RNA–Protein interactions for RNA: ENST00000482590.1

CLK1-212, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 626 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-212ENST00000482590 ALCAMQ13740 583 aa6.6□□□□□ -1.35
CLK1-212ENST00000482590 NOMO1Q15155 1222 aa6.6□□□□□ -1.35
CLK1-212ENST00000482590 PDGFRLQ15198 375 aa6.6□□□□□ -1.35
CLK1-212ENST00000482590 ALG11Q2TAA5 492 aa6.6□□□□□ -1.35
CLK1-212ENST00000482590 SMU1Q2TAY7 513 aa6.6□□□□□ -1.35
CLK1-212ENST00000482590 TIGD2Q4W5G0 525 aa6.6□□□□□ -1.35
CLK1-212ENST00000482590 ZNF805Q5CZA5 627 aa6.6□□□□□ -1.35
CLK1-212ENST00000482590 HECTD2Q5U5R9 776 aa6.6□□□□□ -1.35
CLK1-212ENST00000482590 SLC30A9Q6PML9 568 aa6.6□□□□□ -1.35
CLK1-212ENST00000482590 CACNA2D4Q7Z3S7 1137 aa6.6□□□□□ -1.35
CLK1-212ENST00000482590 SPATA2LQ8IUW3 424 aaPredicted RBP6.6□□□□□ -1.35
CLK1-212ENST00000482590 IQCF2Q8IXL9 164 aa6.6□□□□□ -1.35
CLK1-212ENST00000482590 TMEM86AQ8N2M4 240 aa6.6□□□□□ -1.35
CLK1-212ENST00000482590 FSIP1Q8NA03 581 aa6.6□□□□□ -1.35
CLK1-212ENST00000482590 BEND2Q8NDZ0 799 aa6.6□□□□□ -1.35
CLK1-212ENST00000482590 STKLD1Q8NE28 680 aa6.6□□□□□ -1.35
CLK1-212ENST00000482590 DENND6BQ8NEG7 585 aa6.6□□□□□ -1.35
CLK1-212ENST00000482590 LRRC15Q8TF66 581 aa6.6□□□□□ -1.35
CLK1-212ENST00000482590 GAB3Q8WWW8 586 aa6.6□□□□□ -1.35
CLK1-212ENST00000482590 ANP32BQ92688 251 aaKnown RBP6.6□□□□□ -1.35
CLK1-212ENST00000482590 SAAL1Q96ER3 474 aa6.6□□□□□ -1.35
CLK1-212ENST00000482590 ANKRD36BP1Q96IX9 119 aa6.6□□□□□ -1.35
CLK1-212ENST00000482590 CNDP1Q96KN2 507 aa6.6□□□□□ -1.35
CLK1-212ENST00000482590 RAB3IPQ96QF0 476 aaPredicted RBP6.6□□□□□ -1.35
CLK1-212ENST00000482590 ACCSQ96QU6 501 aa6.6□□□□□ -1.35
CLK1-212ENST00000482590 FAM213AQ9BRX8 229 aa6.6□□□□□ -1.35
CLK1-212ENST00000482590 SLC46A2Q9BY10 475 aa6.6□□□□□ -1.35
CLK1-212ENST00000482590 ENKD1Q9H0I2 346 aa6.6□□□□□ -1.35
CLK1-212ENST00000482590 PCDHAC1Q9H158 963 aa6.6□□□□□ -1.35
CLK1-212ENST00000482590 TOR3AQ9H497 397 aa6.6□□□□□ -1.35
CLK1-212ENST00000482590 EBF3Q9H4W6 596 aa6.6□□□□□ -1.35
CLK1-212ENST00000482590 SYNPO2LQ9H987 977 aa6.6□□□□□ -1.35
CLK1-212ENST00000482590 SNX15Q9NRS6 342 aa6.6□□□□□ -1.35
CLK1-212ENST00000482590 GKN1Q9NS71 199 aa6.6□□□□□ -1.35
CLK1-212ENST00000482590 RBAKQ9NYW8 714 aaPredicted RBP6.6□□□□□ -1.35
CLK1-212ENST00000482590 MRPL15Q9P015 296 aaKnown RBP6.6□□□□□ -1.35
CLK1-212ENST00000482590 TBC1D7Q9P0N9 293 aa6.6□□□□□ -1.35
CLK1-212ENST00000482590 MARCH4Q9P2E8 410 aaPredicted RBP6.6□□□□□ -1.35
CLK1-212ENST00000482590 CCL26Q9Y258 94 aa6.6□□□□□ -1.35
CLK1-212ENST00000482590 STYXL1Q9Y6J8 313 aa6.6□□□□□ -1.35
CLK1-212ENST00000482590 LAMA1P25391 3075 aa6.6□□□□□ -1.35
CLK1-212ENST00000482590 TRAV19A0A0A6YYK7 116 aa6.59□□□□□ -1.35
CLK1-212ENST00000482590 ZAR1LA6NP61 321 aa6.59□□□□□ -1.35
CLK1-212ENST00000482590 A8MVJ9 347 aa6.59□□□□□ -1.35
CLK1-212ENST00000482590 AHRRA9YTQ3 701 aa6.59□□□□□ -1.35
CLK1-212ENST00000482590 K7EPI3 171 aa6.59□□□□□ -1.35
CLK1-212ENST00000482590 PCDH17O14917 1159 aa6.59□□□□□ -1.35
CLK1-212ENST00000482590 EXTL3O43909 919 aa6.59□□□□□ -1.35
CLK1-212ENST00000482590 OPHN1O60890 802 aa6.59□□□□□ -1.35
CLK1-212ENST00000482590 NOL3O60936 208 aaKnown RBP6.59□□□□□ -1.35
CLK1-212ENST00000482590 PHF2O75151 1096 aa6.59□□□□□ -1.35
CLK1-212ENST00000482590 AKAP3O75969 853 aa6.59□□□□□ -1.35
CLK1-212ENST00000482590 KRT38O76015 456 aa6.59□□□□□ -1.35
CLK1-212ENST00000482590 OPN1MWP04001 364 aa6.59□□□□□ -1.35
CLK1-212ENST00000482590 OPN1MW2P0DN77 364 aa6.59□□□□□ -1.35
CLK1-212ENST00000482590 OPN1MW3P0DN78 364 aa6.59□□□□□ -1.35
CLK1-212ENST00000482590 DRD1P21728 446 aa6.59□□□□□ -1.35
CLK1-212ENST00000482590 ACAT1P24752 427 aaKnown RBP6.59□□□□□ -1.35
CLK1-212ENST00000482590 ANXA13P27216 316 aa6.59□□□□□ -1.35
CLK1-212ENST00000482590 PCSK1P29120 753 aa6.59□□□□□ -1.35
CLK1-212ENST00000482590 HOXA6P31267 233 aa6.59□□□□□ -1.35
CLK1-212ENST00000482590 GARSP41250 739 aaKnown RBP6.59□□□□□ -1.35
CLK1-212ENST00000482590 STAT6P42226 847 aa6.59□□□□□ -1.35
CLK1-212ENST00000482590 CD151P48509 253 aa6.59□□□□□ -1.35
CLK1-212ENST00000482590 PXNP49023 591 aaPredicted RBP6.59□□□□□ -1.35
CLK1-212ENST00000482590 ARFIP1P53367 373 aa6.59□□□□□ -1.35
CLK1-212ENST00000482590 ALDH18A1P54886 795 aaKnown RBP6.59□□□□□ -1.35
CLK1-212ENST00000482590 SOX8P57073 446 aa6.59□□□□□ -1.35
CLK1-212ENST00000482590 PTP4A2Q12974 167 aa6.59□□□□□ -1.35
CLK1-212ENST00000482590 CBX3Q13185 183 aa6.59□□□□□ -1.35
CLK1-212ENST00000482590 RAB32Q13637 225 aa6.59□□□□□ -1.35
CLK1-212ENST00000482590 ZNF268Q14587 947 aaPredicted RBP6.59□□□□□ -1.35
CLK1-212ENST00000482590 LASP1Q14847 261 aaKnown RBP6.59□□□□□ -1.35
CLK1-212ENST00000482590 FBXO43Q4G163 708 aa6.59□□□□□ -1.35
CLK1-212ENST00000482590 TMEM196Q5HYL7 178 aa6.59□□□□□ -1.35
CLK1-212ENST00000482590 FAXCQ5TGI0 409 aa6.59□□□□□ -1.35
CLK1-212ENST00000482590 SDHAF4Q5VUM1 108 aa6.59□□□□□ -1.35
CLK1-212ENST00000482590 TXNDC8Q6A555 127 aa6.59□□□□□ -1.35
CLK1-212ENST00000482590 TRAT1Q6PIZ9 186 aa6.59□□□□□ -1.35
CLK1-212ENST00000482590 OLFML1Q6UWY5 402 aa6.59□□□□□ -1.35
CLK1-212ENST00000482590 CRELD2Q6UXH1 353 aaPredicted RBP6.59□□□□□ -1.35
CLK1-212ENST00000482590 PLEKHM3Q6ZWE6 761 aa6.59□□□□□ -1.35
CLK1-212ENST00000482590 STXBP4Q6ZWJ1 553 aa6.59□□□□□ -1.35
CLK1-212ENST00000482590 ZNF720Q7Z2F6 126 aa6.59□□□□□ -1.35
CLK1-212ENST00000482590 MON1AQ86VX9 555 aa6.59□□□□□ -1.35
CLK1-212ENST00000482590 FAM90A1Q86YD7 464 aa6.59□□□□□ -1.35
CLK1-212ENST00000482590 ADGRF2Q8IZF7 708 aa6.59□□□□□ -1.35
CLK1-212ENST00000482590 GPD1LQ8N335 351 aa6.59□□□□□ -1.35
CLK1-212ENST00000482590 PDCL2Q8N4E4 241 aa6.59□□□□□ -1.35
CLK1-212ENST00000482590 WDTC1Q8N5D0 677 aa6.59□□□□□ -1.35
CLK1-212ENST00000482590 LRRC52Q8N7C0 313 aa6.59□□□□□ -1.35
CLK1-212ENST00000482590 DCBLD1Q8N8Z6 715 aa6.59□□□□□ -1.35
CLK1-212ENST00000482590 POGLUT1Q8NBL1 392 aa6.59□□□□□ -1.35
CLK1-212ENST00000482590 RPLP0P6Q8NHW5 317 aa6.59□□□□□ -1.35
CLK1-212ENST00000482590 CCDC26Q8TAB7 109 aa6.59□□□□□ -1.35
CLK1-212ENST00000482590 SPATA20Q8TB22 786 aa6.59□□□□□ -1.35
CLK1-212ENST00000482590 ZNF75CPQ92670 426 aaPredicted RBP6.59□□□□□ -1.35
CLK1-212ENST00000482590 HOXB13Q92826 284 aaPredicted RBP6.59□□□□□ -1.35
CLK1-212ENST00000482590 EPSTI1Q96J88 318 aa6.59□□□□□ -1.35
CLK1-212ENST00000482590 LRRC3BQ96PB8 259 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms