0.37
ITGB1-215ENST00000488494 GLIS1Q8NBF1 620 aa17.38■□□□□ 0.37
ITGB1-215ENST00000488494 TRIM58Q8NG06 486 aa17.38■□□□□ 0.37
ITGB1-215ENST00000488494 OR2L2Q8NH16 312 aa17.38■□□□□ 0.37
ITGB1-215ENST00000488494 WWP1Q9H0M0 922 aa17.38■□□□□ 0.37
ITGB1-215ENST00000488494 ETNK1Q9HBU6 452 aa17.38■□□□□ 0.37
ITGB1-215ENST00000488494 RAB6BQ9NRW1 208 aa17.38■□□□□ 0.37
ITGB1-215ENST00000488494 PPP2R2CQ9Y2T4 447 aa17.38■□□□□ 0.37
ITGB1-215ENST00000488494 CFAP20Q9Y6A4 193 aaKnown RBP17.38■□□□□ 0.37
ITGB1-215ENST00000488494 AHCTF1Q8WYP5 2266 aa17.37■□□□□ 0.37
ITGB1-215ENST00000488494 TRBV5-4A0A0C4DH59 114 aa17.37■□□□□ 0.37
ITGB1-215ENST00000488494 KLHL33A6NCF5 533 aa17.37■□□□□ 0.37
ITGB1-215ENST00000488494 MROH6A6NGR9 719 aa17.37■□□□□ 0.37
ITGB1-215ENST00000488494 IQCJ-SCHIP1C9J366 451 aaPredicted RBP17.37■□□□□ 0.37
ITGB1-215ENST00000488494 H7C0S8 307 aa17.37■□□□□ 0.37
ITGB1-215ENST00000488494 ATXN7O15265 892 aaPredicted RBP17.37■□□□□ 0.37
ITGB1-215ENST00000488494 CAPN5O15484 640 aaPredicted RBP17.37■□□□□ 0.37
ITGB1-215ENST00000488494 FGGP02679 453 aa17.37■□□□□ 0.37
ITGB1-215ENST00000488494 C9P02748 559 aa17.37■□□□□ 0.37
ITGB1-215ENST00000488494 ANKRD34CP0C6C1 535 aa17.37■□□□□ 0.37
ITGB1-215ENST00000488494 CDH17Q12864 832 aa17.37■□□□□ 0.37
ITGB1-215ENST00000488494 PLCL1Q15111 1095 aa17.37■□□□□ 0.37
ITGB1-215ENST00000488494 GPR33Q49SQ1 333 aa17.37■□□□□ 0.37
ITGB1-215ENST00000488494 DCAF12Q5T6F0 453 aa17.37■□□□□ 0.37
ITGB1-215ENST00000488494 METRNLQ641Q3 311 aa17.37■□□□□ 0.37
ITGB1-215ENST00000488494 TAS2R42Q7RTR8 314 aa17.37■□□□□ 0.37
ITGB1-215ENST00000488494 SERPINA9Q86WD7 417 aa17.37■□□□□ 0.37
ITGB1-215ENST00000488494 DTX1Q86Y01 620 aa17.37■□□□□ 0.37
ITGB1-215ENST00000488494 LILRA3Q8N6C8 439 aaPredicted RBP17.37■□□□□ 0.37
ITGB1-215ENST00000488494 SPDYE1Q8NFV5 336 aaPredicted RBP17.37■□□□□ 0.37
ITGB1-215ENST00000488494 HM13Q8TCT9 377 aa17.37■□□□□ 0.37
ITGB1-215ENST00000488494 STYXQ8WUJ0 223 aa17.37■□□□□ 0.37
ITGB1-215ENST00000488494 SNRNP27Q8WVK2 155 aaKnown RBP17.37■□□□□ 0.37
ITGB1-215ENST00000488494 C9orf72Q96LT7 481 aa17.37■□□□□ 0.37
ITGB1-215ENST00000488494 RMDN2Q96LZ7 410 aa17.37■□□□□ 0.37
ITGB1-215ENST00000488494 C12orf66Q96MD2 445 aa17.37■□□□□ 0.37
ITGB1-215ENST00000488494 CTRCQ99895 268 aa17.37■□□□□ 0.37
ITGB1-215ENST00000488494 TLR10Q9BXR5 811 aa17.37■□□□□ 0.37
ITGB1-215ENST00000488494 ZDHHC3Q9NYG2 299 aa17.37■□□□□ 0.37
ITGB1-215ENST00000488494 PCDHB11Q9Y5F2 797 aa17.37■□□□□ 0.37
ITGB1-215ENST00000488494 SDK2Q58EX2 2172 aa17.36■□□□□ 0.37
ITGB1-215ENST00000488494 IGLV3-16A0A075B6K0 115 aa17.36■□□□□ 0.37
ITGB1-215ENST00000488494 RASSF9O75901 435 aa17.36■□□□□ 0.37
ITGB1-215ENST00000488494 SUN1O94901 812 aa17.36■□□□□ 0.37
ITGB1-215ENST00000488494 GAS8O95995 478 aa17.36■□□□□ 0.37
ITGB1-215ENST00000488494 APRTP07741 180 aa17.36■□□□□ 0.37
ITGB1-215ENST00000488494 ZSCAN5DPP0CG00 497 aa17.36■□□□□ 0.37
ITGB1-215ENST00000488494 ATP1B2P14415 290 aaPredicted RBP17.36■□□□□ 0.37
ITGB1-215ENST00000488494 PPP1CAP62136 330 aa17.36■□□□□ 0.37
ITGB1-215ENST00000488494 CACNG1Q06432 222 aa17.36■□□□□ 0.37
ITGB1-215ENST00000488494 SEMA5AQ13591 1074 aa17.36■□□□□ 0.37
ITGB1-215ENST00000488494 DBN1Q16643 649 aa17.36■□□□□ 0.37
ITGB1-215ENST00000488494 MANEAQ5SRI9 462 aa17.36■□□□□ 0.37
ITGB1-215ENST00000488494 KIAA1614Q5VZ46 1190 aa17.36■□□□□ 0.37
ITGB1-215ENST00000488494 IRGCQ6NXR0 463 aa17.36■□□□□ 0.37
ITGB1-215ENST00000488494 PIANPQ8IYJ0 282 aa17.36■□□□□ 0.37
ITGB1-215ENST00000488494 HEXDCQ8WVB3 486 aa17.36■□□□□ 0.37
ITGB1-215ENST00000488494 LINC00615Q96LM1 132 aaPredicted RBP17.36■□□□□ 0.37
ITGB1-215ENST00000488494 ASPSCR1Q9BZE9 553 aa17.36■□□□□ 0.37
ITGB1-215ENST00000488494 SIDT1Q9NXL6 827 aaKnown RBP17.36■□□□□ 0.37
ITGB1-215ENST00000488494 PAK5Q9P286 719 aa17.36■□□□□ 0.37
ITGB1-215ENST00000488494 CFAP46Q8IYW2 2715 aa17.36■□□□□ 0.37
ITGB1-215ENST00000488494 OR51F1A6NGY5 319 aa17.35■□□□□ 0.37
ITGB1-215ENST00000488494 EIF4E1BA6NMX2 242 aaKnown RBP17.35■□□□□ 0.37
ITGB1-215ENST00000488494 ERVH48-1M5A8F1 160 aa17.35■□□□□ 0.37
ITGB1-215ENST00000488494 EFSO43281 561 aa17.35■□□□□ 0.37
ITGB1-215ENST00000488494 KIF1CO43896 1103 aaKnown RBP17.35■□□□□ 0.37
ITGB1-215ENST00000488494 CEP104O60308 925 aa17.35■□□□□ 0.37
ITGB1-215ENST00000488494 POLBP06746 335 aa17.35■□□□□ 0.37
ITGB1-215ENST00000488494 MSNP26038 577 aaKnown RBP17.35■□□□□ 0.37
ITGB1-215ENST00000488494 CXCR5P32302 372 aa17.35■□□□□ 0.37
ITGB1-215ENST00000488494 GRIA1P42261 906 aa17.35■□□□□ 0.37
ITGB1-215ENST00000488494 SEPHS1P49903 392 aa17.35■□□□□ 0.37
ITGB1-215ENST00000488494 ATP1A2P50993 1020 aa17.35■□□□□ 0.37
ITGB1-215ENST00000488494 MC2RQ01718 297 aa17.35■□□□□ 0.37
ITGB1-215ENST00000488494 RHDQ02161 417 aa17.35■□□□□ 0.37
ITGB1-215ENST00000488494 CCNG2Q16589 344 aa17.35■□□□□ 0.37
ITGB1-215ENST00000488494 FAM92BQ6ZTR7 304 aa17.35■□□□□ 0.37
ITGB1-215ENST00000488494 PRSS42Q7Z5A4 293 aa17.35■□□□□ 0.37
ITGB1-215ENST00000488494 CDKN2AIPNLQ96HQ2 116 aa17.35■□□□□ 0.37
ITGB1-215ENST00000488494 TEFMQ96QE5 360 aaKnown RBP17.35■□□□□ 0.37
ITGB1-215ENST00000488494 INSM2Q96T92 566 aaPredicted RBP17.35■□□□□ 0.37
ITGB1-215ENST00000488494 ZNF768Q9H5H4 540 aaKnown RBP17.35■□□□□ 0.37
ITGB1-215ENST00000488494 APMAPQ9HDC9 416 aa17.35■□□□□ 0.37
ITGB1-215ENST00000488494 ACSL5Q9ULC5 683 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms