RNA–Protein interactions for RNA: ENST00000484087.5

BRCA1-216, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 1,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-216ENST00000484087 MBNL1Q9NR56 388 aaKnown RBP6.86□□□□□ -1.31
BRCA1-216ENST00000484087 DNAAF2Q9NVR5 837 aaKnown RBP6.86□□□□□ -1.31
BRCA1-216ENST00000484087 THAP1Q9NVV9 213 aa6.86□□□□□ -1.31
BRCA1-216ENST00000484087 SIRPGQ9P1W8 387 aa6.86□□□□□ -1.31
BRCA1-216ENST00000484087 COPG2Q9UBF2 871 aa6.86□□□□□ -1.31
BRCA1-216ENST00000484087 PNMA8BQ9ULN7 279 aaPredicted RBP6.86□□□□□ -1.31
BRCA1-216ENST00000484087 PCDHGC4Q9Y5F7 938 aa6.86□□□□□ -1.31
BRCA1-216ENST00000484087 PLXNB3Q9ULL4 1909 aa6.86□□□□□ -1.31
BRCA1-216ENST00000484087 MAP1BP46821 2468 aaKnown RBP6.86□□□□□ -1.31
BRCA1-216ENST00000484087 ARID1BQ8NFD5 2236 aaPredicted RBP6.86□□□□□ -1.31
BRCA1-216ENST00000484087 A0A0G2JND7 137 aa6.85□□□□□ -1.31
BRCA1-216ENST00000484087 ANKRD66B4E2M5 251 aa6.85□□□□□ -1.31
BRCA1-216ENST00000484087 NEMP1O14524 444 aa6.85□□□□□ -1.31
BRCA1-216ENST00000484087 VILLO15195 856 aa6.85□□□□□ -1.31
BRCA1-216ENST00000484087 CASC3O15234 703 aaKnown RBP6.85□□□□□ -1.31
BRCA1-216ENST00000484087 STX7O15400 261 aaKnown RBP6.85□□□□□ -1.31
BRCA1-216ENST00000484087 CD3EAPO15446 510 aaKnown RBP6.85□□□□□ -1.31
BRCA1-216ENST00000484087 HYAL3O43820 417 aaPredicted RBP6.85□□□□□ -1.31
BRCA1-216ENST00000484087 ATP5HO75947 161 aa6.85□□□□□ -1.31
BRCA1-216ENST00000484087 CER1O95813 267 aa6.85□□□□□ -1.31
BRCA1-216ENST00000484087 PROCP04070 461 aa6.85□□□□□ -1.31
BRCA1-216ENST00000484087 SERPINE1P05121 402 aa6.85□□□□□ -1.31
BRCA1-216ENST00000484087 FBXO45P0C2W1 286 aa6.85□□□□□ -1.31
BRCA1-216ENST00000484087 THEGLP0DJG4 465 aa6.85□□□□□ -1.31
BRCA1-216ENST00000484087 MYL2P10916 166 aa6.85□□□□□ -1.31
BRCA1-216ENST00000484087 RALBP11234 206 aa6.85□□□□□ -1.31
BRCA1-216ENST00000484087 TIMP2P16035 220 aa6.85□□□□□ -1.31
BRCA1-216ENST00000484087 LPOP22079 712 aaPredicted RBP6.85□□□□□ -1.31
BRCA1-216ENST00000484087 ARNTP27540 789 aa6.85□□□□□ -1.31
BRCA1-216ENST00000484087 SERPINA4P29622 427 aa6.85□□□□□ -1.31
BRCA1-216ENST00000484087 IGFALSP35858 605 aa6.85□□□□□ -1.31
BRCA1-216ENST00000484087 PPARGP37231 505 aaPredicted RBP6.85□□□□□ -1.31
BRCA1-216ENST00000484087 CSNK1DP48730 415 aa6.85□□□□□ -1.31
BRCA1-216ENST00000484087 RPL26P61254 145 aaKnown RBP6.85□□□□□ -1.31
BRCA1-216ENST00000484087 ACVR1Q04771 509 aa6.85□□□□□ -1.31
BRCA1-216ENST00000484087 CCDC15Q0P6D6 951 aa6.85□□□□□ -1.31
BRCA1-216ENST00000484087 BST1Q10588 318 aa6.85□□□□□ -1.31
BRCA1-216ENST00000484087 TRAF2Q12933 501 aa6.85□□□□□ -1.31
BRCA1-216ENST00000484087 TEAD4Q15561 434 aa6.85□□□□□ -1.31
BRCA1-216ENST00000484087 FAM83EQ2M2I3 478 aa6.85□□□□□ -1.31
BRCA1-216ENST00000484087 SETMARQ53H47 684 aaPredicted RBP6.85□□□□□ -1.31
BRCA1-216ENST00000484087 LACTB2Q53H82 288 aaPredicted RBP6.85□□□□□ -1.31
BRCA1-216ENST00000484087 AARS2Q5JTZ9 985 aaKnown RBP6.85□□□□□ -1.31
BRCA1-216ENST00000484087 AGAP9Q5VTM2 703 aa6.85□□□□□ -1.31
BRCA1-216ENST00000484087 FAM45BPQ6NSW5 357 aa6.85□□□□□ -1.31
BRCA1-216ENST00000484087 TTC7BQ86TV6 843 aa6.85□□□□□ -1.31
BRCA1-216ENST00000484087 RBFAQ8N0V3 343 aa6.85□□□□□ -1.31
BRCA1-216ENST00000484087 TMEM145Q8NBT3 493 aa6.85□□□□□ -1.31
BRCA1-216ENST00000484087 GPR150Q8NGU9 434 aa6.85□□□□□ -1.31
BRCA1-216ENST00000484087 FAM45AQ8TCE6 357 aa6.85□□□□□ -1.31
BRCA1-216ENST00000484087 CCT6BQ92526 530 aa6.85□□□□□ -1.31
BRCA1-216ENST00000484087 TBRG4Q969Z0 631 aaKnown RBP eCLIP6.85□□□□□ -1.31
BRCA1-216ENST00000484087 ISG20Q96AZ6 181 aaKnown RBP6.85□□□□□ -1.31
BRCA1-216ENST00000484087 BMFQ96LC9 184 aa6.85□□□□□ -1.31
BRCA1-216ENST00000484087 TBATAQ96M53 351 aa6.85□□□□□ -1.31
BRCA1-216ENST00000484087 TRIB3Q96RU7 358 aa6.85□□□□□ -1.31
BRCA1-216ENST00000484087 TCF12Q99081 682 aa6.85□□□□□ -1.31
BRCA1-216ENST00000484087 TTC1Q99614 292 aa6.85□□□□□ -1.31
BRCA1-216ENST00000484087 MCMBPQ9BTE3 642 aa6.85□□□□□ -1.31
BRCA1-216ENST00000484087 MECRQ9BV79 373 aa6.85□□□□□ -1.31
BRCA1-216ENST00000484087 PCED1AQ9H1Q7 454 aa6.85□□□□□ -1.31
BRCA1-216ENST00000484087 TCEAL2Q9H3H9 227 aaPredicted RBP6.85□□□□□ -1.31
BRCA1-216ENST00000484087 ATP13A3Q9H7F0 1226 aa6.85□□□□□ -1.31
BRCA1-216ENST00000484087 CAB39LQ9H9S4 337 aa6.85□□□□□ -1.31
BRCA1-216ENST00000484087 PREBQ9HCU5 417 aa6.85□□□□□ -1.31
BRCA1-216ENST00000484087 PCDH12Q9NPG4 1184 aa6.85□□□□□ -1.31
BRCA1-216ENST00000484087 FBXO6Q9NRD1 293 aaPredicted RBP6.85□□□□□ -1.31
BRCA1-216ENST00000484087 CATSPERZQ9NTU4 200 aa6.85□□□□□ -1.31
BRCA1-216ENST00000484087 INTS10Q9NVR2 710 aaKnown RBP6.85□□□□□ -1.31
BRCA1-216ENST00000484087 NLE1Q9NVX2 485 aaPredicted RBP6.85□□□□□ -1.31
BRCA1-216ENST00000484087 UCKL1Q9NWZ5 548 aa6.85□□□□□ -1.31
BRCA1-216ENST00000484087 TMEM216Q9P0N5 145 aa6.85□□□□□ -1.31
BRCA1-216ENST00000484087 KLK13Q9UKR3 277 aa6.85□□□□□ -1.31
BRCA1-216ENST00000484087 PCOLCE2Q9UKZ9 415 aa6.85□□□□□ -1.31
BRCA1-216ENST00000484087 RPL26L1Q9UNX3 145 aaKnown RBP6.85□□□□□ -1.31
BRCA1-216ENST00000484087 RUVBL2Q9Y230 463 aaKnown RBP6.85□□□□□ -1.31
BRCA1-216ENST00000484087 VWA7Q9Y334 891 aa6.85□□□□□ -1.31
BRCA1-216ENST00000484087 PKP3Q9Y446 797 aa6.85□□□□□ -1.31
BRCA1-216ENST00000484087 ARL5AQ9Y689 179 aa6.85□□□□□ -1.31
BRCA1-216ENST00000484087 ZZEF1O43149 2961 aa6.85□□□□□ -1.31
BRCA1-216ENST00000484087 SCN8AQ9UQD0 1980 aa6.85□□□□□ -1.31
BRCA1-216ENST00000484087 IGF2RP11717 2491 aa6.85□□□□□ -1.31
BRCA1-216ENST00000484087 A0A1B0GTQ1 180 aa6.85□□□□□ -1.31
BRCA1-216ENST00000484087 A0A1W2PQ67 120 aa6.85□□□□□ -1.31
BRCA1-216ENST00000484087 TLR4O00206 839 aa6.85□□□□□ -1.31
BRCA1-216ENST00000484087 AREL1O15033 823 aa6.85□□□□□ -1.31
BRCA1-216ENST00000484087 FFAR2O15552 330 aa6.85□□□□□ -1.31
BRCA1-216ENST00000484087 PHGDHO43175 533 aaKnown RBP6.85□□□□□ -1.31
BRCA1-216ENST00000484087 FOXD2O60548 495 aaPredicted RBP6.85□□□□□ -1.31
BRCA1-216ENST00000484087 TRIM13O60858 407 aa6.85□□□□□ -1.31
BRCA1-216ENST00000484087 CBFA2T3O75081 653 aa6.85□□□□□ -1.31
BRCA1-216ENST00000484087 SOCS5O75159 536 aa6.85□□□□□ -1.31
BRCA1-216ENST00000484087 HAUS5O94927 633 aa6.85□□□□□ -1.31
BRCA1-216ENST00000484087 KLHL2O95198 593 aa6.85□□□□□ -1.31
BRCA1-216ENST00000484087 POP4O95707 220 aaKnown RBP6.85□□□□□ -1.31
BRCA1-216ENST00000484087 S1PR4O95977 384 aa6.85□□□□□ -1.31
BRCA1-216ENST00000484087 GOT2P00505 430 aaKnown RBP6.85□□□□□ -1.31
BRCA1-216ENST00000484087 PCCBP05166 539 aa6.85□□□□□ -1.31
BRCA1-216ENST00000484087 CELA2BP08218 269 aaPredicted RBP6.85□□□□□ -1.31
BRCA1-216ENST00000484087 PDHA1P08559 390 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms