RNA–Protein interactions for RNA: ENST00000487252.1

TRIM56-204, Transcript of tripartite motif containing 56, humanhuman

TSL 3

Gene TRIM56, Length 735 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-204ENST00000487252 TMEM59LQ9UK28 342 aa11.38□□□□□ -0.59
TRIM56-204ENST00000487252 BTRCQ9Y297 605 aa11.38□□□□□ -0.59
TRIM56-204ENST00000487252 ZNF835Q9Y2P0 537 aa11.38□□□□□ -0.59
TRIM56-204ENST00000487252 MEMO1Q9Y316 297 aa11.38□□□□□ -0.59
TRIM56-204ENST00000487252 INTS1Q8N201 2190 aaKnown RBP11.38□□□□□ -0.59
TRIM56-204ENST00000487252 CUBNO60494 3623 aa11.37□□□□□ -0.59
TRIM56-204ENST00000487252 A0A1W2PQ67 120 aa11.37□□□□□ -0.59
TRIM56-204ENST00000487252 FOXO6A8MYZ6 492 aa11.37□□□□□ -0.59
TRIM56-204ENST00000487252 AGPSO00116 658 aa11.37□□□□□ -0.59
TRIM56-204ENST00000487252 WIPF1O43516 503 aa11.37□□□□□ -0.59
TRIM56-204ENST00000487252 LDB2O43679 373 aa11.37□□□□□ -0.59
TRIM56-204ENST00000487252 NUAK1O60285 661 aa11.37□□□□□ -0.59
TRIM56-204ENST00000487252 GYPCP04921 128 aa11.37□□□□□ -0.59
TRIM56-204ENST00000487252 ESRRAP11474 423 aaPredicted RBP11.37□□□□□ -0.59
TRIM56-204ENST00000487252 BRAFP15056 766 aa11.37□□□□□ -0.59
TRIM56-204ENST00000487252 CASP6P55212 293 aa11.37□□□□□ -0.59
TRIM56-204ENST00000487252 AP1S1P61966 158 aa11.37□□□□□ -0.59
TRIM56-204ENST00000487252 PTCHD3Q3KNS1 767 aa11.37□□□□□ -0.59
TRIM56-204ENST00000487252 PRAMEF13Q5VWM6 474 aa11.37□□□□□ -0.59
TRIM56-204ENST00000487252 ABRAXAS1Q6UWZ7 409 aa11.37□□□□□ -0.59
TRIM56-204ENST00000487252 Q6ZPB1 254 aaPredicted RBP11.37□□□□□ -0.59
TRIM56-204ENST00000487252 TMEM200AQ86VY9 491 aa11.37□□□□□ -0.59
TRIM56-204ENST00000487252 EHBP1Q8NDI1 1231 aa11.37□□□□□ -0.59
TRIM56-204ENST00000487252 OR2Y1Q8NGV0 311 aa11.37□□□□□ -0.59
TRIM56-204ENST00000487252 NACC2Q96BF6 587 aa11.37□□□□□ -0.59
TRIM56-204ENST00000487252 SCRN2Q96FV2 425 aa11.37□□□□□ -0.59
TRIM56-204ENST00000487252 PDCL3Q9H2J4 239 aa11.37□□□□□ -0.59
TRIM56-204ENST00000487252 LRRC19Q9H756 370 aa11.37□□□□□ -0.59
TRIM56-204ENST00000487252 ACTR5Q9H9F9 607 aaPredicted RBP11.37□□□□□ -0.59
TRIM56-204ENST00000487252 GPAMQ9HCL2 828 aa11.37□□□□□ -0.59
TRIM56-204ENST00000487252 TAB2Q9NYJ8 693 aa11.37□□□□□ -0.59
TRIM56-204ENST00000487252 KCNN3Q9UGI6 736 aa11.37□□□□□ -0.59
TRIM56-204ENST00000487252 TINAGQ9UJW2 476 aa11.37□□□□□ -0.59
TRIM56-204ENST00000487252 SIK3Q9Y2K2 1263 aa11.37□□□□□ -0.59
TRIM56-204ENST00000487252 PPIL1Q9Y3C6 166 aa11.37□□□□□ -0.59
TRIM56-204ENST00000487252 ZANQ9Y493 2812 aa11.36□□□□□ -0.59
TRIM56-204ENST00000487252 C9J4A7 227 aa11.36□□□□□ -0.59
TRIM56-204ENST00000487252 ASMTLO95671 621 aa11.36□□□□□ -0.59
TRIM56-204ENST00000487252 MSL3P1P0C860 447 aa11.36□□□□□ -0.59
TRIM56-204ENST00000487252 CYP2A6P11509 494 aaPredicted RBP11.36□□□□□ -0.59
TRIM56-204ENST00000487252 RBPJQ06330 500 aa11.36□□□□□ -0.59
TRIM56-204ENST00000487252 PTPRRQ15256 657 aa11.36□□□□□ -0.59
TRIM56-204ENST00000487252 WASH2PQ6VEQ5 465 aa11.36□□□□□ -0.59
TRIM56-204ENST00000487252 TMTC1Q8IUR5 882 aa11.36□□□□□ -0.59
TRIM56-204ENST00000487252 TRIM48Q8IWZ4 208 aa11.36□□□□□ -0.59
TRIM56-204ENST00000487252 CARFQ8N187 725 aa11.36□□□□□ -0.59
TRIM56-204ENST00000487252 WFDC11Q8NEX6 87 aa11.36□□□□□ -0.59
TRIM56-204ENST00000487252 OR1N1Q8NGS0 311 aa11.36□□□□□ -0.59
TRIM56-204ENST00000487252 MBD6Q96DN6 1003 aa11.36□□□□□ -0.59
TRIM56-204ENST00000487252 LMF1Q96S06 567 aa11.36□□□□□ -0.59
TRIM56-204ENST00000487252 LIME1Q9H400 295 aa11.36□□□□□ -0.59
TRIM56-204ENST00000487252 EPS8L2Q9H6S3 715 aa11.36□□□□□ -0.59
TRIM56-204ENST00000487252 NPDC1Q9NQX5 325 aaPredicted RBP11.36□□□□□ -0.59
TRIM56-204ENST00000487252 KLC4Q9NSK0 619 aa11.36□□□□□ -0.59
TRIM56-204ENST00000487252 HIVEP2P31629 2446 aa11.35□□□□□ -0.59
TRIM56-204ENST00000487252 PROM1O43490 865 aa11.35□□□□□ -0.59
TRIM56-204ENST00000487252 SOCS5O75159 536 aa11.35□□□□□ -0.59
TRIM56-204ENST00000487252 CNOT3O75175 753 aaKnown RBP11.35□□□□□ -0.59
TRIM56-204ENST00000487252 WISP2O76076 250 aa11.35□□□□□ -0.59
TRIM56-204ENST00000487252 LCA5LO95447 670 aa11.35□□□□□ -0.59
TRIM56-204ENST00000487252 ZBTB11O95625 1053 aaPredicted RBP11.35□□□□□ -0.59
TRIM56-204ENST00000487252 UMODP07911 640 aa11.35□□□□□ -0.59
TRIM56-204ENST00000487252 TPM1P09493 284 aa11.35□□□□□ -0.59
TRIM56-204ENST00000487252 ADSLP30566 484 aaPredicted RBP11.35□□□□□ -0.59
TRIM56-204ENST00000487252 ARL4DP49703 201 aa11.35□□□□□ -0.59
TRIM56-204ENST00000487252 FKBP3Q00688 224 aaKnown RBP11.35□□□□□ -0.59
TRIM56-204ENST00000487252 PTSQ03393 145 aa11.35□□□□□ -0.59
TRIM56-204ENST00000487252 MFAP5Q13361 173 aa11.35□□□□□ -0.59
TRIM56-204ENST00000487252 FAM102AQ5T9C2 384 aaPredicted RBP11.35□□□□□ -0.59
TRIM56-204ENST00000487252 RAD9BQ6WBX8 426 aa11.35□□□□□ -0.59
TRIM56-204ENST00000487252 SYT10Q6XYQ8 523 aa11.35□□□□□ -0.59
TRIM56-204ENST00000487252 TRIM72Q6ZMU5 477 aa11.35□□□□□ -0.59
TRIM56-204ENST00000487252 DMRTC2Q8IXT2 367 aaPredicted RBP11.35□□□□□ -0.59
TRIM56-204ENST00000487252 PHF10Q8WUB8 498 aaKnown RBP11.35□□□□□ -0.59
TRIM56-204ENST00000487252 ZNF592Q92610 1267 aa11.35□□□□□ -0.59
TRIM56-204ENST00000487252 PTERQ96BW5 349 aa11.35□□□□□ -0.59
TRIM56-204ENST00000487252 ZNF559Q9BR84 538 aa11.35□□□□□ -0.59
TRIM56-204ENST00000487252 NDC1Q9BTX1 674 aa11.35□□□□□ -0.59
TRIM56-204ENST00000487252 CARD9Q9H257 536 aa11.35□□□□□ -0.59
TRIM56-204ENST00000487252 VPS16Q9H269 839 aa11.35□□□□□ -0.59
TRIM56-204ENST00000487252 SYNCQ9H7C4 482 aa11.35□□□□□ -0.59
TRIM56-204ENST00000487252 SLC6A20Q9NP91 592 aa11.35□□□□□ -0.59
TRIM56-204ENST00000487252 ZNF358Q9NW07 568 aa11.35□□□□□ -0.59
TRIM56-204ENST00000487252 PTRH2Q9Y3E5 179 aaKnown RBP11.35□□□□□ -0.59
TRIM56-204ENST00000487252 PCDHGC4Q9Y5F7 938 aa11.35□□□□□ -0.59
TRIM56-204ENST00000487252 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP11.34□□□□□ -0.59
TRIM56-204ENST00000487252 OR52A4PA6NMU1 304 aa11.34□□□□□ -0.59
TRIM56-204ENST00000487252 FAM171A2A8MVW0 826 aa11.34□□□□□ -0.59
TRIM56-204ENST00000487252 PALMO75781 387 aa11.34□□□□□ -0.59
TRIM56-204ENST00000487252 SLU7O95391 586 aaKnown RBP11.34□□□□□ -0.59
TRIM56-204ENST00000487252 LY6G6DO95868 133 aa11.34□□□□□ -0.59
TRIM56-204ENST00000487252 CCDC175P0C221 793 aa11.34□□□□□ -0.59
TRIM56-204ENST00000487252 EPHB2P29323 1055 aa11.34□□□□□ -0.59
TRIM56-204ENST00000487252 CDH5P33151 784 aaPredicted RBP11.34□□□□□ -0.59
TRIM56-204ENST00000487252 FOLR3P41439 243 aa11.34□□□□□ -0.59
TRIM56-204ENST00000487252 SCNN1BP51168 640 aa11.34□□□□□ -0.59
TRIM56-204ENST00000487252 ATP11AP98196 1134 aa11.34□□□□□ -0.59
TRIM56-204ENST00000487252 TFF3Q07654 80 aa11.34□□□□□ -0.59
TRIM56-204ENST00000487252 ADCY2Q08462 1091 aa11.34□□□□□ -0.59
TRIM56-204ENST00000487252 GTF3C1Q12789 2109 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms