RNA–Protein interactions for RNA: ENST00000486204.5

SSR4-211, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 3

Gene SSR4, Length 658 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-211ENST00000486204 ZDHHC3Q9NYG2 299 aa12.7□□□□□ -0.38
SSR4-211ENST00000486204 SIRPGQ9P1W8 387 aa12.7□□□□□ -0.38
SSR4-211ENST00000486204 GULP1Q9UBP9 304 aa12.7□□□□□ -0.38
SSR4-211ENST00000486204 FAM187AA6NFU0 413 aa12.69□□□□□ -0.38
SSR4-211ENST00000486204 OR2AG2A6NM03 316 aa12.69□□□□□ -0.38
SSR4-211ENST00000486204 KMOO15229 486 aa12.69□□□□□ -0.38
SSR4-211ENST00000486204 SNRNP200O75643 2136 aaKnown RBP12.69□□□□□ -0.38
SSR4-211ENST00000486204 ZNF7P17097 686 aaPredicted RBP12.69□□□□□ -0.38
SSR4-211ENST00000486204 AKT1P31749 480 aa12.69□□□□□ -0.38
SSR4-211ENST00000486204 GTF2H3Q13889 308 aa12.69□□□□□ -0.38
SSR4-211ENST00000486204 HLTFQ14527 1009 aaKnown RBP eCLIP12.69□□□□□ -0.38
SSR4-211ENST00000486204 MORF4L2Q15014 288 aa12.69□□□□□ -0.38
SSR4-211ENST00000486204 NR0B2Q15466 257 aa12.69□□□□□ -0.38
SSR4-211ENST00000486204 WHAMMP3Q1A5X7 153 aa12.69□□□□□ -0.38
SSR4-211ENST00000486204 LINC00303Q3SY05 128 aa12.69□□□□□ -0.38
SSR4-211ENST00000486204 BCL7AQ4VC05 210 aa12.69□□□□□ -0.38
SSR4-211ENST00000486204 MSS51Q4VC12 460 aa12.69□□□□□ -0.38
SSR4-211ENST00000486204 C14orf28Q4W4Y0 310 aa12.69□□□□□ -0.38
SSR4-211ENST00000486204 PERM1Q5SV97 790 aa12.69□□□□□ -0.38
SSR4-211ENST00000486204 CES3Q6UWW8 571 aa12.69□□□□□ -0.38
SSR4-211ENST00000486204 PCGF5Q86SE9 256 aa12.69□□□□□ -0.38
SSR4-211ENST00000486204 TRAPPC5Q8IUR0 188 aa12.69□□□□□ -0.38
SSR4-211ENST00000486204 ZDHHC1Q8WTX9 485 aa12.69□□□□□ -0.38
SSR4-211ENST00000486204 PATE1Q8WXA2 126 aa12.69□□□□□ -0.38
SSR4-211ENST00000486204 SCG3Q8WXD2 468 aaKnown RBP12.69□□□□□ -0.38
SSR4-211ENST00000486204 SNF8Q96H20 258 aa12.69□□□□□ -0.38
SSR4-211ENST00000486204 COPS8Q99627 209 aa12.69□□□□□ -0.38
SSR4-211ENST00000486204 DPEP2Q9H4A9 486 aa12.69□□□□□ -0.38
SSR4-211ENST00000486204 NCKIPSDQ9NZQ3 722 aa12.69□□□□□ -0.38
SSR4-211ENST00000486204 MARCH4Q9P2E8 410 aaPredicted RBP12.69□□□□□ -0.38
SSR4-211ENST00000486204 TBC1D29Q9UFV1 150 aa12.69□□□□□ -0.38
SSR4-211ENST00000486204 BSNQ9UPA5 3926 aa12.69□□□□□ -0.38
SSR4-211ENST00000486204 ZCWPW2A0A1B0GU75 182 aa12.68□□□□□ -0.38
SSR4-211ENST00000486204 FAM237BA0A1B0GVD1 139 aa12.68□□□□□ -0.38
SSR4-211ENST00000486204 SDR42E2A6NKP2 422 aa12.68□□□□□ -0.38
SSR4-211ENST00000486204 EFCAB8A8MWE9 144 aa12.68□□□□□ -0.38
SSR4-211ENST00000486204 CASC3O15234 703 aaKnown RBP12.68□□□□□ -0.38
SSR4-211ENST00000486204 CSO75390 466 aaKnown RBP12.68□□□□□ -0.38
SSR4-211ENST00000486204 BANF1O75531 89 aa12.68□□□□□ -0.38
SSR4-211ENST00000486204 GP1BAP07359 652 aa12.68□□□□□ -0.38
SSR4-211ENST00000486204 MSH3P20585 1137 aa12.68□□□□□ -0.38
SSR4-211ENST00000486204 RBMS1P29558 406 aaKnown RBP12.68□□□□□ -0.38
SSR4-211ENST00000486204 ARCN1P48444 511 aaKnown RBP12.68□□□□□ -0.38
SSR4-211ENST00000486204 PRLHRP49683 370 aa12.68□□□□□ -0.38
SSR4-211ENST00000486204 ITGA8P53708 1063 aa12.68□□□□□ -0.38
SSR4-211ENST00000486204 PRAMEP78395 509 aa12.68□□□□□ -0.38
SSR4-211ENST00000486204 DMPKQ09013 629 aa12.68□□□□□ -0.38
SSR4-211ENST00000486204 ITIH4Q14624 930 aa12.68□□□□□ -0.38
SSR4-211ENST00000486204 INSCQ1MX18 579 aa12.68□□□□□ -0.38
SSR4-211ENST00000486204 ZNF658BQ4V348 819 aaPredicted RBP12.68□□□□□ -0.38
SSR4-211ENST00000486204 FNBP1LQ5T0N5 605 aa12.68□□□□□ -0.38
SSR4-211ENST00000486204 KIAA0930Q6ICG6 404 aaPredicted RBP12.68□□□□□ -0.38
SSR4-211ENST00000486204 TMEM220Q6QAJ8 160 aa12.68□□□□□ -0.38
SSR4-211ENST00000486204 PACS1Q6VY07 963 aa12.68□□□□□ -0.38
SSR4-211ENST00000486204 DET1Q7L5Y6 550 aa12.68□□□□□ -0.38
SSR4-211ENST00000486204 TMEM135Q86UB9 458 aa12.68□□□□□ -0.38
SSR4-211ENST00000486204 BEND7Q8N7W2 519 aaPredicted RBP12.68□□□□□ -0.38
SSR4-211ENST00000486204 OR4L1Q8NH43 312 aa12.68□□□□□ -0.38
SSR4-211ENST00000486204 SGF29Q96ES7 293 aa12.68□□□□□ -0.38
SSR4-211ENST00000486204 ZNF514Q96K75 400 aaPredicted RBP12.68□□□□□ -0.38
SSR4-211ENST00000486204 PWWP2AQ96N64 755 aa12.68□□□□□ -0.38
SSR4-211ENST00000486204 TTC25Q96NG3 672 aa12.68□□□□□ -0.38
SSR4-211ENST00000486204 ARHGAP9Q9BRR9 750 aa12.68□□□□□ -0.38
SSR4-211ENST00000486204 WDR83Q9BRX9 315 aaKnown RBP12.68□□□□□ -0.38
SSR4-211ENST00000486204 ERP44Q9BS26 406 aa12.68□□□□□ -0.38
SSR4-211ENST00000486204 TRIM31Q9BZY9 425 aa12.68□□□□□ -0.38
SSR4-211ENST00000486204 KLC4Q9NSK0 619 aa12.68□□□□□ -0.38
SSR4-211ENST00000486204 GRHL1Q9NZI5 618 aa12.68□□□□□ -0.38
SSR4-211ENST00000486204 RABGEF1Q9UJ41 708 aa12.68□□□□□ -0.38
SSR4-211ENST00000486204 PADI4Q9UM07 663 aa12.68□□□□□ -0.38
SSR4-211ENST00000486204 SNX24Q9Y343 169 aa12.68□□□□□ -0.38
SSR4-211ENST00000486204 DOPEY2Q9Y3R5 2298 aa12.68□□□□□ -0.38
SSR4-211ENST00000486204 NBPF19A0A087WUL8 3843 aa12.68□□□□□ -0.38
SSR4-211ENST00000486204 ANKRD12Q6UB98 2062 aa12.67□□□□□ -0.38
SSR4-211ENST00000486204 SMAPO00193 183 aa12.67□□□□□ -0.38
SSR4-211ENST00000486204 OPA1O60313 960 aa12.67□□□□□ -0.38
SSR4-211ENST00000486204 F3P13726 295 aa12.67□□□□□ -0.38
SSR4-211ENST00000486204 ATP1B2P14415 290 aaPredicted RBP12.67□□□□□ -0.38
SSR4-211ENST00000486204 BRAFP15056 766 aa12.67□□□□□ -0.38
SSR4-211ENST00000486204 ITGB6P18564 788 aa12.67□□□□□ -0.38
SSR4-211ENST00000486204 DUSP3P51452 185 aaPredicted RBP12.67□□□□□ -0.38
SSR4-211ENST00000486204 MAZP56270 477 aaKnown RBP12.67□□□□□ -0.38
SSR4-211ENST00000486204 DHX9Q08211 1270 aaKnown RBP12.67□□□□□ -0.38
SSR4-211ENST00000486204 CBLBQ13191 982 aa12.67□□□□□ -0.38
SSR4-211ENST00000486204 DUPD1Q68J44 220 aa12.67□□□□□ -0.38
SSR4-211ENST00000486204 FAM83HQ6ZRV2 1179 aaPredicted RBP12.67□□□□□ -0.38
SSR4-211ENST00000486204 TAS2R42Q7RTR8 314 aa12.67□□□□□ -0.38
SSR4-211ENST00000486204 EFL1Q7Z2Z2 1120 aaKnown RBP12.67□□□□□ -0.38
SSR4-211ENST00000486204 MAATS1Q7Z4T9 603 aa12.67□□□□□ -0.38
SSR4-211ENST00000486204 ZNF438Q7Z4V0 828 aa12.67□□□□□ -0.38
SSR4-211ENST00000486204 SFRP1Q8N474 314 aa12.67□□□□□ -0.38
SSR4-211ENST00000486204 CLDN19Q8N6F1 224 aa12.67□□□□□ -0.38
SSR4-211ENST00000486204 OR6P1Q8NGX9 317 aa12.67□□□□□ -0.38
SSR4-211ENST00000486204 KIF18AQ8NI77 898 aa12.67□□□□□ -0.38
SSR4-211ENST00000486204 IFI44Q8TCB0 444 aa12.67□□□□□ -0.38
SSR4-211ENST00000486204 HEXDCQ8WVB3 486 aa12.67□□□□□ -0.38
SSR4-211ENST00000486204 GLMNQ92990 594 aa12.67□□□□□ -0.38
SSR4-211ENST00000486204 ZNF669Q96BR6 464 aaPredicted RBP12.67□□□□□ -0.38
SSR4-211ENST00000486204 LINC00615Q96LM1 132 aaPredicted RBP12.67□□□□□ -0.38
SSR4-211ENST00000486204 PLAC1Q9HBJ0 212 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms