RNA–Protein interactions for RNA: ENST00000486995.5

PTCD2-204, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 2

Gene PTCD2, Length 2,648 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-204ENST00000486995 PCDHB1Q9Y5F3 818 aa12.15□□□□□ -0.46
PTCD2-204ENST00000486995 TNPO3Q9Y5L0 923 aaKnown RBP12.15□□□□□ -0.46
PTCD2-204ENST00000486995 KANSL1LA0AUZ9 987 aa12.15□□□□□ -0.46
PTCD2-204ENST00000486995 K7ERQ8 282 aa12.15□□□□□ -0.46
PTCD2-204ENST00000486995 EI24O14681 340 aa12.15□□□□□ -0.46
PTCD2-204ENST00000486995 ANKRD28O15084 1053 aa12.15□□□□□ -0.46
PTCD2-204ENST00000486995 FFAR2O15552 330 aa12.15□□□□□ -0.46
PTCD2-204ENST00000486995 ABLIM3O94929 683 aa12.15□□□□□ -0.46
PTCD2-204ENST00000486995 BMP10O95393 424 aa12.15□□□□□ -0.46
PTCD2-204ENST00000486995 CNPP09543 421 aaKnown RBP12.15□□□□□ -0.46
PTCD2-204ENST00000486995 ARL1P40616 181 aaPredicted RBP12.15□□□□□ -0.46
PTCD2-204ENST00000486995 ALDH7A1P49419 539 aaKnown RBP12.15□□□□□ -0.46
PTCD2-204ENST00000486995 OR4D2P58180 307 aa12.15□□□□□ -0.46
PTCD2-204ENST00000486995 ABRAXAS2Q15018 415 aa12.15□□□□□ -0.46
PTCD2-204ENST00000486995 AASDHQ4L235 1098 aaPredicted RBP12.15□□□□□ -0.46
PTCD2-204ENST00000486995 RFTN2Q52LD8 501 aaPredicted RBP12.15□□□□□ -0.46
PTCD2-204ENST00000486995 CERS6Q6ZMG9 384 aa12.15□□□□□ -0.46
PTCD2-204ENST00000486995 ADAMTSL2Q86TH1 951 aa12.15□□□□□ -0.46
PTCD2-204ENST00000486995 SERPINA9Q86WD7 417 aa12.15□□□□□ -0.46
PTCD2-204ENST00000486995 FAM126BQ8IXS8 530 aa12.15□□□□□ -0.46
PTCD2-204ENST00000486995 RNF168Q8IYW5 571 aaPredicted RBP12.15□□□□□ -0.46
PTCD2-204ENST00000486995 TBC1D21Q8IYX1 336 aa12.15□□□□□ -0.46
PTCD2-204ENST00000486995 ZNF461Q8TAF7 563 aa12.15□□□□□ -0.46
PTCD2-204ENST00000486995 ALG14Q96F25 216 aa12.15□□□□□ -0.46
PTCD2-204ENST00000486995 NSUN3Q9H649 340 aaKnown RBP12.15□□□□□ -0.46
PTCD2-204ENST00000486995 DNMT3BQ9UBC3 853 aaKnown RBP12.15□□□□□ -0.46
PTCD2-204ENST00000486995 VPS51Q9UID3 782 aa12.15□□□□□ -0.46
PTCD2-204ENST00000486995 DYTNA2CJ06 578 aa12.14□□□□□ -0.47
PTCD2-204ENST00000486995 GRXCR2A6NFK2 248 aa12.14□□□□□ -0.47
PTCD2-204ENST00000486995 TRIM64CA6NLI5 447 aa12.14□□□□□ -0.47
PTCD2-204ENST00000486995 ARNTLO00327 626 aa12.14□□□□□ -0.47
PTCD2-204ENST00000486995 TAPBPO15533 448 aa12.14□□□□□ -0.47
PTCD2-204ENST00000486995 KATNA1O75449 491 aa12.14□□□□□ -0.47
PTCD2-204ENST00000486995 RSL1D1O76021 490 aaKnown RBP12.14□□□□□ -0.47
PTCD2-204ENST00000486995 PGLSO95336 258 aa12.14□□□□□ -0.47
PTCD2-204ENST00000486995 C7P10643 843 aa12.14□□□□□ -0.47
PTCD2-204ENST00000486995 TRAF3Q13114 568 aa12.14□□□□□ -0.47
PTCD2-204ENST00000486995 SELPLGQ14242 412 aa12.14□□□□□ -0.47
PTCD2-204ENST00000486995 KCTD21Q4G0X4 260 aa12.14□□□□□ -0.47
PTCD2-204ENST00000486995 TMEM259Q4ZIN3 620 aa12.14□□□□□ -0.47
PTCD2-204ENST00000486995 ARMC12Q5T9G4 340 aa12.14□□□□□ -0.47
PTCD2-204ENST00000486995 PTRHD1Q6GMV3 140 aaKnown RBP12.14□□□□□ -0.47
PTCD2-204ENST00000486995 CYP20A1Q6UW02 462 aa12.14□□□□□ -0.47
PTCD2-204ENST00000486995 FAM151BQ6UXP7 276 aa12.14□□□□□ -0.47
PTCD2-204ENST00000486995 RALGPS2Q86X27 583 aaPredicted RBP12.14□□□□□ -0.47
PTCD2-204ENST00000486995 PROSER1Q86XN7 944 aa12.14□□□□□ -0.47
PTCD2-204ENST00000486995 LRRC43Q8N309 656 aa12.14□□□□□ -0.47
PTCD2-204ENST00000486995 WFDC5Q8TCV5 224 aa12.14□□□□□ -0.47
PTCD2-204ENST00000486995 LKAAEAR1Q8TD35 194 aa12.14□□□□□ -0.47
PTCD2-204ENST00000486995 IPPKQ9H8X2 491 aa12.14□□□□□ -0.47
PTCD2-204ENST00000486995 ELOVL2Q9NXB9 296 aa12.14□□□□□ -0.47
PTCD2-204ENST00000486995 RSL24D1Q9UHA3 163 aaKnown RBP12.14□□□□□ -0.47
PTCD2-204ENST00000486995 PTBP2Q9UKA9 531 aaKnown RBP12.14□□□□□ -0.47
PTCD2-204ENST00000486995 CCL27Q9Y4X3 112 aa12.14□□□□□ -0.47
PTCD2-204ENST00000486995 PRSS21Q9Y6M0 314 aa12.14□□□□□ -0.47
PTCD2-204ENST00000486995 ZFC3H1O60293 1989 aaKnown RBP12.14□□□□□ -0.47
PTCD2-204ENST00000486995 TRIM64A6NGJ6 449 aa12.14□□□□□ -0.47
PTCD2-204ENST00000486995 GREM1O60565 184 aa12.14□□□□□ -0.47
PTCD2-204ENST00000486995 TRMUO75648 421 aaKnown RBP12.14□□□□□ -0.47
PTCD2-204ENST00000486995 PRAMEF1O95521 474 aa12.14□□□□□ -0.47
PTCD2-204ENST00000486995 CLIC3O95833 236 aa12.14□□□□□ -0.47
PTCD2-204ENST00000486995 MT-ND1P03886 318 aa12.14□□□□□ -0.47
PTCD2-204ENST00000486995 ITGB6P18564 788 aa12.14□□□□□ -0.47
PTCD2-204ENST00000486995 CSKP41240 450 aa12.14□□□□□ -0.47
PTCD2-204ENST00000486995 ZXDBP98169 803 aa12.14□□□□□ -0.47
PTCD2-204ENST00000486995 AP5B1Q2VPB7 878 aa12.14□□□□□ -0.47
PTCD2-204ENST00000486995 PYCR3Q53H96 274 aa12.14□□□□□ -0.47
PTCD2-204ENST00000486995 TTC33Q6PID6 262 aaPredicted RBP12.14□□□□□ -0.47
PTCD2-204ENST00000486995 TMEM150AQ86TG1 271 aa12.14□□□□□ -0.47
PTCD2-204ENST00000486995 ZNF786Q8N393 782 aa12.14□□□□□ -0.47
PTCD2-204ENST00000486995 PDPRQ8NCN5 879 aa12.14□□□□□ -0.47
PTCD2-204ENST00000486995 OR6K2Q8NGY2 324 aa12.14□□□□□ -0.47
PTCD2-204ENST00000486995 CD99L2Q8TCZ2 262 aa12.14□□□□□ -0.47
PTCD2-204ENST00000486995 RAET1EQ8TD07 263 aa12.14□□□□□ -0.47
PTCD2-204ENST00000486995 MYO19Q96H55 970 aa12.14□□□□□ -0.47
PTCD2-204ENST00000486995 PPM1MQ96MI6 270 aa12.14□□□□□ -0.47
PTCD2-204ENST00000486995 SLC22A12Q96S37 553 aa12.14□□□□□ -0.47
PTCD2-204ENST00000486995 SEPHS2Q99611 448 aa12.14□□□□□ -0.47
PTCD2-204ENST00000486995 CLPBQ9H078 707 aa12.14□□□□□ -0.47
PTCD2-204ENST00000486995 C8orf4Q9NR00 106 aa12.14□□□□□ -0.47
PTCD2-204ENST00000486995 ZNF639Q9UID6 485 aa12.14□□□□□ -0.47
PTCD2-204ENST00000486995 ZMYM5Q9UJ78 669 aa12.14□□□□□ -0.47
PTCD2-204ENST00000486995 YIPF1Q9Y548 306 aa12.14□□□□□ -0.47
PTCD2-204ENST00000486995 RAD51BO15315 384 aa12.13□□□□□ -0.47
PTCD2-204ENST00000486995 GUCA1CO95843 209 aa12.13□□□□□ -0.47
PTCD2-204ENST00000486995 GLUD1P00367 558 aa12.13□□□□□ -0.47
PTCD2-204ENST00000486995 OTCP00480 354 aa12.13□□□□□ -0.47
PTCD2-204ENST00000486995 MBL2P11226 248 aaPredicted RBP12.13□□□□□ -0.47
PTCD2-204ENST00000486995 ZNF7P17097 686 aaPredicted RBP12.13□□□□□ -0.47
PTCD2-204ENST00000486995 RPS3P23396 243 aaKnown RBP eCLIP12.13□□□□□ -0.47
PTCD2-204ENST00000486995 HSPA7P48741 367 aa12.13□□□□□ -0.47
PTCD2-204ENST00000486995 CDK9P50750 372 aaKnown RBP12.13□□□□□ -0.47
PTCD2-204ENST00000486995 DGKQP52824 942 aa12.13□□□□□ -0.47
PTCD2-204ENST00000486995 SMAD3P84022 425 aaKnown RBP12.13□□□□□ -0.47
PTCD2-204ENST00000486995 KIAA0040Q15053 153 aa12.13□□□□□ -0.47
PTCD2-204ENST00000486995 NR6A1Q15406 480 aa12.13□□□□□ -0.47
PTCD2-204ENST00000486995 TAF12Q16514 161 aa12.13□□□□□ -0.47
PTCD2-204ENST00000486995 PLA2G4EQ3MJ16 856 aa12.13□□□□□ -0.47
PTCD2-204ENST00000486995 GLYATQ6IB77 296 aa12.13□□□□□ -0.47
PTCD2-204ENST00000486995 KIAA1841Q6NSI8 718 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms