RNA–Protein interactions for RNA: ENST00000487354.1

MCF2L-228, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 553 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-228ENST00000487354 SNX7Q9UNH6 387 aa14.98□□□□□ -0.01
MCF2L-228ENST00000487354 PSMD13Q9UNM6 376 aa14.98□□□□□ -0.01
MCF2L-228ENST00000487354 SLC5A6Q9Y289 635 aa14.98□□□□□ -0.01
MCF2L-228ENST00000487354 NTNG1Q9Y2I2 539 aa14.98□□□□□ -0.01
MCF2L-228ENST00000487354 ADGRG4Q8IZF6 3080 aa14.98□□□□□ -0.01
MCF2L-228ENST00000487354 SNRNP200O75643 2136 aaKnown RBP14.98□□□□□ -0.01
MCF2L-228ENST00000487354 MEN1O00255 615 aa14.97□□□□□ -0.01
MCF2L-228ENST00000487354 DDX3YO15523 660 aaKnown RBP14.97□□□□□ -0.01
MCF2L-228ENST00000487354 CYP1A2P05177 515 aa14.97□□□□□ -0.01
MCF2L-228ENST00000487354 MTHFD1P11586 935 aaKnown RBP14.97□□□□□ -0.01
MCF2L-228ENST00000487354 PDE1BQ01064 536 aa14.97□□□□□ -0.01
MCF2L-228ENST00000487354 KLHL30Q0D2K2 578 aa14.97□□□□□ -0.01
MCF2L-228ENST00000487354 NFE2L1Q14494 772 aa14.97□□□□□ -0.01
MCF2L-228ENST00000487354 ZNF385CQ66K41 422 aaPredicted RBP14.97□□□□□ -0.01
MCF2L-228ENST00000487354 ZGRF1Q86YA3 2104 aa14.97□□□□□ -0.01
MCF2L-228ENST00000487354 PLD5Q8N7P1 536 aa14.97□□□□□ -0.01
MCF2L-228ENST00000487354 RASGEF1AQ8N9B8 481 aa14.97□□□□□ -0.01
MCF2L-228ENST00000487354 OR8K5Q8NH50 307 aa14.97□□□□□ -0.01
MCF2L-228ENST00000487354 BPIFA1Q9NP55 256 aa14.97□□□□□ -0.01
MCF2L-228ENST00000487354 RAD18Q9NS91 495 aa14.97□□□□□ -0.01
MCF2L-228ENST00000487354 LMBRD1Q9NUN5 540 aa14.97□□□□□ -0.01
MCF2L-228ENST00000487354 MAP10Q9P2G4 905 aa14.97□□□□□ -0.01
MCF2L-228ENST00000487354 CFAP20Q9Y6A4 193 aaKnown RBP14.97□□□□□ -0.01
MCF2L-228ENST00000487354 F8P00451 2351 aa14.96□□□□□ -0.01
MCF2L-228ENST00000487354 GAPDHSO14556 408 aaPredicted RBP14.96□□□□□ -0.01
MCF2L-228ENST00000487354 ZBTB11O95625 1053 aaPredicted RBP14.96□□□□□ -0.01
MCF2L-228ENST00000487354 CDK11BP21127 795 aaKnown RBP14.96□□□□□ -0.01
MCF2L-228ENST00000487354 VARSP26640 1264 aaKnown RBP14.96□□□□□ -0.01
MCF2L-228ENST00000487354 HNRNPH3P31942 346 aaKnown RBP14.96□□□□□ -0.01
MCF2L-228ENST00000487354 GJC1P36383 396 aa14.96□□□□□ -0.01
MCF2L-228ENST00000487354 HALP42357 657 aa14.96□□□□□ -0.01
MCF2L-228ENST00000487354 ARCN1P48444 511 aaKnown RBP14.96□□□□□ -0.01
MCF2L-228ENST00000487354 GSDMDP57764 484 aa14.96□□□□□ -0.01
MCF2L-228ENST00000487354 NOMO1Q15155 1222 aa14.96□□□□□ -0.01
MCF2L-228ENST00000487354 ZRANB3Q5FWF4 1079 aa14.96□□□□□ -0.01
MCF2L-228ENST00000487354 MED25Q71SY5 747 aa14.96□□□□□ -0.01
MCF2L-228ENST00000487354 AMZ2Q86W34 360 aa14.96□□□□□ -0.01
MCF2L-228ENST00000487354 SRRM1Q8IYB3 904 aaKnown RBP14.96□□□□□ -0.01
MCF2L-228ENST00000487354 TTC30BQ8N4P2 665 aa14.96□□□□□ -0.01
MCF2L-228ENST00000487354 CISD2Q8N5K1 135 aaKnown RBP14.96□□□□□ -0.01
MCF2L-228ENST00000487354 TMEM102Q8N9M5 508 aaPredicted RBP14.96□□□□□ -0.01
MCF2L-228ENST00000487354 OR1L3Q8NH93 324 aa14.96□□□□□ -0.01
MCF2L-228ENST00000487354 C5orf34Q96MH7 638 aa14.96□□□□□ -0.01
MCF2L-228ENST00000487354 INSM2Q96T92 566 aaPredicted RBP14.96□□□□□ -0.01
MCF2L-228ENST00000487354 TLR10Q9BXR5 811 aa14.96□□□□□ -0.01
MCF2L-228ENST00000487354 GPR63Q9BZJ6 419 aa14.96□□□□□ -0.01
MCF2L-228ENST00000487354 IL26Q9NPH9 171 aa14.96□□□□□ -0.01
MCF2L-228ENST00000487354 HAUS2Q9NVX0 235 aa14.96□□□□□ -0.01
MCF2L-228ENST00000487354 HRASLS2Q9NWW9 162 aa14.96□□□□□ -0.01
MCF2L-228ENST00000487354 UBA6A0AVT1 1052 aaPredicted RBP14.95□□□□□ -0.02
MCF2L-228ENST00000487354 ANKUB1A6NFN9 424 aa14.95□□□□□ -0.02
MCF2L-228ENST00000487354 POP7O75817 140 aaKnown RBP14.95□□□□□ -0.02
MCF2L-228ENST00000487354 KLF7O75840 302 aaPredicted RBP14.95□□□□□ -0.02
MCF2L-228ENST00000487354 MT-CYBP00156 380 aaPredicted RBP14.95□□□□□ -0.02
MCF2L-228ENST00000487354 VCLP18206 1134 aa14.95□□□□□ -0.02
MCF2L-228ENST00000487354 MX2P20592 715 aa14.95□□□□□ -0.02
MCF2L-228ENST00000487354 CDK18Q07002 472 aa14.95□□□□□ -0.02
MCF2L-228ENST00000487354 NCF4Q15080 339 aa14.95□□□□□ -0.02
MCF2L-228ENST00000487354 PLCL1Q15111 1095 aa14.95□□□□□ -0.02
MCF2L-228ENST00000487354 SLC14A2Q15849 920 aa14.95□□□□□ -0.02
MCF2L-228ENST00000487354 PCSK7Q16549 785 aa14.95□□□□□ -0.02
MCF2L-228ENST00000487354 VWA5B1Q5TIE3 1220 aa14.95□□□□□ -0.02
MCF2L-228ENST00000487354 KLHL35Q6PF15 583 aa14.95□□□□□ -0.02
MCF2L-228ENST00000487354 SPOCD1Q6ZMY3 1216 aa14.95□□□□□ -0.02
MCF2L-228ENST00000487354 TMEM151BQ8IW70 566 aa14.95□□□□□ -0.02
MCF2L-228ENST00000487354 SYTL1Q8IYJ3 562 aa14.95□□□□□ -0.02
MCF2L-228ENST00000487354 IQCKQ8N0W5 287 aa14.95□□□□□ -0.02
MCF2L-228ENST00000487354 CCNYQ8ND76 341 aa14.95□□□□□ -0.02
MCF2L-228ENST00000487354 SPATA22Q8NHS9 363 aa14.95□□□□□ -0.02
MCF2L-228ENST00000487354 CPT1BQ92523 772 aa14.95□□□□□ -0.02
MCF2L-228ENST00000487354 NRTNQ99748 197 aa14.95□□□□□ -0.02
MCF2L-228ENST00000487354 IMP3Q9NV31 184 aaKnown RBP14.95□□□□□ -0.02
MCF2L-228ENST00000487354 C5AR2Q9P296 337 aa14.95□□□□□ -0.02
MCF2L-228ENST00000487354 SLC24A2Q9UI40 661 aa14.95□□□□□ -0.02
MCF2L-228ENST00000487354 NENFQ9UMX5 172 aa14.95□□□□□ -0.02
MCF2L-228ENST00000487354 B3GNT3Q9Y2A9 372 aa14.95□□□□□ -0.02
MCF2L-228ENST00000487354 POLQO75417 2590 aa14.95□□□□□ -0.02
MCF2L-228ENST00000487354 OR2AG2A6NM03 316 aa14.94□□□□□ -0.02
MCF2L-228ENST00000487354 MASP2O00187 686 aa14.94□□□□□ -0.02
MCF2L-228ENST00000487354 KCNJ13O60928 360 aa14.94□□□□□ -0.02
MCF2L-228ENST00000487354 KLK3P07288 261 aaPredicted RBP14.94□□□□□ -0.02
MCF2L-228ENST00000487354 HMGCLP35914 325 aa14.94□□□□□ -0.02
MCF2L-228ENST00000487354 ARL4DP49703 201 aa14.94□□□□□ -0.02
MCF2L-228ENST00000487354 PDK2Q15119 407 aa14.94□□□□□ -0.02
MCF2L-228ENST00000487354 STX1AQ16623 288 aa14.94□□□□□ -0.02
MCF2L-228ENST00000487354 PTCHD3Q3KNS1 767 aa14.94□□□□□ -0.02
MCF2L-228ENST00000487354 METRNLQ641Q3 311 aa14.94□□□□□ -0.02
MCF2L-228ENST00000487354 IGFL3Q6UXB1 125 aa14.94□□□□□ -0.02
MCF2L-228ENST00000487354 MRGPREQ86SM8 312 aa14.94□□□□□ -0.02
MCF2L-228ENST00000487354 NT5DC3Q86UY8 548 aa14.94□□□□□ -0.02
MCF2L-228ENST00000487354 OOSP2Q86WS3 158 aa14.94□□□□□ -0.02
MCF2L-228ENST00000487354 CARFQ8N187 725 aa14.94□□□□□ -0.02
MCF2L-228ENST00000487354 BEND7Q8N7W2 519 aaPredicted RBP14.94□□□□□ -0.02
MCF2L-228ENST00000487354 DDHD1Q8NEL9 900 aa14.94□□□□□ -0.02
MCF2L-228ENST00000487354 SPDYE1Q8NFV5 336 aaPredicted RBP14.94□□□□□ -0.02
MCF2L-228ENST00000487354 DTX3LQ8TDB6 740 aa14.94□□□□□ -0.02
MCF2L-228ENST00000487354 NAT14Q8WUY8 206 aa14.94□□□□□ -0.02
MCF2L-228ENST00000487354 RAPGEF5Q92565 580 aa14.94□□□□□ -0.02
MCF2L-228ENST00000487354 OLFM3Q96PB7 478 aa14.94□□□□□ -0.02
MCF2L-228ENST00000487354 SLC25A51Q9H1U9 297 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms