RNA–Protein interactions for RNA: ENST00000486023.1

COL6A1-204, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 2

Gene COL6A1, Length 968 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-204ENST00000486023 NLE1Q9NVX2 485 aaPredicted RBP17.3■□□□□ 0.36
COL6A1-204ENST00000486023 OGFRQ9NZT2 677 aa17.3■□□□□ 0.36
COL6A1-204ENST00000486023 BPTFQ12830 3046 aa17.3■□□□□ 0.36
COL6A1-204ENST00000486023 TEX51A0A1B0GUA7 166 aa17.29■□□□□ 0.36
COL6A1-204ENST00000486023 OR51F1A6NGY5 319 aa17.29■□□□□ 0.36
COL6A1-204ENST00000486023 FDFT1P37268 417 aa17.29■□□□□ 0.36
COL6A1-204ENST00000486023 FOXM1Q08050 763 aa17.29■□□□□ 0.36
COL6A1-204ENST00000486023 DMPKQ09013 629 aa17.29■□□□□ 0.36
COL6A1-204ENST00000486023 CDH17Q12864 832 aa17.29■□□□□ 0.36
COL6A1-204ENST00000486023 METRNLQ641Q3 311 aa17.29■□□□□ 0.36
COL6A1-204ENST00000486023 DUS1LQ6P1R4 473 aaKnown RBP17.29■□□□□ 0.36
COL6A1-204ENST00000486023 ARHGAP22Q7Z5H3 698 aa17.29■□□□□ 0.36
COL6A1-204ENST00000486023 KLHDC8BQ8IXV7 354 aa17.29■□□□□ 0.36
COL6A1-204ENST00000486023 LILRA3Q8N6C8 439 aaPredicted RBP17.29■□□□□ 0.36
COL6A1-204ENST00000486023 GLIS1Q8NBF1 620 aa17.29■□□□□ 0.36
COL6A1-204ENST00000486023 SPDYE1Q8NFV5 336 aaPredicted RBP17.29■□□□□ 0.36
COL6A1-204ENST00000486023 TRIM58Q8NG06 486 aa17.29■□□□□ 0.36
COL6A1-204ENST00000486023 OR2L2Q8NH16 312 aa17.29■□□□□ 0.36
COL6A1-204ENST00000486023 STYXQ8WUJ0 223 aa17.29■□□□□ 0.36
COL6A1-204ENST00000486023 CDKN2AIPNLQ96HQ2 116 aa17.29■□□□□ 0.36
COL6A1-204ENST00000486023 ELMO2Q96JJ3 720 aa17.29■□□□□ 0.36
COL6A1-204ENST00000486023 ASPSCR1Q9BZE9 553 aa17.29■□□□□ 0.36
COL6A1-204ENST00000486023 EPB41L1Q9H4G0 881 aa17.29■□□□□ 0.36
COL6A1-204ENST00000486023 UCK1Q9HA47 277 aa17.29■□□□□ 0.36
COL6A1-204ENST00000486023 ZDHHC3Q9NYG2 299 aa17.29■□□□□ 0.36
COL6A1-204ENST00000486023 SMARCAL1Q9NZC9 954 aa17.29■□□□□ 0.36
COL6A1-204ENST00000486023 PDP2Q9P2J9 529 aa17.29■□□□□ 0.36
COL6A1-204ENST00000486023 LOC400499M0QZD8 3231 aa17.29■□□□□ 0.36
COL6A1-204ENST00000486023 STMND1H3BQB6 276 aa17.28■□□□□ 0.36
COL6A1-204ENST00000486023 EFSO43281 561 aa17.28■□□□□ 0.36
COL6A1-204ENST00000486023 KIF1CO43896 1103 aaKnown RBP17.28■□□□□ 0.36
COL6A1-204ENST00000486023 PRB1P04280 392 aa17.28■□□□□ 0.36
COL6A1-204ENST00000486023 APRTP07741 180 aa17.28■□□□□ 0.36
COL6A1-204ENST00000486023 SLC35G4P0C7Q5 338 aa17.28■□□□□ 0.36
COL6A1-204ENST00000486023 KCNJ1P48048 391 aa17.28■□□□□ 0.36
COL6A1-204ENST00000486023 CCNG2Q16589 344 aa17.28■□□□□ 0.36
COL6A1-204ENST00000486023 SKIDA1Q1XH10 827 aa17.28■□□□□ 0.36
COL6A1-204ENST00000486023 GPR33Q49SQ1 333 aa17.28■□□□□ 0.36
COL6A1-204ENST00000486023 RBM12BQ8IXT5 1001 aaKnown RBP17.28■□□□□ 0.36
COL6A1-204ENST00000486023 CLDN19Q8N6F1 224 aa17.28■□□□□ 0.36
COL6A1-204ENST00000486023 IL22RA1Q8N6P7 574 aa17.28■□□□□ 0.36
COL6A1-204ENST00000486023 UBE2Q2Q8WVN8 375 aa17.28■□□□□ 0.36
COL6A1-204ENST00000486023 RTP4Q96DX8 246 aa17.28■□□□□ 0.36
COL6A1-204ENST00000486023 C9orf72Q96LT7 481 aa17.28■□□□□ 0.36
COL6A1-204ENST00000486023 APMAPQ9HDC9 416 aa17.28■□□□□ 0.36
COL6A1-204ENST00000486023 PAK5Q9P286 719 aa17.28■□□□□ 0.36
COL6A1-204ENST00000486023 ACSL5Q9ULC5 683 aa17.28■□□□□ 0.36
COL6A1-204ENST00000486023 B4E171 279 aa17.27■□□□□ 0.36
COL6A1-204ENST00000486023 K7ENP7 123 aa17.27■□□□□ 0.36
COL6A1-204ENST00000486023 POLR1CO15160 346 aaPredicted RBP17.27■□□□□ 0.36
COL6A1-204ENST00000486023 SGTAO43765 313 aa17.27■□□□□ 0.36
COL6A1-204ENST00000486023 MTHFD1P11586 935 aaKnown RBP17.27■□□□□ 0.36
COL6A1-204ENST00000486023 MSNP26038 577 aaKnown RBP17.27■□□□□ 0.36
COL6A1-204ENST00000486023 ACRV1P26436 265 aa17.27■□□□□ 0.36
COL6A1-204ENST00000486023 RPL22P35268 128 aaKnown RBP17.27■□□□□ 0.36
COL6A1-204ENST00000486023 TSPAN7P41732 249 aa17.27■□□□□ 0.36
COL6A1-204ENST00000486023 ARSDP51689 593 aa17.27■□□□□ 0.36
COL6A1-204ENST00000486023 MC2RQ01718 297 aa17.27■□□□□ 0.36
COL6A1-204ENST00000486023 CACNG1Q06432 222 aa17.27■□□□□ 0.36
COL6A1-204ENST00000486023 BCL7AQ4VC05 210 aa17.27■□□□□ 0.36
COL6A1-204ENST00000486023 CACHD1Q5VU97 1274 aa17.27■□□□□ 0.36
COL6A1-204ENST00000486023 INO80CQ6PI98 192 aaPredicted RBP17.27■□□□□ 0.36
COL6A1-204ENST00000486023 PIANPQ8IYJ0 282 aa17.27■□□□□ 0.36
COL6A1-204ENST00000486023 SLC39A7Q92504 469 aa17.27■□□□□ 0.36
COL6A1-204ENST00000486023 TLR10Q9BXR5 811 aa17.27■□□□□ 0.36
COL6A1-204ENST00000486023 GRPEL1Q9HAV7 217 aa17.27■□□□□ 0.36
COL6A1-204ENST00000486023 SLC2A6Q9UGQ3 507 aa17.27■□□□□ 0.36
COL6A1-204ENST00000486023 ACSL6Q9UKU0 697 aa17.27■□□□□ 0.36
COL6A1-204ENST00000486023 PTPRQQ9UMZ3 2332 aa17.27■□□□□ 0.35
COL6A1-204ENST00000486023 CCDC162PA2VCL2 907 aa17.26■□□□□ 0.35
COL6A1-204ENST00000486023 AGAP14A8MT82 685 aa17.26■□□□□ 0.35
COL6A1-204ENST00000486023 CD82P27701 267 aa17.26■□□□□ 0.35
COL6A1-204ENST00000486023 CAPZBP47756 277 aa17.26■□□□□ 0.35
COL6A1-204ENST00000486023 ARCN1P48444 511 aaKnown RBP17.26■□□□□ 0.35
COL6A1-204ENST00000486023 ATP1A2P50993 1020 aa17.26■□□□□ 0.35
COL6A1-204ENST00000486023 SESN2P58004 480 aaPredicted RBP17.26■□□□□ 0.35
COL6A1-204ENST00000486023 RAB15P59190 212 aa17.26■□□□□ 0.35
COL6A1-204ENST00000486023 PPP1CAP62136 330 aa17.26■□□□□ 0.35
COL6A1-204ENST00000486023 SH3BP2P78314 561 aa17.26■□□□□ 0.35
COL6A1-204ENST00000486023 CYP4F2P78329 520 aa17.26■□□□□ 0.35
COL6A1-204ENST00000486023 BASP1P80723 227 aaKnown RBP17.26■□□□□ 0.35
COL6A1-204ENST00000486023 BRD3Q15059 726 aa17.26■□□□□ 0.35
COL6A1-204ENST00000486023 SIX1Q15475 284 aaPredicted RBP17.26■□□□□ 0.35
COL6A1-204ENST00000486023 TRIP13Q15645 432 aaPredicted RBP17.26■□□□□ 0.35
COL6A1-204ENST00000486023 DBN1Q16643 649 aa17.26■□□□□ 0.35
COL6A1-204ENST00000486023 CEACAM20Q6UY09 585 aa17.26■□□□□ 0.35
COL6A1-204ENST00000486023 ZNF662Q6ZS27 426 aa17.26■□□□□ 0.35
COL6A1-204ENST00000486023 BMPERQ8N8U9 685 aa17.26■□□□□ 0.35
COL6A1-204ENST00000486023 OR6P1Q8NGX9 317 aa17.26■□□□□ 0.35
COL6A1-204ENST00000486023 HEXDCQ8WVB3 486 aa17.26■□□□□ 0.35
COL6A1-204ENST00000486023 MAIP1Q8WWC4 291 aa17.26■□□□□ 0.35
COL6A1-204ENST00000486023 HDAC10Q969S8 669 aa17.26■□□□□ 0.35
COL6A1-204ENST00000486023 ZDHHC12Q96GR4 267 aa17.26■□□□□ 0.35
COL6A1-204ENST00000486023 FERD3LQ96RJ6 166 aa17.26■□□□□ 0.35
COL6A1-204ENST00000486023 CCM2Q9BSQ5 444 aa17.26■□□□□ 0.35
COL6A1-204ENST00000486023 DDA1Q9BW61 102 aa17.26■□□□□ 0.35
COL6A1-204ENST00000486023 PCDHGA3Q9Y5H0 932 aa17.26■□□□□ 0.35
COL6A1-204ENST00000486023 MGAQ8IWI9 3026 aa17.26■□□□□ 0.35
COL6A1-204ENST00000486023 SCN8AQ9UQD0 1980 aa17.26■□□□□ 0.35
COL6A1-204ENST00000486023 MN1Q10571 1320 aaPredicted RBP17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms