RNA–Protein interactions for RNA: ENST00000485080.6

SREBF1-213, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 1,230 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-213ENST00000485080 OR1D5P58170 312 aa17.43■□□□□ 0.38
SREBF1-213ENST00000485080 CKAP4Q07065 602 aaKnown RBP17.43■□□□□ 0.38
SREBF1-213ENST00000485080 SEMA3AQ14563 771 aa17.43■□□□□ 0.38
SREBF1-213ENST00000485080 CLCA4Q14CN2 919 aa17.43■□□□□ 0.38
SREBF1-213ENST00000485080 WHAMMP3Q1A5X7 153 aa17.43■□□□□ 0.38
SREBF1-213ENST00000485080 TYSND1Q2T9J0 566 aa17.43■□□□□ 0.38
SREBF1-213ENST00000485080 DNAJC21Q5F1R6 531 aaKnown RBP17.43■□□□□ 0.38
SREBF1-213ENST00000485080 MRNIPQ6NTE8 343 aa17.43■□□□□ 0.38
SREBF1-213ENST00000485080 CASC4Q6P4E1 433 aa17.43■□□□□ 0.38
SREBF1-213ENST00000485080 LRRC6Q86X45 466 aa17.43■□□□□ 0.38
SREBF1-213ENST00000485080 ZFPM2Q8WW38 1151 aa17.43■□□□□ 0.38
SREBF1-213ENST00000485080 FCRL3Q96P31 734 aaPredicted RBP17.43■□□□□ 0.38
SREBF1-213ENST00000485080 GFM1Q96RP9 751 aaKnown RBP17.43■□□□□ 0.38
SREBF1-213ENST00000485080 ERP44Q9BS26 406 aa17.43■□□□□ 0.38
SREBF1-213ENST00000485080 TRIM51Q9BSJ1 452 aa17.43■□□□□ 0.38
SREBF1-213ENST00000485080 MARCH4Q9P2E8 410 aaPredicted RBP17.43■□□□□ 0.38
SREBF1-213ENST00000485080 DKK4Q9UBT3 224 aa17.43■□□□□ 0.38
SREBF1-213ENST00000485080 WDR37Q9Y2I8 494 aa17.43■□□□□ 0.38
SREBF1-213ENST00000485080 TRBV23OR9-2A0A075B6M9 112 aa17.42■□□□□ 0.38
SREBF1-213ENST00000485080 IGHV1OR21-1A0A087WYE8 117 aa17.42■□□□□ 0.38
SREBF1-213ENST00000485080 ZCWPW2A0A1B0GU75 182 aa17.42■□□□□ 0.38
SREBF1-213ENST00000485080 PRMT5O14744 637 aaPredicted RBP17.42■□□□□ 0.38
SREBF1-213ENST00000485080 CSO75390 466 aaKnown RBP17.42■□□□□ 0.38
SREBF1-213ENST00000485080 CPNE6O95741 557 aa17.42■□□□□ 0.38
SREBF1-213ENST00000485080 TTC4O95801 387 aa17.42■□□□□ 0.38
SREBF1-213ENST00000485080 FTH1P02794 183 aa17.42■□□□□ 0.38
SREBF1-213ENST00000485080 OR56A5P0C7T3 313 aa17.42■□□□□ 0.38
SREBF1-213ENST00000485080 CCKBRP32239 447 aa17.42■□□□□ 0.38
SREBF1-213ENST00000485080 PDX1P52945 283 aa17.42■□□□□ 0.38
SREBF1-213ENST00000485080 ADARP55265 1226 aaKnown RBP17.42■□□□□ 0.38
SREBF1-213ENST00000485080 PLOD1Q02809 727 aaPredicted RBP17.42■□□□□ 0.38
SREBF1-213ENST00000485080 ZFP36L1Q07352 338 aaKnown RBP17.42■□□□□ 0.38
SREBF1-213ENST00000485080 RTP5Q14D33 572 aa17.42■□□□□ 0.38
SREBF1-213ENST00000485080 RNF187Q5TA31 235 aaPredicted RBP17.42■□□□□ 0.38
SREBF1-213ENST00000485080 CAPRIN2Q6IMN6 1127 aaKnown RBP17.42■□□□□ 0.38
SREBF1-213ENST00000485080 CES3Q6UWW8 571 aa17.42■□□□□ 0.38
SREBF1-213ENST00000485080 SDCCAG8Q86SQ7 713 aaPredicted RBP17.42■□□□□ 0.38
SREBF1-213ENST00000485080 LMNTD2Q8IXW0 634 aa17.42■□□□□ 0.38
SREBF1-213ENST00000485080 Q8N9G6 341 aaPredicted RBP17.42■□□□□ 0.38
SREBF1-213ENST00000485080 BBOF1Q8ND07 529 aa17.42■□□□□ 0.38
SREBF1-213ENST00000485080 LRRC39Q96DD0 335 aa17.42■□□□□ 0.38
SREBF1-213ENST00000485080 STAMBPL1Q96FJ0 436 aa17.42■□□□□ 0.38
SREBF1-213ENST00000485080 SLC38A3Q99624 504 aa17.42■□□□□ 0.38
SREBF1-213ENST00000485080 COG4Q9H9E3 785 aa17.42■□□□□ 0.38
SREBF1-213ENST00000485080 SLC40A1Q9NP59 571 aa17.42■□□□□ 0.38
SREBF1-213ENST00000485080 PRSS21Q9Y6M0 314 aa17.42■□□□□ 0.38
SREBF1-213ENST00000485080 RPS6KL1Q9Y6S9 549 aa17.42■□□□□ 0.38
SREBF1-213ENST00000485080 TRABD2BA6NFA1 517 aa17.41■□□□□ 0.38
SREBF1-213ENST00000485080 EFCAB8A8MWE9 144 aa17.41■□□□□ 0.38
SREBF1-213ENST00000485080 CASC3O15234 703 aaKnown RBP17.41■□□□□ 0.38
SREBF1-213ENST00000485080 RAD51CO43502 376 aa17.41■□□□□ 0.38
SREBF1-213ENST00000485080 OR1I1O60431 355 aa17.41■□□□□ 0.38
SREBF1-213ENST00000485080 VIPP01282 170 aa17.41■□□□□ 0.38
SREBF1-213ENST00000485080 CAPNS1P04632 268 aa17.41■□□□□ 0.38
SREBF1-213ENST00000485080 POLBP06746 335 aa17.41■□□□□ 0.38
SREBF1-213ENST00000485080 OGNP20774 298 aaKnown RBP17.41■□□□□ 0.38
SREBF1-213ENST00000485080 RPS3P23396 243 aaKnown RBP eCLIP17.41■□□□□ 0.382e-8■■□□□ 14
SREBF1-213ENST00000485080 ALDH4A1P30038 563 aa17.41■□□□□ 0.38
SREBF1-213ENST00000485080 RPL21P46778 160 aaKnown RBP17.41■□□□□ 0.38
SREBF1-213ENST00000485080 CD151P48509 253 aa17.41■□□□□ 0.38
SREBF1-213ENST00000485080 DRG2P55039 364 aaKnown RBP17.41■□□□□ 0.38
SREBF1-213ENST00000485080 RPE65Q16518 533 aa17.41■□□□□ 0.38
SREBF1-213ENST00000485080 DUPD1Q68J44 220 aa17.41■□□□□ 0.38
SREBF1-213ENST00000485080 NEPROQ6NW34 567 aa17.41■□□□□ 0.38
SREBF1-213ENST00000485080 TMEM26Q6ZUK4 368 aa17.41■□□□□ 0.38
SREBF1-213ENST00000485080 SLITRK4Q8IW52 837 aa17.41■□□□□ 0.38
SREBF1-213ENST00000485080 CFAP206Q8IYR0 622 aa17.41■□□□□ 0.38
SREBF1-213ENST00000485080 PDIK1LQ8N165 341 aa17.41■□□□□ 0.38
SREBF1-213ENST00000485080 NAT14Q8WUY8 206 aa17.41■□□□□ 0.38
SREBF1-213ENST00000485080 LIN37Q96GY3 246 aaPredicted RBP17.41■□□□□ 0.38
SREBF1-213ENST00000485080 TMEM74Q96NL1 305 aa17.41■□□□□ 0.38
SREBF1-213ENST00000485080 EBNA1BP2Q99848 306 aaKnown RBP17.41■□□□□ 0.38
SREBF1-213ENST00000485080 CARD6Q9BX69 1037 aa17.41■□□□□ 0.38
SREBF1-213ENST00000485080 P2RY12Q9H244 342 aa17.41■□□□□ 0.38
SREBF1-213ENST00000485080 KCNK4Q9NYG8 393 aa17.41■□□□□ 0.38
SREBF1-213ENST00000485080 WHRNQ9P202 907 aa17.41■□□□□ 0.38
SREBF1-213ENST00000485080 PDP2Q9P2J9 529 aa17.41■□□□□ 0.38
SREBF1-213ENST00000485080 ENTPD2Q9Y5L3 495 aa17.41■□□□□ 0.38
SREBF1-213ENST00000485080 FAM169AQ9Y6X4 670 aa17.41■□□□□ 0.38
SREBF1-213ENST00000485080 TMEM8BA6NDV4 472 aa17.4■□□□□ 0.38
SREBF1-213ENST00000485080 OR52A4PA6NMU1 304 aa17.4■□□□□ 0.38
SREBF1-213ENST00000485080 LIN7AO14910 233 aaPredicted RBP17.4■□□□□ 0.38
SREBF1-213ENST00000485080 PFDN6O15212 129 aa17.4■□□□□ 0.38
SREBF1-213ENST00000485080 URI1O94763 535 aaPredicted RBP17.4■□□□□ 0.38
SREBF1-213ENST00000485080 MTHFD1P11586 935 aaKnown RBP17.4■□□□□ 0.38
SREBF1-213ENST00000485080 PGAM1P18669 254 aa17.4■□□□□ 0.38
SREBF1-213ENST00000485080 PBLDP30039 288 aaPredicted RBP17.4■□□□□ 0.38
SREBF1-213ENST00000485080 ITGA8P53708 1063 aa17.4■□□□□ 0.38
SREBF1-213ENST00000485080 C2orf54Q08AI8 447 aa17.4■□□□□ 0.38
SREBF1-213ENST00000485080 SEPT7Q16181 437 aaKnown RBP17.4■□□□□ 0.38
SREBF1-213ENST00000485080 MSS51Q4VC12 460 aa17.4■□□□□ 0.38
SREBF1-213ENST00000485080 WDR74Q6RFH5 385 aaPredicted RBP17.4■□□□□ 0.38
SREBF1-213ENST00000485080 IGF2-ASQ6U949 168 aa17.4■□□□□ 0.38
SREBF1-213ENST00000485080 UNQ6494/PRO21346Q6UXR6 183 aa17.4■□□□□ 0.38
SREBF1-213ENST00000485080 PIM3Q86V86 326 aa17.4■□□□□ 0.38
SREBF1-213ENST00000485080 MARCH9Q86YJ5 346 aa17.4■□□□□ 0.38
SREBF1-213ENST00000485080 CILP2Q8IUL8 1156 aa17.4■□□□□ 0.38
SREBF1-213ENST00000485080 TRIM48Q8IWZ4 208 aa17.4■□□□□ 0.38
SREBF1-213ENST00000485080 OR10G6Q8NH81 332 aa17.4■□□□□ 0.38
SREBF1-213ENST00000485080 ZNF669Q96BR6 464 aaPredicted RBP17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms