RNA–Protein interactions for RNA: ENST00000488087.1

ECHDC1-217, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 3

Gene ECHDC1, Length 473 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-217ENST00000488087 DDOQ99489 341 aa3.75□□□□□ -1.81
ECHDC1-217ENST00000488087 SLF1Q9BQI6 1058 aa3.75□□□□□ -1.81
ECHDC1-217ENST00000488087 NEURL2Q9BR09 285 aa3.75□□□□□ -1.81
ECHDC1-217ENST00000488087 EBF2Q9HAK2 575 aa3.75□□□□□ -1.81
ECHDC1-217ENST00000488087 ARHGEF38Q9NXL2 777 aa3.75□□□□□ -1.81
ECHDC1-217ENST00000488087 SEC63Q9UGP8 760 aaKnown RBP3.75□□□□□ -1.81
ECHDC1-217ENST00000488087 RALYQ9UKM9 306 aaKnown RBP3.75□□□□□ -1.81
ECHDC1-217ENST00000488087 SEC23IPQ9Y6Y8 1000 aaKnown RBP3.75□□□□□ -1.81
ECHDC1-217ENST00000488087 FMN1Q68DA7 1419 aa3.75□□□□□ -1.81
ECHDC1-217ENST00000488087 MTUS2Q5JR59 1369 aa3.75□□□□□ -1.81
ECHDC1-217ENST00000488087 ANKRD30AQ9BXX3 1397 aa3.75□□□□□ -1.81
ECHDC1-217ENST00000488087 KIF15Q9NS87 1388 aa3.75□□□□□ -1.81
ECHDC1-217ENST00000488087 KIF7Q2M1P5 1343 aa3.74□□□□□ -1.81
ECHDC1-217ENST00000488087 KIF16BQ96L93 1317 aa3.74□□□□□ -1.81
ECHDC1-217ENST00000488087 GAPVD1Q14C86 1478 aa3.74□□□□□ -1.81
ECHDC1-217ENST00000488087 ARHGAP35Q9NRY4 1499 aa3.74□□□□□ -1.81
ECHDC1-217ENST00000488087 OR5K3A6NET4 321 aa3.74□□□□□ -1.81
ECHDC1-217ENST00000488087 GLOD5A6NK44 160 aa3.74□□□□□ -1.81
ECHDC1-217ENST00000488087 A8MV72 311 aaPredicted RBP3.74□□□□□ -1.81
ECHDC1-217ENST00000488087 RTEL1-TNFRSF6BF6WH68 1400 aa3.74□□□□□ -1.81
ECHDC1-217ENST00000488087 TMEM178BH3BS89 294 aa3.74□□□□□ -1.81
ECHDC1-217ENST00000488087 BUB3O43684 328 aa3.74□□□□□ -1.81
ECHDC1-217ENST00000488087 WDR1O75083 606 aa3.74□□□□□ -1.81
ECHDC1-217ENST00000488087 REC8O95072 547 aa3.74□□□□□ -1.81
ECHDC1-217ENST00000488087 CCDC172P0C7W6 258 aa3.74□□□□□ -1.81
ECHDC1-217ENST00000488087 FAM106CPP0CH98 169 aa3.74□□□□□ -1.81
ECHDC1-217ENST00000488087 DGKAP23743 735 aa3.74□□□□□ -1.81
ECHDC1-217ENST00000488087 HRH2P25021 359 aa3.74□□□□□ -1.81
ECHDC1-217ENST00000488087 KRT20P35900 424 aa3.74□□□□□ -1.81
ECHDC1-217ENST00000488087 PNLIPRP2P54317 469 aa3.74□□□□□ -1.81
ECHDC1-217ENST00000488087 ERVFC1-1P60608 527 aa3.74□□□□□ -1.81
ECHDC1-217ENST00000488087 RPL36AP83881 106 aaKnown RBP3.74□□□□□ -1.81
ECHDC1-217ENST00000488087 POU3F1Q03052 451 aaPredicted RBP3.74□□□□□ -1.81
ECHDC1-217ENST00000488087 PRDM2Q13029 1718 aa3.74□□□□□ -1.81
ECHDC1-217ENST00000488087 DLG2Q15700 870 aa3.74□□□□□ -1.81
ECHDC1-217ENST00000488087 SYT16Q17RD7 645 aa3.74□□□□□ -1.81
ECHDC1-217ENST00000488087 NAA16Q6N069 864 aaPredicted RBP3.74□□□□□ -1.81
ECHDC1-217ENST00000488087 ASB18Q6ZVZ8 466 aa3.74□□□□□ -1.81
ECHDC1-217ENST00000488087 SLC9B2Q86UD5 537 aa3.74□□□□□ -1.81
ECHDC1-217ENST00000488087 NAGSQ8N159 534 aa3.74□□□□□ -1.81
ECHDC1-217ENST00000488087 NKAIN3Q8N8D7 197 aa3.74□□□□□ -1.81
ECHDC1-217ENST00000488087 MAB21L3Q8N8X9 362 aa3.74□□□□□ -1.81
ECHDC1-217ENST00000488087 IL17RCQ8NAC3 791 aa3.74□□□□□ -1.81
ECHDC1-217ENST00000488087 LNX1Q8TBB1 728 aaPredicted RBP3.74□□□□□ -1.81
ECHDC1-217ENST00000488087 PIBF1Q8WXW3 757 aa3.74□□□□□ -1.81
ECHDC1-217ENST00000488087 CD101Q93033 1021 aa3.74□□□□□ -1.81
ECHDC1-217ENST00000488087 LMLNQ96KR4 655 aa3.74□□□□□ -1.81
ECHDC1-217ENST00000488087 CEP295NLQ96MC4 621 aa3.74□□□□□ -1.81
ECHDC1-217ENST00000488087 EVA1AQ9H8M9 152 aa3.74□□□□□ -1.81
ECHDC1-217ENST00000488087 MED4Q9NPJ6 270 aa3.74□□□□□ -1.81
ECHDC1-217ENST00000488087 SLC35C2Q9NQQ7 365 aa3.74□□□□□ -1.81
ECHDC1-217ENST00000488087 DONSONQ9NYP3 566 aa3.74□□□□□ -1.81
ECHDC1-217ENST00000488087 MARCH4Q9P2E8 410 aaPredicted RBP3.74□□□□□ -1.81
ECHDC1-217ENST00000488087 CPSF2Q9P2I0 782 aaKnown RBP3.74□□□□□ -1.81
ECHDC1-217ENST00000488087 PTRH2Q9Y3E5 179 aaKnown RBP3.74□□□□□ -1.81
ECHDC1-217ENST00000488087 PCDHGA5Q9Y5G8 931 aa3.74□□□□□ -1.81
ECHDC1-217ENST00000488087 DOCK7Q96N67 2140 aa3.74□□□□□ -1.81
ECHDC1-217ENST00000488087 AQRO60306 1485 aaKnown RBP eCLIP3.73□□□□□ -1.81
ECHDC1-217ENST00000488087 A0A1W2PRQ8 180 aa3.73□□□□□ -1.81
ECHDC1-217ENST00000488087 OR2A25A4D2G3 310 aa3.73□□□□□ -1.81
ECHDC1-217ENST00000488087 ASPDHA6ND91 283 aa3.73□□□□□ -1.81
ECHDC1-217ENST00000488087 TMEM8BA6NDV4 472 aa3.73□□□□□ -1.81
ECHDC1-217ENST00000488087 TMEM189-UBE2V1I3L0A0 370 aa3.73□□□□□ -1.81
ECHDC1-217ENST00000488087 J3QR06 171 aa3.73□□□□□ -1.81
ECHDC1-217ENST00000488087 P4HA2O15460 535 aa3.73□□□□□ -1.81
ECHDC1-217ENST00000488087 LDB3O75112 727 aa3.73□□□□□ -1.81
ECHDC1-217ENST00000488087 ENTPD3O75355 529 aa3.73□□□□□ -1.81
ECHDC1-217ENST00000488087 ZNF217O75362 1048 aa3.73□□□□□ -1.81
ECHDC1-217ENST00000488087 ERAL1O75616 437 aaKnown RBP3.73□□□□□ -1.81
ECHDC1-217ENST00000488087 RSL1D1O76021 490 aaKnown RBP3.73□□□□□ -1.81
ECHDC1-217ENST00000488087 PGM3O95394 542 aa3.73□□□□□ -1.81
ECHDC1-217ENST00000488087 TPM3P06753 285 aa3.73□□□□□ -1.81
ECHDC1-217ENST00000488087 TUBBP07437 444 aa3.73□□□□□ -1.81
ECHDC1-217ENST00000488087 VDRP11473 427 aa3.73□□□□□ -1.81
ECHDC1-217ENST00000488087 HOXB6P17509 224 aaKnown RBP3.73□□□□□ -1.81
ECHDC1-217ENST00000488087 IL11P20809 199 aa3.73□□□□□ -1.81
ECHDC1-217ENST00000488087 KCNA5P22460 613 aa3.73□□□□□ -1.81
ECHDC1-217ENST00000488087 CALRP27797 417 aaKnown RBP3.73□□□□□ -1.81
ECHDC1-217ENST00000488087 FMO5P49326 533 aa3.73□□□□□ -1.81
ECHDC1-217ENST00000488087 FUT6P51993 359 aa3.73□□□□□ -1.81
ECHDC1-217ENST00000488087 STAT2P52630 851 aa3.73□□□□□ -1.81
ECHDC1-217ENST00000488087 ZNF132P52740 706 aa3.73□□□□□ -1.81
ECHDC1-217ENST00000488087 CTSCP53634 463 aa3.73□□□□□ -1.81
ECHDC1-217ENST00000488087 IFI35P80217 286 aaPredicted RBP3.73□□□□□ -1.81
ECHDC1-217ENST00000488087 TMF1P82094 1093 aa3.73□□□□□ -1.81
ECHDC1-217ENST00000488087 TROAPQ12815 778 aa3.73□□□□□ -1.81
ECHDC1-217ENST00000488087 TRDNQ13061 729 aa3.73□□□□□ -1.81
ECHDC1-217ENST00000488087 UBE2V1Q13404 147 aa3.73□□□□□ -1.81
ECHDC1-217ENST00000488087 MVPQ14764 893 aaKnown RBP3.73□□□□□ -1.81
ECHDC1-217ENST00000488087 PCLAFQ15004 111 aa3.73□□□□□ -1.81
ECHDC1-217ENST00000488087 LCE1AQ5T7P2 110 aa3.73□□□□□ -1.81
ECHDC1-217ENST00000488087 KRT79Q5XKE5 535 aa3.73□□□□□ -1.81
ECHDC1-217ENST00000488087 SLC30A6Q6NXT4 461 aa3.73□□□□□ -1.81
ECHDC1-217ENST00000488087 FAM171BQ6P995 826 aa3.73□□□□□ -1.81
ECHDC1-217ENST00000488087 TPRG1Q6ZUI0 275 aa3.73□□□□□ -1.81
ECHDC1-217ENST00000488087 PLEKHM3Q6ZWE6 761 aa3.73□□□□□ -1.81
ECHDC1-217ENST00000488087 ANKRD23Q86SG2 305 aa3.73□□□□□ -1.81
ECHDC1-217ENST00000488087 NR2C2APQ86WQ0 139 aa3.73□□□□□ -1.81
ECHDC1-217ENST00000488087 DNAAF5Q86Y56 855 aa3.73□□□□□ -1.81
ECHDC1-217ENST00000488087 DCP1BQ8IZD4 617 aaKnown RBP3.73□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms