RNA–Protein interactions for RNA: ENST00000487401.1

SREBF1-215, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 477 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-215ENST00000487401 KRT33BQ14525 404 aa12.19□□□□□ -0.46
SREBF1-215ENST00000487401 METRNLQ641Q3 311 aa12.19□□□□□ -0.46
SREBF1-215ENST00000487401 C16orf46Q6P387 395 aa12.19□□□□□ -0.46
SREBF1-215ENST00000487401 RANBP10Q6VN20 620 aa12.19□□□□□ -0.46
SREBF1-215ENST00000487401 CCDC110Q8TBZ0 833 aa12.19□□□□□ -0.46
SREBF1-215ENST00000487401 KLHL6Q8WZ60 621 aa12.19□□□□□ -0.46
SREBF1-215ENST00000487401 STAMBPL1Q96FJ0 436 aa12.19□□□□□ -0.46
SREBF1-215ENST00000487401 MRFAP1L1Q96HT8 127 aa12.19□□□□□ -0.46
SREBF1-215ENST00000487401 SPATA13Q96N96 652 aa12.19□□□□□ -0.46
SREBF1-215ENST00000487401 FAM118BQ9BPY3 351 aa12.19□□□□□ -0.46
SREBF1-215ENST00000487401 RAB33BQ9H082 229 aa12.19□□□□□ -0.46
SREBF1-215ENST00000487401 PDE7BQ9NP56 450 aa12.19□□□□□ -0.46
SREBF1-215ENST00000487401 IMP3Q9NV31 184 aaKnown RBP12.19□□□□□ -0.46
SREBF1-215ENST00000487401 IL17BQ9UHF5 180 aa12.19□□□□□ -0.46
SREBF1-215ENST00000487401 FKBPLQ9UIM3 349 aa12.19□□□□□ -0.46
SREBF1-215ENST00000487401 ACSL5Q9ULC5 683 aa12.19□□□□□ -0.46
SREBF1-215ENST00000487401 KCTD3Q9Y597 815 aa12.19□□□□□ -0.46
SREBF1-215ENST00000487401 RPS6KL1Q9Y6S9 549 aa12.19□□□□□ -0.46
SREBF1-215ENST00000487401 GOLGA6L9A6NEM1 432 aa12.18□□□□□ -0.46
SREBF1-215ENST00000487401 SPAG6O75602 509 aa12.18□□□□□ -0.46
SREBF1-215ENST00000487401 SRP72O76094 671 aaKnown RBP12.18□□□□□ -0.46
SREBF1-215ENST00000487401 KIAA0754O94854 1291 aa12.18□□□□□ -0.46
SREBF1-215ENST00000487401 WISP1O95388 367 aa12.18□□□□□ -0.46
SREBF1-215ENST00000487401 PYGMP11217 842 aa12.18□□□□□ -0.46
SREBF1-215ENST00000487401 MTHFD1P11586 935 aaKnown RBP12.18□□□□□ -0.46
SREBF1-215ENST00000487401 NELFEP18615 380 aaKnown RBP12.18□□□□□ -0.46
SREBF1-215ENST00000487401 TCN2P20062 427 aa12.18□□□□□ -0.46
SREBF1-215ENST00000487401 ADRA1AP35348 466 aa12.18□□□□□ -0.46
SREBF1-215ENST00000487401 DLSTP36957 453 aa12.18□□□□□ -0.46
SREBF1-215ENST00000487401 TMPRSS15P98073 1019 aa12.18□□□□□ -0.46
SREBF1-215ENST00000487401 CDC20Q12834 499 aa12.18□□□□□ -0.46
SREBF1-215ENST00000487401 DEFB109BQ30KR1 87 aa12.18□□□□□ -0.46
SREBF1-215ENST00000487401 ARMC6Q6NXE6 501 aa12.18□□□□□ -0.46
SREBF1-215ENST00000487401 KIAA1328Q86T90 577 aa12.18□□□□□ -0.46
SREBF1-215ENST00000487401 PPP1R3BQ86XI6 285 aa12.18□□□□□ -0.46
SREBF1-215ENST00000487401 UBL4BQ8N7F7 174 aa12.18□□□□□ -0.46
SREBF1-215ENST00000487401 SIDT2Q8NBJ9 832 aaKnown RBP12.18□□□□□ -0.46
SREBF1-215ENST00000487401 GALNT6Q8NCL4 622 aa12.18□□□□□ -0.46
SREBF1-215ENST00000487401 GPR150Q8NGU9 434 aa12.18□□□□□ -0.46
SREBF1-215ENST00000487401 OR2L2Q8NH16 312 aa12.18□□□□□ -0.46
SREBF1-215ENST00000487401 HEXDCQ8WVB3 486 aa12.18□□□□□ -0.46
SREBF1-215ENST00000487401 STARD8Q92502 1023 aa12.18□□□□□ -0.46
SREBF1-215ENST00000487401 UBXN4Q92575 508 aa12.18□□□□□ -0.46
SREBF1-215ENST00000487401 ULK4Q96C45 1275 aa12.18□□□□□ -0.46
SREBF1-215ENST00000487401 RNF31Q96EP0 1072 aa12.18□□□□□ -0.46
SREBF1-215ENST00000487401 C12orf66Q96MD2 445 aa12.18□□□□□ -0.46
SREBF1-215ENST00000487401 TBL1YQ9BQ87 522 aa12.18□□□□□ -0.46
SREBF1-215ENST00000487401 GORASP1Q9BQQ3 440 aa12.18□□□□□ -0.46
SREBF1-215ENST00000487401 WWP1Q9H0M0 922 aa12.18□□□□□ -0.46
SREBF1-215ENST00000487401 CLMPQ9H6B4 373 aa12.18□□□□□ -0.46
SREBF1-215ENST00000487401 FAM8A1Q9UBU6 413 aa12.18□□□□□ -0.46
SREBF1-215ENST00000487401 FEZ2Q9UHY8 353 aaPredicted RBP12.18□□□□□ -0.46
SREBF1-215ENST00000487401 LNPEPQ9UIQ6 1025 aa12.18□□□□□ -0.46
SREBF1-215ENST00000487401 CRLS1Q9UJA2 301 aa12.18□□□□□ -0.46
SREBF1-215ENST00000487401 AMFRQ9UKV5 643 aa12.18□□□□□ -0.46
SREBF1-215ENST00000487401 PCDHB3Q9Y5E6 796 aa12.18□□□□□ -0.46
SREBF1-215ENST00000487401 CFAP20Q9Y6A4 193 aaKnown RBP12.18□□□□□ -0.46
SREBF1-215ENST00000487401 COLEC10Q9Y6Z7 277 aa12.18□□□□□ -0.46
SREBF1-215ENST00000487401 AHCTF1Q8WYP5 2266 aa12.17□□□□□ -0.46
SREBF1-215ENST00000487401 PIEZO2Q9H5I5 2752 aa12.17□□□□□ -0.46
SREBF1-215ENST00000487401 UBA6A0AVT1 1052 aaPredicted RBP12.17□□□□□ -0.46
SREBF1-215ENST00000487401 CFAP99D6REC4 459 aa12.17□□□□□ -0.46
SREBF1-215ENST00000487401 SUV39H1O43463 412 aa12.17□□□□□ -0.46
SREBF1-215ENST00000487401 KATNA1O75449 491 aa12.17□□□□□ -0.46
SREBF1-215ENST00000487401 MT-ND3P03897 115 aa12.17□□□□□ -0.46
SREBF1-215ENST00000487401 POLBP06746 335 aa12.17□□□□□ -0.46
SREBF1-215ENST00000487401 SLC35G4P0C7Q5 338 aa12.17□□□□□ -0.46
SREBF1-215ENST00000487401 FGF5P12034 268 aa12.17□□□□□ -0.46
SREBF1-215ENST00000487401 ZNF28P17035 718 aa12.17□□□□□ -0.46
SREBF1-215ENST00000487401 ITGALP20701 1170 aa12.17□□□□□ -0.46
SREBF1-215ENST00000487401 HADHAP40939 763 aa12.17□□□□□ -0.46
SREBF1-215ENST00000487401 VAV2P52735 878 aa12.17□□□□□ -0.46
SREBF1-215ENST00000487401 OLIG2Q13516 323 aa12.17□□□□□ -0.46
SREBF1-215ENST00000487401 SPARCL1Q14515 664 aa12.17□□□□□ -0.46
SREBF1-215ENST00000487401 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.17□□□□□ -0.46
SREBF1-215ENST00000487401 BCL7AQ4VC05 210 aa12.17□□□□□ -0.46
SREBF1-215ENST00000487401 DNTTIP2Q5QJE6 756 aaKnown RBP12.17□□□□□ -0.46
SREBF1-215ENST00000487401 AADACL2Q6P093 401 aa12.17□□□□□ -0.46
SREBF1-215ENST00000487401 RAD9BQ6WBX8 426 aa12.17□□□□□ -0.46
SREBF1-215ENST00000487401 ARHGEF18Q6ZSZ5 1173 aa12.17□□□□□ -0.46
SREBF1-215ENST00000487401 PEX26Q7Z412 305 aa12.17□□□□□ -0.46
SREBF1-215ENST00000487401 CFAP206Q8IYR0 622 aa12.17□□□□□ -0.46
SREBF1-215ENST00000487401 TXLNBQ8N3L3 684 aa12.17□□□□□ -0.46
SREBF1-215ENST00000487401 TTC13Q8NBP0 860 aa12.17□□□□□ -0.46
SREBF1-215ENST00000487401 APOBEC4Q8WW27 367 aaKnown RBP12.17□□□□□ -0.46
SREBF1-215ENST00000487401 ZFPM2Q8WW38 1151 aa12.17□□□□□ -0.46
SREBF1-215ENST00000487401 INSM2Q96T92 566 aaPredicted RBP12.17□□□□□ -0.46
SREBF1-215ENST00000487401 CD180Q99467 661 aa12.17□□□□□ -0.46
SREBF1-215ENST00000487401 COPS8Q99627 209 aa12.17□□□□□ -0.46
SREBF1-215ENST00000487401 LACRTQ9GZZ8 138 aa12.17□□□□□ -0.46
SREBF1-215ENST00000487401 RBSNQ9H1K0 784 aa12.17□□□□□ -0.46
SREBF1-215ENST00000487401 FAM96AQ9H5X1 160 aa12.17□□□□□ -0.46
SREBF1-215ENST00000487401 HRASLS2Q9NWW9 162 aa12.17□□□□□ -0.46
SREBF1-215ENST00000487401 TUBD1Q9UJT1 453 aa12.17□□□□□ -0.46
SREBF1-215ENST00000487401 CROTQ9UKG9 612 aa12.17□□□□□ -0.46
SREBF1-215ENST00000487401 RARRES3Q9UL19 164 aa12.17□□□□□ -0.46
SREBF1-215ENST00000487401 PADI1Q9ULC6 663 aa12.17□□□□□ -0.46
SREBF1-215ENST00000487401 REXO2Q9Y3B8 237 aaKnown RBP12.17□□□□□ -0.46
SREBF1-215ENST00000487401 IGHV5-51A0A0C4DH38 117 aa12.16□□□□□ -0.46
SREBF1-215ENST00000487401 GRID2IPA4D2P6 1211 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms