RNA–Protein interactions for RNA: ENST00000485513.1

HLA-F-227, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 778 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-227ENST00000485513 PPP1CAP62136 330 aa25.15■■□□□ 1.62
HLA-F-227ENST00000485513 PRPSAP1Q14558 356 aa25.15■■□□□ 1.62
HLA-F-227ENST00000485513 ANKRD20A2Q5SQ80 823 aa25.15■■□□□ 1.62
HLA-F-227ENST00000485513 ANKRD20A1Q5TYW2 823 aa25.15■■□□□ 1.62
HLA-F-227ENST00000485513 ANKRD20A3Q5VUR7 823 aa25.15■■□□□ 1.62
HLA-F-227ENST00000485513 METRNLQ641Q3 311 aa25.15■■□□□ 1.62
HLA-F-227ENST00000485513 CYB5D1Q6P9G0 228 aa25.15■■□□□ 1.62
HLA-F-227ENST00000485513 DET1Q7L5Y6 550 aa25.15■■□□□ 1.62
HLA-F-227ENST00000485513 BEND7Q8N7W2 519 aaPredicted RBP25.15■■□□□ 1.62
HLA-F-227ENST00000485513 GALNT6Q8NCL4 622 aa25.15■■□□□ 1.62
HLA-F-227ENST00000485513 STAMBPL1Q96FJ0 436 aa25.15■■□□□ 1.62
HLA-F-227ENST00000485513 PANX2Q96RD6 677 aa25.15■■□□□ 1.62
HLA-F-227ENST00000485513 APOL2Q9BQE5 337 aa25.15■■□□□ 1.62
HLA-F-227ENST00000485513 IMP3Q9NV31 184 aaKnown RBP25.15■■□□□ 1.62
HLA-F-227ENST00000485513 RCCD1A6NED2 376 aa25.14■■□□□ 1.62
HLA-F-227ENST00000485513 C5orf60A6NFR6 353 aa25.14■■□□□ 1.62
HLA-F-227ENST00000485513 SOWAHDA6NJG2 315 aa25.14■■□□□ 1.62
HLA-F-227ENST00000485513 SRP72O76094 671 aaKnown RBP25.14■■□□□ 1.62
HLA-F-227ENST00000485513 STK10O94804 968 aaKnown RBP25.14■■□□□ 1.62
HLA-F-227ENST00000485513 RBP3P10745 1247 aa25.14■■□□□ 1.62
HLA-F-227ENST00000485513 MTHFD1P11586 935 aaKnown RBP25.14■■□□□ 1.62
HLA-F-227ENST00000485513 PSMB4P28070 264 aa25.14■■□□□ 1.62
HLA-F-227ENST00000485513 PTPN7P35236 360 aa25.14■■□□□ 1.62
HLA-F-227ENST00000485513 DLSTP36957 453 aa25.14■■□□□ 1.62
HLA-F-227ENST00000485513 NAP1L1P55209 391 aaKnown RBP25.14■■□□□ 1.62
HLA-F-227ENST00000485513 OLIG2Q13516 323 aa25.14■■□□□ 1.62
HLA-F-227ENST00000485513 PLCL1Q15111 1095 aa25.14■■□□□ 1.62
HLA-F-227ENST00000485513 DEFB109BQ30KR1 87 aa25.14■■□□□ 1.62
HLA-F-227ENST00000485513 CRTC2Q53ET0 693 aaPredicted RBP25.14■■□□□ 1.62
HLA-F-227ENST00000485513 C16orf46Q6P387 395 aa25.14■■□□□ 1.62
HLA-F-227ENST00000485513 PPP1R3BQ86XI6 285 aa25.14■■□□□ 1.62
HLA-F-227ENST00000485513 UBXN4Q92575 508 aa25.14■■□□□ 1.62
HLA-F-227ENST00000485513 ASB8Q9H765 288 aa25.14■■□□□ 1.62
HLA-F-227ENST00000485513 SEMA5BQ9P283 1151 aa25.14■■□□□ 1.62
HLA-F-227ENST00000485513 FKBPLQ9UIM3 349 aa25.14■■□□□ 1.62
HLA-F-227ENST00000485513 LNPEPQ9UIQ6 1025 aa25.14■■□□□ 1.62
HLA-F-227ENST00000485513 MRPS18BQ9Y676 258 aaKnown RBP25.14■■□□□ 1.62
HLA-F-227ENST00000485513 IGHV5-51A0A0C4DH38 117 aa25.13■■□□□ 1.61
HLA-F-227ENST00000485513 CCDC66A2RUB6 948 aa25.13■■□□□ 1.61
HLA-F-227ENST00000485513 MGAT4DA6NG13 374 aa25.13■■□□□ 1.61
HLA-F-227ENST00000485513 KCNN4O15554 427 aa25.13■■□□□ 1.61
HLA-F-227ENST00000485513 SPAG6O75602 509 aa25.13■■□□□ 1.61
HLA-F-227ENST00000485513 IPO7O95373 1038 aaKnown RBP25.13■■□□□ 1.61
HLA-F-227ENST00000485513 F8A1P23610 371 aa25.13■■□□□ 1.61
HLA-F-227ENST00000485513 LARP7Q4G0J3 582 aaKnown RBP eCLIP25.13■■□□□ 1.61
HLA-F-227ENST00000485513 DARS2Q6PI48 645 aaKnown RBP25.13■■□□□ 1.61
HLA-F-227ENST00000485513 PTRH1Q86Y79 214 aaKnown RBP25.13■■□□□ 1.61
HLA-F-227ENST00000485513 APOBEC4Q8WW27 367 aaKnown RBP25.13■■□□□ 1.61
HLA-F-227ENST00000485513 FAM118BQ9BPY3 351 aa25.13■■□□□ 1.61
HLA-F-227ENST00000485513 WWP1Q9H0M0 922 aa25.13■■□□□ 1.61
HLA-F-227ENST00000485513 CROTQ9UKG9 612 aa25.13■■□□□ 1.61
HLA-F-227ENST00000485513 KCTD3Q9Y597 815 aa25.13■■□□□ 1.61
HLA-F-227ENST00000485513 CFAP20Q9Y6A4 193 aaKnown RBP25.13■■□□□ 1.61
HLA-F-227ENST00000485513 DUSP10Q9Y6W6 482 aa25.13■■□□□ 1.61
HLA-F-227ENST00000485513 KLHL33A6NCF5 533 aa25.12■■□□□ 1.61
HLA-F-227ENST00000485513 GOLGA6L3A6NEY3 463 aa25.12■■□□□ 1.61
HLA-F-227ENST00000485513 CETN2P41208 172 aa25.12■■□□□ 1.61
HLA-F-227ENST00000485513 RWDD2BP57060 319 aa25.12■■□□□ 1.61
HLA-F-227ENST00000485513 ATP1A1-AS1Q5TC04 95 aa25.12■■□□□ 1.61
HLA-F-227ENST00000485513 TMTC1Q8IUR5 882 aa25.12■■□□□ 1.61
HLA-F-227ENST00000485513 SIDT2Q8NBJ9 832 aaKnown RBP25.12■■□□□ 1.61
HLA-F-227ENST00000485513 OR2L2Q8NH16 312 aa25.12■■□□□ 1.61
HLA-F-227ENST00000485513 CCDC110Q8TBZ0 833 aa25.12■■□□□ 1.61
HLA-F-227ENST00000485513 SLC41A2Q96JW4 573 aa25.12■■□□□ 1.61
HLA-F-227ENST00000485513 INSM2Q96T92 566 aaPredicted RBP25.12■■□□□ 1.61
HLA-F-227ENST00000485513 PDE7BQ9NP56 450 aa25.12■■□□□ 1.61
HLA-F-227ENST00000485513 ACSL5Q9ULC5 683 aa25.12■■□□□ 1.61
HLA-F-227ENST00000485513 PCDHB3Q9Y5E6 796 aa25.12■■□□□ 1.61
HLA-F-227ENST00000485513 CRTAMO95727 393 aa25.11■■□□□ 1.61
HLA-F-227ENST00000485513 PDE1BQ01064 536 aa25.11■■□□□ 1.61
HLA-F-227ENST00000485513 TUBB3Q13509 450 aa25.11■■□□□ 1.61
HLA-F-227ENST00000485513 BCL7AQ4VC05 210 aa25.11■■□□□ 1.61
HLA-F-227ENST00000485513 C9orf43Q8TAL5 461 aaPredicted RBP25.11■■□□□ 1.61
HLA-F-227ENST00000485513 NAT14Q8WUY8 206 aa25.11■■□□□ 1.61
HLA-F-227ENST00000485513 DCUN1D1Q96GG9 259 aa25.11■■□□□ 1.61
HLA-F-227ENST00000485513 C12orf66Q96MD2 445 aa25.11■■□□□ 1.61
HLA-F-227ENST00000485513 SPATA13Q96N96 652 aa25.11■■□□□ 1.61
HLA-F-227ENST00000485513 PPP1R2P1Q96PQ5 205 aa25.11■■□□□ 1.61
HLA-F-227ENST00000485513 MAP3K3Q99759 626 aa25.11■■□□□ 1.61
HLA-F-227ENST00000485513 FAM8A1Q9UBU6 413 aa25.11■■□□□ 1.61
HLA-F-227ENST00000485513 CRLS1Q9UJA2 301 aa25.11■■□□□ 1.61
HLA-F-227ENST00000485513 BTNL10A8MVZ5 291 aa25.1■■□□□ 1.61
HLA-F-227ENST00000485513 TJP3O95049 919 aa25.1■■□□□ 1.61
HLA-F-227ENST00000485513 CCNYL3P0C7X3 344 aa25.1■■□□□ 1.61
HLA-F-227ENST00000485513 FOLR1P15328 257 aa25.1■■□□□ 1.61
HLA-F-227ENST00000485513 ZNF75DP51815 510 aa25.1■■□□□ 1.61
HLA-F-227ENST00000485513 XIAPP98170 497 aa25.1■■□□□ 1.61
HLA-F-227ENST00000485513 KCNAB1Q14722 419 aa25.1■■□□□ 1.61
HLA-F-227ENST00000485513 DNTTIP2Q5QJE6 756 aaKnown RBP25.1■■□□□ 1.61
HLA-F-227ENST00000485513 DUS1LQ6P1R4 473 aaKnown RBP25.1■■□□□ 1.61
HLA-F-227ENST00000485513 OR13C4Q8NGS5 318 aa25.1■■□□□ 1.61
HLA-F-227ENST00000485513 ZFPM2Q8WW38 1151 aa25.1■■□□□ 1.61
HLA-F-227ENST00000485513 ALG3Q92685 438 aa25.1■■□□□ 1.61
HLA-F-227ENST00000485513 CD180Q99467 661 aa25.1■■□□□ 1.61
HLA-F-227ENST00000485513 RARRES3Q9UL19 164 aa25.1■■□□□ 1.61
HLA-F-227ENST00000485513 PADI1Q9ULC6 663 aa25.1■■□□□ 1.61
HLA-F-227ENST00000485513 OR5K3A6NET4 321 aa25.09■■□□□ 1.61
HLA-F-227ENST00000485513 TLCD2A6NGC4 264 aa25.09■■□□□ 1.61
HLA-F-227ENST00000485513 KATNA1O75449 491 aa25.09■■□□□ 1.61
HLA-F-227ENST00000485513 TIAF1O95411 115 aa25.09■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms