RNA–Protein interactions for RNA: ENST00000485023.1

DDR1-246, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 3

Gene DDR1, Length 515 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-246ENST00000485023 ITGB6P18564 788 aa15.9■□□□□ 0.14
DDR1-246ENST00000485023 CASQ1P31415 396 aa15.9■□□□□ 0.14
DDR1-246ENST00000485023 CCKBRP32239 447 aa15.9■□□□□ 0.14
DDR1-246ENST00000485023 PAFAH1B1P43034 410 aa15.9■□□□□ 0.14
DDR1-246ENST00000485023 PTGIRP43119 386 aa15.9■□□□□ 0.14
DDR1-246ENST00000485023 LSSP48449 732 aa15.9■□□□□ 0.14
DDR1-246ENST00000485023 GPLD1P80108 840 aa15.9■□□□□ 0.14
DDR1-246ENST00000485023 CFHR1Q03591 330 aa15.9■□□□□ 0.14
DDR1-246ENST00000485023 GPR18Q14330 331 aa15.9■□□□□ 0.14
DDR1-246ENST00000485023 C16orf72Q14CZ0 275 aa15.9■□□□□ 0.14
DDR1-246ENST00000485023 RPE65Q16518 533 aa15.9■□□□□ 0.14
DDR1-246ENST00000485023 METRNLQ641Q3 311 aa15.9■□□□□ 0.14
DDR1-246ENST00000485023 XKR5Q6UX68 686 aa15.9■□□□□ 0.14
DDR1-246ENST00000485023 WASH2PQ6VEQ5 465 aa15.9■□□□□ 0.14
DDR1-246ENST00000485023 NAPRTQ6XQN6 538 aa15.9■□□□□ 0.14
DDR1-246ENST00000485023 SYT10Q6XYQ8 523 aa15.9■□□□□ 0.14
DDR1-246ENST00000485023 RAB11FIP2Q7L804 512 aa15.9■□□□□ 0.14
DDR1-246ENST00000485023 WDR36Q8NI36 951 aaKnown RBP15.9■□□□□ 0.14
DDR1-246ENST00000485023 HM13Q8TCT9 377 aa15.9■□□□□ 0.14
DDR1-246ENST00000485023 NCSTNQ92542 709 aa15.9■□□□□ 0.14
DDR1-246ENST00000485023 LINC00615Q96LM1 132 aaPredicted RBP15.9■□□□□ 0.14
DDR1-246ENST00000485023 RMDN2Q96LZ7 410 aa15.9■□□□□ 0.14
DDR1-246ENST00000485023 SERPINB12Q96P63 405 aa15.9■□□□□ 0.14
DDR1-246ENST00000485023 INSM2Q96T92 566 aaPredicted RBP15.9■□□□□ 0.14
DDR1-246ENST00000485023 LDHAL6BQ9BYZ2 381 aaPredicted RBP15.9■□□□□ 0.14
DDR1-246ENST00000485023 COG4Q9H9E3 785 aa15.9■□□□□ 0.14
DDR1-246ENST00000485023 WASH6PQ9NQA3 447 aa15.9■□□□□ 0.14
DDR1-246ENST00000485023 TREX1Q9NSU2 369 aa15.9■□□□□ 0.14
DDR1-246ENST00000485023 POT1Q9NUX5 634 aa15.9■□□□□ 0.14
DDR1-246ENST00000485023 ANAPC5Q9UJX4 755 aa15.9■□□□□ 0.14
DDR1-246ENST00000485023 LOXL2Q9Y4K0 774 aa15.9■□□□□ 0.14
DDR1-246ENST00000485023 FREM2Q5SZK8 3169 aa15.89■□□□□ 0.13
DDR1-246ENST00000485023 SRRM3A6NNA2 597 aaPredicted RBP15.89■□□□□ 0.13
DDR1-246ENST00000485023 A8MU76 341 aa15.89■□□□□ 0.13
DDR1-246ENST00000485023 GOLGA8KD6RF30 607 aa15.89■□□□□ 0.13
DDR1-246ENST00000485023 GOLGA8TH3BQL2 631 aa15.89■□□□□ 0.13
DDR1-246ENST00000485023 TLX3O43711 291 aaPredicted RBP15.89■□□□□ 0.13
DDR1-246ENST00000485023 TNFSF15O95150 251 aa15.89■□□□□ 0.13
DDR1-246ENST00000485023 ITIH1P19827 911 aa15.89■□□□□ 0.13
DDR1-246ENST00000485023 RBMS1P29558 406 aaKnown RBP15.89■□□□□ 0.13
DDR1-246ENST00000485023 NSG1P42857 185 aa15.89■□□□□ 0.13
DDR1-246ENST00000485023 PREPP48147 710 aa15.89■□□□□ 0.13
DDR1-246ENST00000485023 ZFP36L1Q07352 338 aaKnown RBP15.89■□□□□ 0.13
DDR1-246ENST00000485023 PTK6Q13882 451 aa15.89■□□□□ 0.13
DDR1-246ENST00000485023 ITIH4Q14624 930 aa15.89■□□□□ 0.13
DDR1-246ENST00000485023 BRD3Q15059 726 aa15.89■□□□□ 0.13
DDR1-246ENST00000485023 TMEM26Q6ZUK4 368 aa15.89■□□□□ 0.13
DDR1-246ENST00000485023 FBXO39Q8N4B4 442 aa15.89■□□□□ 0.13
DDR1-246ENST00000485023 NAT8LQ8N9F0 302 aa15.89■□□□□ 0.13
DDR1-246ENST00000485023 AVL9Q8NBF6 648 aa15.89■□□□□ 0.13
DDR1-246ENST00000485023 GRAMD1AQ96CP6 724 aa15.89■□□□□ 0.13
DDR1-246ENST00000485023 LIN37Q96GY3 246 aaPredicted RBP15.89■□□□□ 0.13
DDR1-246ENST00000485023 C12orf66Q96MD2 445 aa15.89■□□□□ 0.13
DDR1-246ENST00000485023 TRIM51Q9BSJ1 452 aa15.89■□□□□ 0.13
DDR1-246ENST00000485023 CCM2Q9BSQ5 444 aa15.89■□□□□ 0.13
DDR1-246ENST00000485023 KIFC1Q9BW19 673 aa15.89■□□□□ 0.13
DDR1-246ENST00000485023 VPS37BQ9H9H4 285 aa15.89■□□□□ 0.13
DDR1-246ENST00000485023 KCND1Q9NSA2 647 aa15.89■□□□□ 0.13
DDR1-246ENST00000485023 IL1RAPL1Q9NZN1 696 aa15.89■□□□□ 0.13
DDR1-246ENST00000485023 SAMD15Q9P1V8 674 aa15.89■□□□□ 0.13
DDR1-246ENST00000485023 PISDQ9UG56 409 aa15.89■□□□□ 0.13
DDR1-246ENST00000485023 SOX13Q9UN79 622 aa15.89■□□□□ 0.13
DDR1-246ENST00000485023 LILRA5A6NI73 299 aa15.88■□□□□ 0.13
DDR1-246ENST00000485023 TMX2-CTNND1H3BSU7 103 aa15.88■□□□□ 0.13
DDR1-246ENST00000485023 PLD2O14939 933 aa15.88■□□□□ 0.13
DDR1-246ENST00000485023 CD3EAPO15446 510 aaKnown RBP15.88■□□□□ 0.13
DDR1-246ENST00000485023 UBXN7O94888 489 aa15.88■□□□□ 0.13
DDR1-246ENST00000485023 VAPBO95292 243 aa15.88■□□□□ 0.13
DDR1-246ENST00000485023 JMJD7P0C870 316 aa15.88■□□□□ 0.13
DDR1-246ENST00000485023 MTHFD1P11586 935 aaKnown RBP15.88■□□□□ 0.13
DDR1-246ENST00000485023 LIMK2P53671 638 aa15.88■□□□□ 0.13
DDR1-246ENST00000485023 EPHA4P54764 986 aa15.88■□□□□ 0.13
DDR1-246ENST00000485023 CSE1LP55060 971 aaKnown RBP15.88■□□□□ 0.13
DDR1-246ENST00000485023 MRPS25P82663 173 aaKnown RBP15.88■□□□□ 0.13
DDR1-246ENST00000485023 DR1Q01658 176 aa15.88■□□□□ 0.13
DDR1-246ENST00000485023 BOP1Q14137 746 aaKnown RBP15.88■□□□□ 0.13
DDR1-246ENST00000485023 PLCL1Q15111 1095 aa15.88■□□□□ 0.13
DDR1-246ENST00000485023 LYPLAL1Q5VWZ2 237 aa15.88■□□□□ 0.13
DDR1-246ENST00000485023 IZUMO3Q5VZ72 239 aa15.88■□□□□ 0.13
DDR1-246ENST00000485023 PACS1Q6VY07 963 aa15.88■□□□□ 0.13
DDR1-246ENST00000485023 JAMLQ86YT9 394 aa15.88■□□□□ 0.13
DDR1-246ENST00000485023 PPIL6Q8IXY8 311 aa15.88■□□□□ 0.13
DDR1-246ENST00000485023 ELMO1Q92556 727 aa15.88■□□□□ 0.13
DDR1-246ENST00000485023 RSC1A1Q92681 617 aa15.88■□□□□ 0.13
DDR1-246ENST00000485023 PEX13Q92968 403 aa15.88■□□□□ 0.13
DDR1-246ENST00000485023 ZNF669Q96BR6 464 aaPredicted RBP15.88■□□□□ 0.13
DDR1-246ENST00000485023 PRR11Q96HE9 360 aaPredicted RBP15.88■□□□□ 0.13
DDR1-246ENST00000485023 NAF1Q96HR8 494 aaKnown RBP15.88■□□□□ 0.13
DDR1-246ENST00000485023 KRT12Q99456 494 aa15.88■□□□□ 0.13
DDR1-246ENST00000485023 TTC1Q99614 292 aa15.88■□□□□ 0.13
DDR1-246ENST00000485023 MRM3Q9HC36 420 aaKnown RBP15.88■□□□□ 0.13
DDR1-246ENST00000485023 XAB2Q9HCS7 855 aaKnown RBP15.88■□□□□ 0.13
DDR1-246ENST00000485023 SLC40A1Q9NP59 571 aa15.88■□□□□ 0.13
DDR1-246ENST00000485023 OGFRQ9NZT2 677 aa15.88■□□□□ 0.13
DDR1-246ENST00000485023 DKK4Q9UBT3 224 aa15.88■□□□□ 0.13
DDR1-246ENST00000485023 PCYOX1Q9UHG3 505 aa15.88■□□□□ 0.13
DDR1-246ENST00000485023 ACSL5Q9ULC5 683 aa15.88■□□□□ 0.13
DDR1-246ENST00000485023 MAD1L1Q9Y6D9 718 aa15.88■□□□□ 0.13
DDR1-246ENST00000485023 ZFHX4Q86UP3 3567 aa15.88■□□□□ 0.13
DDR1-246ENST00000485023 DNALI1O14645 258 aaPredicted RBP15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms