RNA–Protein interactions for RNA: ENST00000487245.5

HLA-C-208, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,880 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-208ENST00000487245 DPP10Q8N608 796 aa25.75■■□□□ 1.71
HLA-C-208ENST00000487245 ADAMTS16Q8TE57 1224 aa25.75■■□□□ 1.71
HLA-C-208ENST00000487245 ZNF334Q9HCZ1 680 aaPredicted RBP25.75■■□□□ 1.71
HLA-C-208ENST00000487245 CD320Q9NPF0 282 aa25.75■■□□□ 1.71
HLA-C-208ENST00000487245 FNDC3AQ9Y2H6 1198 aaKnown RBP25.75■■□□□ 1.71
HLA-C-208ENST00000487245 TRIM17Q9Y577 477 aa25.75■■□□□ 1.71
HLA-C-208ENST00000487245 NCF1BA6NI72 391 aaPredicted RBP25.74■■□□□ 1.71
HLA-C-208ENST00000487245 NCF1CA8MVU1 366 aaPredicted RBP25.74■■□□□ 1.71
HLA-C-208ENST00000487245 C9JVG2 144 aa25.74■■□□□ 1.71
HLA-C-208ENST00000487245 H3BSA7 217 aa25.74■■□□□ 1.71
HLA-C-208ENST00000487245 NCF1P14598 390 aaPredicted RBP25.74■■□□□ 1.71
HLA-C-208ENST00000487245 SLC5A2P31639 672 aa25.74■■□□□ 1.71
HLA-C-208ENST00000487245 UFM1P61960 85 aa25.74■■□□□ 1.71
HLA-C-208ENST00000487245 YBX1P67809 324 aaKnown RBP25.74■■□□□ 1.71
HLA-C-208ENST00000487245 BCL2L1Q07817 233 aa25.74■■□□□ 1.71
HLA-C-208ENST00000487245 SLC36A3Q495N2 470 aa25.74■■□□□ 1.71
HLA-C-208ENST00000487245 PAGE3Q5JUK9 113 aa25.74■■□□□ 1.71
HLA-C-208ENST00000487245 TBC1D21Q8IYX1 336 aa25.74■■□□□ 1.71
HLA-C-208ENST00000487245 OR2T11Q8NH01 316 aa25.74■■□□□ 1.71
HLA-C-208ENST00000487245 TEX37Q96LM6 180 aa25.74■■□□□ 1.71
HLA-C-208ENST00000487245 SLC22A12Q96S37 553 aa25.74■■□□□ 1.71
HLA-C-208ENST00000487245 KCTD14Q9BQ13 255 aaPredicted RBP25.74■■□□□ 1.71
HLA-C-208ENST00000487245 ADI1Q9BV57 179 aa25.74■■□□□ 1.71
HLA-C-208ENST00000487245 CLPBQ9H078 707 aa25.74■■□□□ 1.71
HLA-C-208ENST00000487245 IL21Q9HBE4 155 aa25.74■■□□□ 1.71
HLA-C-208ENST00000487245 HEBP1Q9NRV9 189 aa25.74■■□□□ 1.71
HLA-C-208ENST00000487245 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP25.74■■□□□ 1.71
HLA-C-208ENST00000487245 SMOXQ9NWM0 555 aa25.74■■□□□ 1.71
HLA-C-208ENST00000487245 RSL24D1Q9UHA3 163 aaKnown RBP25.74■■□□□ 1.71
HLA-C-208ENST00000487245 ACOX3O15254 700 aa25.74■■□□□ 1.71
HLA-C-208ENST00000487245 RFC2P35250 354 aa25.74■■□□□ 1.71
HLA-C-208ENST00000487245 PLOD1Q02809 727 aaPredicted RBP25.74■■□□□ 1.71
HLA-C-208ENST00000487245 EMX2Q04743 252 aa25.74■■□□□ 1.71
HLA-C-208ENST00000487245 MERTKQ12866 999 aa25.74■■□□□ 1.71
HLA-C-208ENST00000487245 PCBP2Q15366 365 aaKnown RBP eCLIP25.74■■□□□ 1.711e-323■■■■■ 76.1
HLA-C-208ENST00000487245 TGFBIQ15582 683 aa25.74■■□□□ 1.71
HLA-C-208ENST00000487245 C6orf136Q5SQH8 315 aa25.74■■□□□ 1.71
HLA-C-208ENST00000487245 PROSER1Q86XN7 944 aa25.74■■□□□ 1.71
HLA-C-208ENST00000487245 CPXM2Q8N436 756 aa25.74■■□□□ 1.71
HLA-C-208ENST00000487245 FAM47BQ8NA70 645 aa25.74■■□□□ 1.71
HLA-C-208ENST00000487245 GRIN3AQ8TCU5 1115 aa25.74■■□□□ 1.71
HLA-C-208ENST00000487245 SARS2Q9NP81 518 aaKnown RBP25.74■■□□□ 1.71
HLA-C-208ENST00000487245 SUN2Q9UH99 717 aa25.74■■□□□ 1.71
HLA-C-208ENST00000487245 SOCS5O75159 536 aa25.73■■□□□ 1.71
HLA-C-208ENST00000487245 S100BP04271 92 aaPredicted RBP25.73■■□□□ 1.71
HLA-C-208ENST00000487245 ENO2P09104 434 aaPredicted RBP25.73■■□□□ 1.71
HLA-C-208ENST00000487245 CTPS1P17812 591 aa25.73■■□□□ 1.71
HLA-C-208ENST00000487245 OXTRP30559 389 aa25.73■■□□□ 1.71
HLA-C-208ENST00000487245 CREMQ03060 361 aa25.73■■□□□ 1.71
HLA-C-208ENST00000487245 TLE2Q04725 743 aa25.73■■□□□ 1.71
HLA-C-208ENST00000487245 PTPRRQ15256 657 aa25.73■■□□□ 1.71
HLA-C-208ENST00000487245 MPP7Q5T2T1 576 aa25.73■■□□□ 1.71
HLA-C-208ENST00000487245 PTRHD1Q6GMV3 140 aaKnown RBP25.73■■□□□ 1.71
HLA-C-208ENST00000487245 ZFAND4Q86XD8 727 aa25.73■■□□□ 1.71
HLA-C-208ENST00000487245 KIAA2013Q8IYS2 634 aa25.73■■□□□ 1.71
HLA-C-208ENST00000487245 RBFAQ8N0V3 343 aa25.73■■□□□ 1.71
HLA-C-208ENST00000487245 VPS33AQ96AX1 596 aa25.73■■□□□ 1.71
HLA-C-208ENST00000487245 ISG20Q96AZ6 181 aaKnown RBP25.73■■□□□ 1.71
HLA-C-208ENST00000487245 ZFYVE1Q9HBF4 777 aa25.73■■□□□ 1.71
HLA-C-208ENST00000487245 GNPTGQ9UJJ9 305 aa25.73■■□□□ 1.71
HLA-C-208ENST00000487245 ANAPC2Q9UJX6 822 aa25.73■■□□□ 1.71
HLA-C-208ENST00000487245 COL4A6Q14031 1691 aa25.73■■□□□ 1.71
HLA-C-208ENST00000487245 A0A087WXM4 84 aa25.72■■□□□ 1.71
HLA-C-208ENST00000487245 A0A1B0GVG6 124 aa25.72■■□□□ 1.71
HLA-C-208ENST00000487245 IFRD1O00458 451 aaPredicted RBP25.72■■□□□ 1.71
HLA-C-208ENST00000487245 RGS4P49798 205 aa25.72■■□□□ 1.71
HLA-C-208ENST00000487245 APLP1P51693 650 aa25.72■■□□□ 1.71
HLA-C-208ENST00000487245 TXNDC8Q6A555 127 aa25.72■■□□□ 1.71
HLA-C-208ENST00000487245 FRA10AC1Q70Z53 315 aa25.72■■□□□ 1.71
HLA-C-208ENST00000487245 SNX20Q7Z614 316 aa25.72■■□□□ 1.71
HLA-C-208ENST00000487245 EIF2B4Q9UI10 523 aaKnown RBP25.72■■□□□ 1.71
HLA-C-208ENST00000487245 ZNF639Q9UID6 485 aa25.72■■□□□ 1.71
HLA-C-208ENST00000487245 ABHD14A-ACY1A0A1B0GW23 586 aa25.72■■□□□ 1.71
HLA-C-208ENST00000487245 ARNTLO00327 626 aa25.72■■□□□ 1.71
HLA-C-208ENST00000487245 TRMUO75648 421 aaKnown RBP25.72■■□□□ 1.71
HLA-C-208ENST00000487245 ITGALP20701 1170 aa25.72■■□□□ 1.71
HLA-C-208ENST00000487245 RPS6KA3P51812 740 aa25.72■■□□□ 1.71
HLA-C-208ENST00000487245 CYP51A1Q16850 503 aa25.72■■□□□ 1.71
HLA-C-208ENST00000487245 MPPE1Q53F39 396 aa25.72■■□□□ 1.71
HLA-C-208ENST00000487245 RABL3Q5HYI8 236 aa25.72■■□□□ 1.71
HLA-C-208ENST00000487245 HTR3DQ70Z44 454 aa25.72■■□□□ 1.71
HLA-C-208ENST00000487245 ARHGAP22Q7Z5H3 698 aa25.72■■□□□ 1.71
HLA-C-208ENST00000487245 SERPINA9Q86WD7 417 aa25.72■■□□□ 1.71
HLA-C-208ENST00000487245 ERI1Q8IV48 349 aaKnown RBP25.72■■□□□ 1.71
HLA-C-208ENST00000487245 DNAJB14Q8TBM8 379 aa25.72■■□□□ 1.71
HLA-C-208ENST00000487245 WFDC5Q8TCV5 224 aa25.72■■□□□ 1.71
HLA-C-208ENST00000487245 MRPS31Q92665 395 aaKnown RBP25.72■■□□□ 1.71
HLA-C-208ENST00000487245 EID2BQ96D98 161 aa25.72■■□□□ 1.71
HLA-C-208ENST00000487245 PLEKHG4BQ96PX9 1271 aa25.72■■□□□ 1.71
HLA-C-208ENST00000487245 KIAA1522Q9P206 1035 aaPredicted RBP25.72■■□□□ 1.71
HLA-C-208ENST00000487245 CXorf51AA0A1B0GTR3 108 aa25.71■■□□□ 1.71
HLA-C-208ENST00000487245 BAIAP3O94812 1187 aa25.71■■□□□ 1.71
HLA-C-208ENST00000487245 OR4F21O95013 312 aa25.71■■□□□ 1.71
HLA-C-208ENST00000487245 TRBC1P01850 177 aa25.71■■□□□ 1.71
HLA-C-208ENST00000487245 FBXO48Q5FWF7 155 aa25.71■■□□□ 1.71
HLA-C-208ENST00000487245 NANOGP8Q6NSW7 305 aa25.71■■□□□ 1.71
HLA-C-208ENST00000487245 HOMEZQ8IX15 550 aa25.71■■□□□ 1.71
HLA-C-208ENST00000487245 APCDD1Q8J025 514 aa25.71■■□□□ 1.71
HLA-C-208ENST00000487245 DIS3LQ8TF46 1054 aaKnown RBP25.71■■□□□ 1.71
HLA-C-208ENST00000487245 NANOGQ9H9S0 305 aa25.71■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms