RNA–Protein interactions for RNA: ENST00000487698.5

SF3B1-211, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SF3B1, Length 2,127 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-211ENST00000487698 CTSCP53634 463 aa9.28□□□□□ -0.92
SF3B1-211ENST00000487698 AGERQ15109 404 aa9.28□□□□□ -0.92
SF3B1-211ENST00000487698 PHKG1Q16816 387 aa9.28□□□□□ -0.92
SF3B1-211ENST00000487698 ZNF658BQ4V348 819 aaPredicted RBP9.28□□□□□ -0.92
SF3B1-211ENST00000487698 PLEKHS1Q5SXH7 462 aa9.28□□□□□ -0.92
SF3B1-211ENST00000487698 CACUL1Q86Y37 369 aa9.28□□□□□ -0.92
SF3B1-211ENST00000487698 RASGRP3Q8IV61 690 aa9.28□□□□□ -0.92
SF3B1-211ENST00000487698 KIRREL3Q8IZU9 778 aa9.28□□□□□ -0.92
SF3B1-211ENST00000487698 PRUNE2Q8WUY3 3088 aa9.28□□□□□ -0.92
SF3B1-211ENST00000487698 DLG3Q92796 817 aa9.28□□□□□ -0.92
SF3B1-211ENST00000487698 LRCH3Q96II8 777 aa9.28□□□□□ -0.92
SF3B1-211ENST00000487698 MAELQ96JY0 434 aaKnown RBP9.28□□□□□ -0.92
SF3B1-211ENST00000487698 RILPQ96NA2 401 aa9.28□□□□□ -0.92
SF3B1-211ENST00000487698 EPHX3Q9H6B9 360 aa9.28□□□□□ -0.92
SF3B1-211ENST00000487698 CD274Q9NZQ7 290 aa9.28□□□□□ -0.92
SF3B1-211ENST00000487698 APOBEC2Q9Y235 224 aaKnown RBP9.28□□□□□ -0.92
SF3B1-211ENST00000487698 ASB1Q9Y576 335 aa9.28□□□□□ -0.92
SF3B1-211ENST00000487698 OR2AG2A6NM03 316 aa9.28□□□□□ -0.92
SF3B1-211ENST00000487698 INPP4BO15327 924 aa9.28□□□□□ -0.92
SF3B1-211ENST00000487698 FFAR2O15552 330 aa9.28□□□□□ -0.92
SF3B1-211ENST00000487698 SNX2O60749 519 aa9.28□□□□□ -0.92
SF3B1-211ENST00000487698 CCDC22O60826 627 aa9.28□□□□□ -0.92
SF3B1-211ENST00000487698 LILRB5O75023 590 aa9.28□□□□□ -0.92
SF3B1-211ENST00000487698 GPC4O75487 556 aa9.28□□□□□ -0.92
SF3B1-211ENST00000487698 DNAJC8O75937 253 aaPredicted RBP9.28□□□□□ -0.92
SF3B1-211ENST00000487698 CDK14O94921 469 aa9.28□□□□□ -0.92
SF3B1-211ENST00000487698 KLF8O95600 359 aaPredicted RBP9.28□□□□□ -0.92
SF3B1-211ENST00000487698 MPC1LP0DKB6 136 aa9.28□□□□□ -0.92
SF3B1-211ENST00000487698 HOXB2P14652 356 aa9.28□□□□□ -0.92
SF3B1-211ENST00000487698 GLULP15104 373 aa9.28□□□□□ -0.92
SF3B1-211ENST00000487698 COL9A1P20849 921 aa9.28□□□□□ -0.92
SF3B1-211ENST00000487698 AGTR2P50052 363 aa9.28□□□□□ -0.92
SF3B1-211ENST00000487698 CDH13P55290 713 aa9.28□□□□□ -0.92
SF3B1-211ENST00000487698 SH3BP2P78314 561 aa9.28□□□□□ -0.92
SF3B1-211ENST00000487698 GRSF1Q12849 480 aaKnown RBP eCLIP9.28□□□□□ -0.92
SF3B1-211ENST00000487698 TMEM115Q12893 351 aaPredicted RBP9.28□□□□□ -0.92
SF3B1-211ENST00000487698 LCP2Q13094 533 aa9.28□□□□□ -0.92
SF3B1-211ENST00000487698 STARD3Q14849 445 aa9.28□□□□□ -0.92
SF3B1-211ENST00000487698 KRT72Q14CN4 511 aa9.28□□□□□ -0.92
SF3B1-211ENST00000487698 PCBP2Q15366 365 aaKnown RBP eCLIP9.28□□□□□ -0.92
SF3B1-211ENST00000487698 SMAD2Q15796 467 aaKnown RBP9.28□□□□□ -0.92
SF3B1-211ENST00000487698 ANKS6Q68DC2 871 aa9.28□□□□□ -0.92
SF3B1-211ENST00000487698 RAET1GQ6H3X3 334 aa9.28□□□□□ -0.92
SF3B1-211ENST00000487698 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP9.28□□□□□ -0.92
SF3B1-211ENST00000487698 NEK10Q6ZWH5 1172 aa9.28□□□□□ -0.92
SF3B1-211ENST00000487698 FRA10AC1Q70Z53 315 aa9.28□□□□□ -0.92
SF3B1-211ENST00000487698 TRMT11Q7Z4G4 463 aaKnown RBP9.28□□□□□ -0.92
SF3B1-211ENST00000487698 VRK3Q8IV63 474 aa9.28□□□□□ -0.92
SF3B1-211ENST00000487698 BEND7Q8N7W2 519 aaPredicted RBP9.28□□□□□ -0.92
SF3B1-211ENST00000487698 UBTD2Q8WUN7 234 aa9.28□□□□□ -0.92
SF3B1-211ENST00000487698 FAR2Q96K12 515 aa9.28□□□□□ -0.92
SF3B1-211ENST00000487698 OR52B2Q96RD2 323 aa9.28□□□□□ -0.92
SF3B1-211ENST00000487698 CCDC106Q9BWC9 280 aa9.28□□□□□ -0.92
SF3B1-211ENST00000487698 NUF2Q9BZD4 464 aa9.28□□□□□ -0.92
SF3B1-211ENST00000487698 RDH14Q9HBH5 336 aa9.28□□□□□ -0.92
SF3B1-211ENST00000487698 ZBTB26Q9HCK0 441 aa9.28□□□□□ -0.92
SF3B1-211ENST00000487698 TCF7L2Q9NQB0 619 aa9.28□□□□□ -0.92
SF3B1-211ENST00000487698 TXLNGQ9NUQ3 528 aa9.28□□□□□ -0.92
SF3B1-211ENST00000487698 UTP6Q9NYH9 597 aaKnown RBP9.28□□□□□ -0.92
SF3B1-211ENST00000487698 ARMCX1Q9P291 453 aa9.28□□□□□ -0.92
SF3B1-211ENST00000487698 TSR3Q9UJK0 312 aaKnown RBP9.28□□□□□ -0.92
SF3B1-211ENST00000487698 SORCS3Q9UPU3 1222 aa9.28□□□□□ -0.92
SF3B1-211ENST00000487698 A0A1W2PP55 124 aa9.27□□□□□ -0.93
SF3B1-211ENST00000487698 TMEM202A6NGA9 273 aa9.27□□□□□ -0.93
SF3B1-211ENST00000487698 E2F3O00716 465 aa9.27□□□□□ -0.93
SF3B1-211ENST00000487698 PPP6CO00743 305 aa9.27□□□□□ -0.93
SF3B1-211ENST00000487698 RAD51BO15315 384 aa9.27□□□□□ -0.93
SF3B1-211ENST00000487698 NARSO43776 548 aaKnown RBP9.27□□□□□ -0.93
SF3B1-211ENST00000487698 SLCO2B1O94956 709 aa9.27□□□□□ -0.93
SF3B1-211ENST00000487698 CBX6O95503 412 aa9.27□□□□□ -0.93
SF3B1-211ENST00000487698 ASGR2P07307 311 aa9.27□□□□□ -0.93
SF3B1-211ENST00000487698 FGF4P08620 206 aa9.27□□□□□ -0.93
SF3B1-211ENST00000487698 TSPAN8P19075 237 aa9.27□□□□□ -0.93
SF3B1-211ENST00000487698 TARSP26639 723 aaKnown RBP9.27□□□□□ -0.93
SF3B1-211ENST00000487698 GPR1P46091 355 aa9.27□□□□□ -0.93
SF3B1-211ENST00000487698 INHBCP55103 352 aa9.27□□□□□ -0.93
SF3B1-211ENST00000487698 MRPS21P82921 87 aaKnown RBP9.27□□□□□ -0.93
SF3B1-211ENST00000487698 CLCQ05315 142 aa9.27□□□□□ -0.93
SF3B1-211ENST00000487698 BOP1Q14137 746 aaKnown RBP9.27□□□□□ -0.93
SF3B1-211ENST00000487698 CCDC85BQ15834 202 aaPredicted RBP9.27□□□□□ -0.93
SF3B1-211ENST00000487698 PDCD2Q16342 344 aaPredicted RBP9.27□□□□□ -0.93
SF3B1-211ENST00000487698 UGT3A2Q3SY77 523 aa9.27□□□□□ -0.93
SF3B1-211ENST00000487698 BCL7AQ4VC05 210 aa9.27□□□□□ -0.93
SF3B1-211ENST00000487698 FBXO48Q5FWF7 155 aa9.27□□□□□ -0.93
SF3B1-211ENST00000487698 METTL21CQ5VZV1 264 aa9.27□□□□□ -0.93
SF3B1-211ENST00000487698 SDE2Q6IQ49 451 aa9.27□□□□□ -0.93
SF3B1-211ENST00000487698 ADAMTSL4Q6UY14 1074 aa9.27□□□□□ -0.93
SF3B1-211ENST00000487698 ASRGL1Q7L266 308 aa9.27□□□□□ -0.93
SF3B1-211ENST00000487698 ADGRG6Q86SQ4 1221 aa9.27□□□□□ -0.93
SF3B1-211ENST00000487698 TREML1Q86YW5 311 aa9.27□□□□□ -0.93
SF3B1-211ENST00000487698 HDDC3Q8N4P3 179 aa9.27□□□□□ -0.93
SF3B1-211ENST00000487698 AGAP11Q8TF27 550 aa9.27□□□□□ -0.93
SF3B1-211ENST00000487698 PTCD3Q96EY7 689 aaKnown RBP9.27□□□□□ -0.93
SF3B1-211ENST00000487698 ZCCHC2Q9C0B9 1178 aaKnown RBP9.27□□□□□ -0.93
SF3B1-211ENST00000487698 ARL8BQ9NVJ2 186 aa9.27□□□□□ -0.93
SF3B1-211ENST00000487698 PTBP2Q9UKA9 531 aaKnown RBP9.27□□□□□ -0.93
SF3B1-211ENST00000487698 TRAF6Q9Y4K3 522 aa9.27□□□□□ -0.93
SF3B1-211ENST00000487698 A0A1B0GTL3 188 aa9.26□□□□□ -0.93
SF3B1-211ENST00000487698 IGLON5A6NGN9 336 aa9.26□□□□□ -0.93
SF3B1-211ENST00000487698 TRPC5OSA6NMA1 111 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms