RNA–Protein interactions for RNA: ENST00000487739.1

CCDC66-221, Transcript of coiled-coil domain containing 66, humanhuman

TSL 3

Gene CCDC66, Length 443 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-221ENST00000487739 IGHV4-61A0A0C4DH41 118 aa3.48□□□□□ -1.85
CCDC66-221ENST00000487739 TMCC2O75069 709 aa3.48□□□□□ -1.85
CCDC66-221ENST00000487739 AP2A2O94973 939 aa3.48□□□□□ -1.85
CCDC66-221ENST00000487739 GCNT3O95395 438 aa3.48□□□□□ -1.85
CCDC66-221ENST00000487739 IGHV4-59P01825 116 aa3.48□□□□□ -1.85
CCDC66-221ENST00000487739 RAF1P04049 648 aa3.48□□□□□ -1.85
CCDC66-221ENST00000487739 SPARCP09486 303 aa3.48□□□□□ -1.85
CCDC66-221ENST00000487739 GATA1P15976 413 aaPredicted RBP3.48□□□□□ -1.85
CCDC66-221ENST00000487739 CEBPBP17676 345 aa3.48□□□□□ -1.85
CCDC66-221ENST00000487739 PBX3P40426 434 aa3.48□□□□□ -1.85
CCDC66-221ENST00000487739 PIK3CAP42336 1068 aa3.48□□□□□ -1.85
CCDC66-221ENST00000487739 SNX16P57768 344 aa3.48□□□□□ -1.85
CCDC66-221ENST00000487739 ZDHHC20Q5W0Z9 365 aa3.48□□□□□ -1.85
CCDC66-221ENST00000487739 ACAD10Q6JQN1 1059 aa3.48□□□□□ -1.85
CCDC66-221ENST00000487739 Q6ZSR9 355 aa3.48□□□□□ -1.85
CCDC66-221ENST00000487739 TPRG1Q6ZUI0 275 aa3.48□□□□□ -1.85
CCDC66-221ENST00000487739 TSPAN33Q86UF1 283 aa3.48□□□□□ -1.85
CCDC66-221ENST00000487739 HEATR4Q86WZ0 1026 aa3.48□□□□□ -1.85
CCDC66-221ENST00000487739 ZNF354CQ86Y25 554 aa3.48□□□□□ -1.85
CCDC66-221ENST00000487739 TSPYL6Q8N831 410 aa3.48□□□□□ -1.85
CCDC66-221ENST00000487739 AMER3Q8N944 861 aa3.48□□□□□ -1.85
CCDC66-221ENST00000487739 L3MBTL4Q8NA19 623 aa3.48□□□□□ -1.85
CCDC66-221ENST00000487739 GSDMBQ8TAX9 411 aa3.48□□□□□ -1.85
CCDC66-221ENST00000487739 TRPC4APQ8TEL6 797 aa3.48□□□□□ -1.85
CCDC66-221ENST00000487739 ZUFSPQ96AP4 578 aa3.48□□□□□ -1.85
CCDC66-221ENST00000487739 FGFBP2Q9BYJ0 223 aa3.48□□□□□ -1.85
CCDC66-221ENST00000487739 CCDC177Q9NQR7 707 aaPredicted RBP3.48□□□□□ -1.85
CCDC66-221ENST00000487739 OLFML3Q9NRN5 406 aa3.48□□□□□ -1.85
CCDC66-221ENST00000487739 LUZP4Q9P127 313 aa3.48□□□□□ -1.85
CCDC66-221ENST00000487739 DBNLQ9UJU6 430 aaKnown RBP3.48□□□□□ -1.85
CCDC66-221ENST00000487739 SLC7A7Q9UM01 511 aa3.48□□□□□ -1.85
CCDC66-221ENST00000487739 TMEM189-UBE2V1I3L0A0 370 aa3.47□□□□□ -1.85
CCDC66-221ENST00000487739 J3QR06 171 aa3.47□□□□□ -1.85
CCDC66-221ENST00000487739 HIST1H2ABP04908 130 aa3.47□□□□□ -1.85
CCDC66-221ENST00000487739 PYGLP06737 847 aa3.47□□□□□ -1.85
CCDC66-221ENST00000487739 H1F0P07305 194 aaKnown RBP3.47□□□□□ -1.85
CCDC66-221ENST00000487739 TRIM49P0CI25 452 aa3.47□□□□□ -1.85
CCDC66-221ENST00000487739 TRIM49CP0CI26 452 aa3.47□□□□□ -1.85
CCDC66-221ENST00000487739 SELLP14151 372 aa3.47□□□□□ -1.85
CCDC66-221ENST00000487739 HIST1H2ADP20671 130 aa3.47□□□□□ -1.85
CCDC66-221ENST00000487739 CBLP22681 906 aa3.47□□□□□ -1.85
CCDC66-221ENST00000487739 BSGP35613 385 aa3.47□□□□□ -1.85
CCDC66-221ENST00000487739 TUBP50607 506 aa3.47□□□□□ -1.85
CCDC66-221ENST00000487739 RPS18P62269 152 aaKnown RBP3.47□□□□□ -1.85
CCDC66-221ENST00000487739 UBE2V1Q13404 147 aa3.47□□□□□ -1.85
CCDC66-221ENST00000487739 RRS1Q15050 365 aaKnown RBP3.47□□□□□ -1.85
CCDC66-221ENST00000487739 MEP1AQ16819 746 aa3.47□□□□□ -1.85
CCDC66-221ENST00000487739 DENND5BQ6ZUT9 1274 aa3.47□□□□□ -1.85
CCDC66-221ENST00000487739 ZNF534Q76KX8 674 aa3.47□□□□□ -1.85
CCDC66-221ENST00000487739 HIST3H2AQ7L7L0 130 aa3.47□□□□□ -1.85
CCDC66-221ENST00000487739 SLC16A9Q7RTY1 509 aa3.47□□□□□ -1.85
CCDC66-221ENST00000487739 NUDCD1Q96RS6 583 aa3.47□□□□□ -1.85
CCDC66-221ENST00000487739 SYT15Q9BQS2 421 aa3.47□□□□□ -1.85
CCDC66-221ENST00000487739 DENND2DQ9H6A0 471 aaPredicted RBP3.47□□□□□ -1.85
CCDC66-221ENST00000487739 PELI2Q9HAT8 420 aa3.47□□□□□ -1.85
CCDC66-221ENST00000487739 MIOSQ9NXC5 875 aa3.47□□□□□ -1.85
CCDC66-221ENST00000487739 TRMT1Q9NXH9 659 aaKnown RBP3.47□□□□□ -1.85
CCDC66-221ENST00000487739 SAGE1Q9NXZ1 904 aa3.47□□□□□ -1.85
CCDC66-221ENST00000487739 ASIC3Q9UHC3 531 aa3.47□□□□□ -1.85
CCDC66-221ENST00000487739 A0A1W2PPH5 198 aa3.46□□□□□ -1.86
CCDC66-221ENST00000487739 ZNF197O14709 1029 aa3.46□□□□□ -1.86
CCDC66-221ENST00000487739 FRMD6-AS1P0C7T7 363 aa3.46□□□□□ -1.86
CCDC66-221ENST00000487739 MSH2P43246 934 aa3.46□□□□□ -1.86
CCDC66-221ENST00000487739 CDH11P55287 796 aa3.46□□□□□ -1.86
CCDC66-221ENST00000487739 NIPAL4Q0D2K0 466 aa3.46□□□□□ -1.86
CCDC66-221ENST00000487739 GAGE2BQ13066 116 aa3.46□□□□□ -1.86
CCDC66-221ENST00000487739 TEAD2Q15562 447 aa3.46□□□□□ -1.86
CCDC66-221ENST00000487739 CTU2Q2VPK5 515 aaKnown RBP3.46□□□□□ -1.86
CCDC66-221ENST00000487739 GAGE2EQ4V326 116 aa3.46□□□□□ -1.86
CCDC66-221ENST00000487739 XKR6Q5GH73 641 aa3.46□□□□□ -1.86
CCDC66-221ENST00000487739 GAGE2AQ6NT46 116 aa3.46□□□□□ -1.86
CCDC66-221ENST00000487739 CYP20A1Q6UW02 462 aa3.46□□□□□ -1.86
CCDC66-221ENST00000487739 ARHGAP12Q8IWW6 846 aa3.46□□□□□ -1.86
CCDC66-221ENST00000487739 CPXCR1Q8N123 301 aa3.46□□□□□ -1.86
CCDC66-221ENST00000487739 CRYBG2Q8N1P7 616 aa3.46□□□□□ -1.86
CCDC66-221ENST00000487739 ZNF843Q8N446 348 aa3.46□□□□□ -1.86
CCDC66-221ENST00000487739 FRMD1Q8N878 549 aa3.46□□□□□ -1.86
CCDC66-221ENST00000487739 ZNF383Q8NA42 475 aa3.46□□□□□ -1.86
CCDC66-221ENST00000487739 TMEM178AQ8NBL3 297 aa3.46□□□□□ -1.86
CCDC66-221ENST00000487739 ETNPPLQ8TBG4 499 aa3.46□□□□□ -1.86
CCDC66-221ENST00000487739 RRP36Q96EU6 259 aaKnown RBP3.46□□□□□ -1.86
CCDC66-221ENST00000487739 ZNF300Q96RE9 604 aaPredicted RBP3.46□□□□□ -1.86
CCDC66-221ENST00000487739 PDCL3Q9H2J4 239 aa3.46□□□□□ -1.86
CCDC66-221ENST00000487739 POLR1BQ9H9Y6 1135 aa3.46□□□□□ -1.86
CCDC66-221ENST00000487739 RRP7BPQ9NSQ0 103 aa3.46□□□□□ -1.86
CCDC66-221ENST00000487739 FLRT3Q9NZU0 649 aa3.46□□□□□ -1.86
CCDC66-221ENST00000487739 GAGE2DQ9UEU5 116 aa3.46□□□□□ -1.86
CCDC66-221ENST00000487739 LIMA1Q9UHB6 759 aaKnown RBP3.46□□□□□ -1.86
CCDC66-221ENST00000487739 ZHX2Q9Y6X8 837 aa3.46□□□□□ -1.86
CCDC66-221ENST00000487739 IGLV9-49A0A0B4J1Y8 123 aa3.45□□□□□ -1.86
CCDC66-221ENST00000487739 DNM1LO00429 736 aa3.45□□□□□ -1.86
CCDC66-221ENST00000487739 OGG1O15527 345 aa3.45□□□□□ -1.86
CCDC66-221ENST00000487739 MOCS3O95396 460 aa3.45□□□□□ -1.86
CCDC66-221ENST00000487739 ACADLP28330 430 aa3.45□□□□□ -1.86
CCDC66-221ENST00000487739 GPR143P51810 404 aa3.45□□□□□ -1.86
CCDC66-221ENST00000487739 SP3Q02447 781 aa3.45□□□□□ -1.86
CCDC66-221ENST00000487739 GPR17Q13304 367 aa3.45□□□□□ -1.86
CCDC66-221ENST00000487739 P2RY6Q15077 328 aa3.45□□□□□ -1.86
CCDC66-221ENST00000487739 SNAI3Q3KNW1 292 aa3.45□□□□□ -1.86
CCDC66-221ENST00000487739 ACSM2BQ68CK6 577 aa3.45□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms