RNA–Protein interactions for RNA: ENST00000488017.1

SMC4-220, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 4

Gene SMC4, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-220ENST00000488017 EIF4EBP2Q13542 120 aaPredicted RBP2.59□□□□□ -1.99
SMC4-220ENST00000488017 DCTN2Q13561 401 aaKnown RBP2.59□□□□□ -1.99
SMC4-220ENST00000488017 TDGQ13569 410 aa2.59□□□□□ -1.99
SMC4-220ENST00000488017 ALG11Q2TAA5 492 aa2.59□□□□□ -1.99
SMC4-220ENST00000488017 FIP1L1Q6UN15 594 aaKnown RBP2.59□□□□□ -1.99
SMC4-220ENST00000488017 PP632Q6XCG6 107 aa2.59□□□□□ -1.99
SMC4-220ENST00000488017 HACE1Q8IYU2 909 aa2.59□□□□□ -1.99
SMC4-220ENST00000488017 CCT6BQ92526 530 aa2.59□□□□□ -1.99
SMC4-220ENST00000488017 LINC00167Q96N53 147 aa2.59□□□□□ -1.99
SMC4-220ENST00000488017 GAL3ST4Q96RP7 486 aa2.59□□□□□ -1.99
SMC4-220ENST00000488017 PUS3Q9BZE2 481 aaKnown RBP2.59□□□□□ -1.99
SMC4-220ENST00000488017 SLC28A3Q9HAS3 691 aa2.59□□□□□ -1.99
SMC4-220ENST00000488017 BRF2Q9HAW0 419 aa2.59□□□□□ -1.99
SMC4-220ENST00000488017 PPP1R14DQ9NXH3 145 aa2.59□□□□□ -1.99
SMC4-220ENST00000488017 MUTYHQ9UIF7 546 aa2.59□□□□□ -1.99
SMC4-220ENST00000488017 EXO1Q9UQ84 846 aaKnown RBP2.59□□□□□ -1.99
SMC4-220ENST00000488017 RIPOR2Q9Y4F9 1068 aa2.59□□□□□ -1.99
SMC4-220ENST00000488017 ATP6V0E1O15342 81 aa2.58□□□□□ -2
SMC4-220ENST00000488017 IDH3BO43837 385 aa2.58□□□□□ -2
SMC4-220ENST00000488017 CLDN1O95832 211 aa2.58□□□□□ -2
SMC4-220ENST00000488017 NKX2-1P43699 371 aaPredicted RBP2.58□□□□□ -2
SMC4-220ENST00000488017 ARL4CP56559 192 aa2.58□□□□□ -2
SMC4-220ENST00000488017 FASTKD3Q14CZ7 662 aaKnown RBP2.58□□□□□ -2
SMC4-220ENST00000488017 FBXO47Q5MNV8 452 aa2.58□□□□□ -2
SMC4-220ENST00000488017 NAA35Q5VZE5 725 aa2.58□□□□□ -2
SMC4-220ENST00000488017 ANO1Q5XXA6 986 aa2.58□□□□□ -2
SMC4-220ENST00000488017 NSUN5P2Q63ZY6 315 aa2.58□□□□□ -2
SMC4-220ENST00000488017 OR14L1PQ8NHC6 308 aa2.58□□□□□ -2
SMC4-220ENST00000488017 DYRK2Q92630 601 aa2.58□□□□□ -2
SMC4-220ENST00000488017 SEMA4DQ92854 862 aa2.58□□□□□ -2
SMC4-220ENST00000488017 SLCO2A1Q92959 643 aa2.58□□□□□ -2
SMC4-220ENST00000488017 TMEM68Q96MH6 324 aa2.58□□□□□ -2
SMC4-220ENST00000488017 SMC6Q96SB8 1091 aa2.58□□□□□ -2
SMC4-220ENST00000488017 TMEM39BQ9GZU3 492 aa2.58□□□□□ -2
SMC4-220ENST00000488017 HSF4Q9ULV5 492 aa2.58□□□□□ -2
SMC4-220ENST00000488017 COMMD10Q9Y6G5 202 aa2.58□□□□□ -2
SMC4-220ENST00000488017 TRIOBPQ9H2D6 2365 aa2.58□□□□□ -2
SMC4-220ENST00000488017 FAM237AA0A1B0GTK4 181 aa2.57□□□□□ -2
SMC4-220ENST00000488017 KANSL1LA0AUZ9 987 aa2.57□□□□□ -2
SMC4-220ENST00000488017 DNM1LO00429 736 aa2.57□□□□□ -2
SMC4-220ENST00000488017 LDLRAD4O15165 306 aa2.57□□□□□ -2
SMC4-220ENST00000488017 C22orf31O95567 290 aa2.57□□□□□ -2
SMC4-220ENST00000488017 CKMT2P17540 419 aa2.57□□□□□ -2
SMC4-220ENST00000488017 TRAPPC10P48553 1259 aa2.57□□□□□ -2
SMC4-220ENST00000488017 CDH11P55287 796 aa2.57□□□□□ -2
SMC4-220ENST00000488017 KHDRBS1Q07666 443 aaKnown RBP eCLIP2.57□□□□□ -2
SMC4-220ENST00000488017 TAF5Q15542 800 aa2.57□□□□□ -2
SMC4-220ENST00000488017 GSTA3Q16772 222 aa2.57□□□□□ -2
SMC4-220ENST00000488017 SLC9B1Q4ZJI4 515 aa2.57□□□□□ -2
SMC4-220ENST00000488017 MARVELD2Q8N4S9 558 aa2.57□□□□□ -2
SMC4-220ENST00000488017 SPATA5Q8NB90 893 aa2.57□□□□□ -2
SMC4-220ENST00000488017 OR5AP2Q8NGF4 316 aa2.57□□□□□ -2
SMC4-220ENST00000488017 ARSGQ96EG1 525 aa2.57□□□□□ -2
SMC4-220ENST00000488017 OLFML3Q9NRN5 406 aa2.57□□□□□ -2
SMC4-220ENST00000488017 TAB2Q9NYJ8 693 aa2.57□□□□□ -2
SMC4-220ENST00000488017 THEGQ9P2T0 379 aa2.57□□□□□ -2
SMC4-220ENST00000488017 HAO1Q9UJM8 370 aa2.57□□□□□ -2
SMC4-220ENST00000488017 GJD2Q9UKL4 321 aa2.57□□□□□ -2
SMC4-220ENST00000488017 MSGN1A6NI15 193 aa2.56□□□□□ -2
SMC4-220ENST00000488017 SRRM5B3KS81 715 aa2.56□□□□□ -2
SMC4-220ENST00000488017 JRKO75564 520 aa2.56□□□□□ -2
SMC4-220ENST00000488017 SEC31AO94979 1220 aaKnown RBP2.56□□□□□ -2
SMC4-220ENST00000488017 LGALS3BPQ08380 585 aa2.56□□□□□ -2
SMC4-220ENST00000488017 CDC16Q13042 620 aa2.56□□□□□ -2
SMC4-220ENST00000488017 OLIG2Q13516 323 aa2.56□□□□□ -2
SMC4-220ENST00000488017 CAMK1Q14012 370 aa2.56□□□□□ -2
SMC4-220ENST00000488017 ZNF805Q5CZA5 627 aa2.56□□□□□ -2
SMC4-220ENST00000488017 C10orf62Q5T681 223 aaPredicted RBP2.56□□□□□ -2
SMC4-220ENST00000488017 KHDRBS2Q5VWX1 349 aaKnown RBP2.56□□□□□ -2
SMC4-220ENST00000488017 KCNMB4Q86W47 210 aa2.56□□□□□ -2
SMC4-220ENST00000488017 NKAPQ8N5F7 415 aaKnown RBP2.56□□□□□ -2
SMC4-220ENST00000488017 L3MBTL4Q8NA19 623 aa2.56□□□□□ -2
SMC4-220ENST00000488017 HM13Q8TCT9 377 aa2.56□□□□□ -2
SMC4-220ENST00000488017 PYM1Q9BRP8 204 aaKnown RBP2.56□□□□□ -2
SMC4-220ENST00000488017 ISCA1Q9BUE6 129 aa2.56□□□□□ -2
SMC4-220ENST00000488017 KIF9Q9HAQ2 790 aa2.56□□□□□ -2
SMC4-220ENST00000488017 ANAPC11Q9NYG5 84 aa2.56□□□□□ -2
SMC4-220ENST00000488017 RCC2Q9P258 522 aaKnown RBP2.56□□□□□ -2
SMC4-220ENST00000488017 COPG2Q9UBF2 871 aa2.56□□□□□ -2
SMC4-220ENST00000488017 WDR37Q9Y2I8 494 aa2.56□□□□□ -2
SMC4-220ENST00000488017 LAS1LQ9Y4W2 734 aaKnown RBP2.56□□□□□ -2
SMC4-220ENST00000488017 A0A1W2PQM1 296 aa2.55□□□□□ -2
SMC4-220ENST00000488017 CPOXP36551 454 aa2.55□□□□□ -2
SMC4-220ENST00000488017 ARL1P40616 181 aaPredicted RBP2.55□□□□□ -2
SMC4-220ENST00000488017 PIK3CAP42336 1068 aa2.55□□□□□ -2
SMC4-220ENST00000488017 CALCOCO2Q13137 446 aa2.55□□□□□ -2
SMC4-220ENST00000488017 BIRC2Q13490 618 aa2.55□□□□□ -2
SMC4-220ENST00000488017 LY6DQ14210 128 aa2.55□□□□□ -2
SMC4-220ENST00000488017 E2F5Q15329 346 aa2.55□□□□□ -2
SMC4-220ENST00000488017 DNAJC22Q8N4W6 341 aa2.55□□□□□ -2
SMC4-220ENST00000488017 Q8NBF4 154 aa2.55□□□□□ -2
SMC4-220ENST00000488017 TBC1D20Q96BZ9 403 aa2.55□□□□□ -2
SMC4-220ENST00000488017 PRICKLE1Q96MT3 831 aaPredicted RBP2.55□□□□□ -2
SMC4-220ENST00000488017 RPS6KC1Q96S38 1066 aa2.55□□□□□ -2
SMC4-220ENST00000488017 FUZQ9BT04 418 aa2.55□□□□□ -2
SMC4-220ENST00000488017 DGCR6LQ9BY27 220 aa2.55□□□□□ -2
SMC4-220ENST00000488017 RANBP17Q9H2T7 1088 aaKnown RBP2.55□□□□□ -2
SMC4-220ENST00000488017 PRKRIP1Q9H875 184 aaPredicted RBP2.55□□□□□ -2
SMC4-220ENST00000488017 FBXL17Q9UF56 701 aa2.55□□□□□ -2
SMC4-220ENST00000488017 MAU2Q9Y6X3 613 aa2.55□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms