RNA–Protein interactions for RNA: ENST00000485618.1

SF3A1-208, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 593 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-208ENST00000485618 NUDT21O43809 227 aaKnown RBP8.13□□□□□ -1.11
SF3A1-208ENST00000485618 RPN2P04844 631 aa8.13□□□□□ -1.11
SF3A1-208ENST00000485618 RHOXF2BP0C7M4 288 aa8.13□□□□□ -1.11
SF3A1-208ENST00000485618 CKMT1AP12532 417 aa8.13□□□□□ -1.11
SF3A1-208ENST00000485618 GLB1P16278 677 aa8.13□□□□□ -1.11
SF3A1-208ENST00000485618 CHRM3P20309 590 aa8.13□□□□□ -1.11
SF3A1-208ENST00000485618 RPS3P23396 243 aaKnown RBP eCLIP8.13□□□□□ -1.117e-10■■■■□ 20.3
SF3A1-208ENST00000485618 STX2P32856 288 aa8.13□□□□□ -1.11
SF3A1-208ENST00000485618 MAPK9P45984 424 aa8.13□□□□□ -1.11
SF3A1-208ENST00000485618 GPR3P46089 330 aa8.13□□□□□ -1.11
SF3A1-208ENST00000485618 ARCN1P48444 511 aaKnown RBP8.13□□□□□ -1.11
SF3A1-208ENST00000485618 PRLHRP49683 370 aa8.13□□□□□ -1.11
SF3A1-208ENST00000485618 DMPKQ09013 629 aa8.13□□□□□ -1.11
SF3A1-208ENST00000485618 HSP90AA5PQ58FG0 334 aa8.13□□□□□ -1.11
SF3A1-208ENST00000485618 TPRG1LQ5T0D9 272 aa8.13□□□□□ -1.11
SF3A1-208ENST00000485618 METRNLQ641Q3 311 aa8.13□□□□□ -1.11
SF3A1-208ENST00000485618 TTC23LQ6PF05 361 aa8.13□□□□□ -1.11
SF3A1-208ENST00000485618 OGFOD3Q6PK18 319 aa8.13□□□□□ -1.11
SF3A1-208ENST00000485618 CES3Q6UWW8 571 aa8.13□□□□□ -1.11
SF3A1-208ENST00000485618 OTOAQ7RTW8 1153 aa8.13□□□□□ -1.11
SF3A1-208ENST00000485618 KCNMB4Q86W47 210 aa8.13□□□□□ -1.11
SF3A1-208ENST00000485618 ANKMY2Q8IV38 441 aa8.13□□□□□ -1.11
SF3A1-208ENST00000485618 PIANPQ8IYJ0 282 aa8.13□□□□□ -1.11
SF3A1-208ENST00000485618 CFAP206Q8IYR0 622 aa8.13□□□□□ -1.11
SF3A1-208ENST00000485618 PIAS4Q8N2W9 510 aaPredicted RBP8.13□□□□□ -1.11
SF3A1-208ENST00000485618 CHCHD4Q8N4Q1 142 aa8.13□□□□□ -1.11
SF3A1-208ENST00000485618 ZFPM2Q8WW38 1151 aa8.13□□□□□ -1.11
SF3A1-208ENST00000485618 TMEM159Q96B96 161 aa8.13□□□□□ -1.11
SF3A1-208ENST00000485618 CXorf40BQ96DE9 158 aa8.13□□□□□ -1.11
SF3A1-208ENST00000485618 CERS2Q96G23 380 aa8.13□□□□□ -1.11
SF3A1-208ENST00000485618 FOPNLQ96NB1 174 aa8.13□□□□□ -1.11
SF3A1-208ENST00000485618 RHOXF2Q9BQY4 288 aa8.13□□□□□ -1.11
SF3A1-208ENST00000485618 CCDC77Q9BR77 488 aa8.13□□□□□ -1.11
SF3A1-208ENST00000485618 BOCQ9BWV1 1114 aa8.13□□□□□ -1.11
SF3A1-208ENST00000485618 EPB41L1Q9H4G0 881 aa8.13□□□□□ -1.11
SF3A1-208ENST00000485618 SPATS2LQ9NUQ6 558 aaKnown RBP8.13□□□□□ -1.11
SF3A1-208ENST00000485618 UCKL1Q9NWZ5 548 aa8.13□□□□□ -1.11
SF3A1-208ENST00000485618 GRHL1Q9NZI5 618 aa8.13□□□□□ -1.11
SF3A1-208ENST00000485618 KLHL42Q9P2K6 505 aa8.13□□□□□ -1.11
SF3A1-208ENST00000485618 FBXO5Q9UKT4 447 aa8.13□□□□□ -1.11
SF3A1-208ENST00000485618 PADI4Q9UM07 663 aa8.13□□□□□ -1.11
SF3A1-208ENST00000485618 KCNK6Q9Y257 313 aa8.13□□□□□ -1.11
SF3A1-208ENST00000485618 DNAJC16Q9Y2G8 782 aa8.13□□□□□ -1.11
SF3A1-208ENST00000485618 IKBKGQ9Y6K9 419 aa8.13□□□□□ -1.11
SF3A1-208ENST00000485618 PCDH15Q96QU1 1955 aa8.13□□□□□ -1.11
SF3A1-208ENST00000485618 BPTFQ12830 3046 aa8.13□□□□□ -1.11
SF3A1-208ENST00000485618 ZFYVE26Q68DK2 2539 aa8.12□□□□□ -1.11
SF3A1-208ENST00000485618 ESYT3A0FGR9 886 aa8.12□□□□□ -1.11
SF3A1-208ENST00000485618 CPED1A4D0V7 1026 aa8.12□□□□□ -1.11
SF3A1-208ENST00000485618 PABPN1LA6NDY0 278 aaKnown RBP8.12□□□□□ -1.11
SF3A1-208ENST00000485618 OR51F1A6NGY5 319 aa8.12□□□□□ -1.11
SF3A1-208ENST00000485618 B4DGG1 531 aa8.12□□□□□ -1.11
SF3A1-208ENST00000485618 TRIM38O00635 465 aa8.12□□□□□ -1.11
SF3A1-208ENST00000485618 ZIC2O95409 532 aaPredicted RBP8.12□□□□□ -1.11
SF3A1-208ENST00000485618 VIPP01282 170 aa8.12□□□□□ -1.11
SF3A1-208ENST00000485618 F3P13726 295 aa8.12□□□□□ -1.11
SF3A1-208ENST00000485618 PNLIPP16233 465 aa8.12□□□□□ -1.11
SF3A1-208ENST00000485618 ACP1P24666 158 aa8.12□□□□□ -1.11
SF3A1-208ENST00000485618 FMO4P31512 558 aa8.12□□□□□ -1.11
SF3A1-208ENST00000485618 CD151P48509 253 aa8.12□□□□□ -1.11
SF3A1-208ENST00000485618 PPM1FP49593 454 aaPredicted RBP8.12□□□□□ -1.11
SF3A1-208ENST00000485618 CDKN1CP49918 316 aaPredicted RBP8.12□□□□□ -1.11
SF3A1-208ENST00000485618 SLC12A2P55011 1212 aa8.12□□□□□ -1.11
SF3A1-208ENST00000485618 EIF3BP55884 814 aaKnown RBP8.12□□□□□ -1.11
SF3A1-208ENST00000485618 NAB1Q13506 487 aa8.12□□□□□ -1.11
SF3A1-208ENST00000485618 CLPPQ16740 277 aaPredicted RBP8.12□□□□□ -1.11
SF3A1-208ENST00000485618 TYSND1Q2T9J0 566 aa8.12□□□□□ -1.11
SF3A1-208ENST00000485618 MSS51Q4VC12 460 aa8.12□□□□□ -1.11
SF3A1-208ENST00000485618 C14orf28Q4W4Y0 310 aa8.12□□□□□ -1.11
SF3A1-208ENST00000485618 HP1BP3Q5SSJ5 553 aaPredicted RBP8.12□□□□□ -1.11
SF3A1-208ENST00000485618 TEX35Q5T0J7 233 aa8.12□□□□□ -1.11
SF3A1-208ENST00000485618 ZNF648Q5T619 568 aaPredicted RBP8.12□□□□□ -1.11
SF3A1-208ENST00000485618 STEAP4Q687X5 459 aa8.12□□□□□ -1.11
SF3A1-208ENST00000485618 LRRC8EQ6NSJ5 796 aa8.12□□□□□ -1.11
SF3A1-208ENST00000485618 KLHL35Q6PF15 583 aa8.12□□□□□ -1.11
SF3A1-208ENST00000485618 IYDQ6PHW0 289 aa8.12□□□□□ -1.11
SF3A1-208ENST00000485618 ABRAXAS1Q6UWZ7 409 aa8.12□□□□□ -1.11
SF3A1-208ENST00000485618 KDM7AQ6ZMT4 941 aa8.12□□□□□ -1.11
SF3A1-208ENST00000485618 UNC5AQ6ZN44 842 aa8.12□□□□□ -1.11
SF3A1-208ENST00000485618 TAOK1Q7L7X3 1001 aa8.12□□□□□ -1.11
SF3A1-208ENST00000485618 KANSL1Q7Z3B3 1105 aa8.12□□□□□ -1.11
SF3A1-208ENST00000485618 GALNT7Q86SF2 657 aa8.12□□□□□ -1.11
SF3A1-208ENST00000485618 SLC26A11Q86WA9 606 aa8.12□□□□□ -1.11
SF3A1-208ENST00000485618 PROSER1Q86XN7 944 aa8.12□□□□□ -1.11
SF3A1-208ENST00000485618 RELL1Q8IUW5 271 aa8.12□□□□□ -1.11
SF3A1-208ENST00000485618 ZNF547Q8IVP9 402 aa8.12□□□□□ -1.11
SF3A1-208ENST00000485618 RAB42Q8N4Z0 105 aa8.12□□□□□ -1.11
SF3A1-208ENST00000485618 CLDN19Q8N6F1 224 aa8.12□□□□□ -1.11
SF3A1-208ENST00000485618 ELMO1Q92556 727 aa8.12□□□□□ -1.11
SF3A1-208ENST00000485618 VPS39Q96JC1 886 aa8.12□□□□□ -1.11
SF3A1-208ENST00000485618 APOLD1Q96LR9 279 aa8.12□□□□□ -1.11
SF3A1-208ENST00000485618 CAMK1GQ96NX5 476 aa8.12□□□□□ -1.11
SF3A1-208ENST00000485618 FCRL3Q96P31 734 aaPredicted RBP8.12□□□□□ -1.11
SF3A1-208ENST00000485618 DPYSL5Q9BPU6 564 aa8.12□□□□□ -1.11
SF3A1-208ENST00000485618 TCEAL2Q9H3H9 227 aaPredicted RBP8.12□□□□□ -1.11
SF3A1-208ENST00000485618 IARS2Q9NSE4 1012 aaKnown RBP8.12□□□□□ -1.11
SF3A1-208ENST00000485618 TAS2R13Q9NYV9 303 aa8.12□□□□□ -1.11
SF3A1-208ENST00000485618 SIRPGQ9P1W8 387 aa8.12□□□□□ -1.11
SF3A1-208ENST00000485618 DMGDHQ9UI17 866 aaKnown RBP8.12□□□□□ -1.11
SF3A1-208ENST00000485618 TMPRSS11EQ9UL52 423 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms