RNA–Protein interactions for RNA: ENST00000482158.1

SF3B1-210, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 772 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-210ENST00000482158 VPREB1P12018 145 aa5.47□□□□□ -1.53
SF3B1-210ENST00000482158 SNRPEP62304 92 aaKnown RBP5.47□□□□□ -1.53
SF3B1-210ENST00000482158 PLIN5Q00G26 463 aa5.47□□□□□ -1.53
SF3B1-210ENST00000482158 EEF1A2Q05639 463 aaKnown RBP5.47□□□□□ -1.53
SF3B1-210ENST00000482158 COASYQ13057 564 aa5.47□□□□□ -1.53
SF3B1-210ENST00000482158 CBWD6Q4V339 395 aa5.47□□□□□ -1.53
SF3B1-210ENST00000482158 CBWD3Q5JTY5 395 aa5.47□□□□□ -1.53
SF3B1-210ENST00000482158 C9orf152Q5JTZ5 239 aa5.47□□□□□ -1.53
SF3B1-210ENST00000482158 PLXDC2Q6UX71 529 aa5.47□□□□□ -1.53
SF3B1-210ENST00000482158 ZNF595Q8IYB9 648 aa5.47□□□□□ -1.53
SF3B1-210ENST00000482158 GBGT1Q8N5D6 347 aa5.47□□□□□ -1.53
SF3B1-210ENST00000482158 CFAP61Q8NHU2 1237 aa5.47□□□□□ -1.53
SF3B1-210ENST00000482158 FAM84BQ96KN1 310 aaPredicted RBP5.47□□□□□ -1.53
SF3B1-210ENST00000482158 IL17FQ96PD4 163 aa5.47□□□□□ -1.53
SF3B1-210ENST00000482158 NEK1Q96PY6 1258 aa5.47□□□□□ -1.53
SF3B1-210ENST00000482158 OR6C1Q96RD1 312 aa5.47□□□□□ -1.53
SF3B1-210ENST00000482158 NEURL2Q9BR09 285 aa5.47□□□□□ -1.53
SF3B1-210ENST00000482158 OLAHQ9NV23 265 aa5.47□□□□□ -1.53
SF3B1-210ENST00000482158 HAO2Q9NYQ3 351 aa5.47□□□□□ -1.53
SF3B1-210ENST00000482158 RHCGQ9UBD6 479 aa5.47□□□□□ -1.53
SF3B1-210ENST00000482158 GIMAP2Q9UG22 337 aa5.47□□□□□ -1.53
SF3B1-210ENST00000482158 IGKV2D-30A0A075B6S6 120 aa5.46□□□□□ -1.54
SF3B1-210ENST00000482158 TCRBV21S2A2A0A5A6 115 aa5.46□□□□□ -1.54
SF3B1-210ENST00000482158 H0YIN7 160 aa5.46□□□□□ -1.54
SF3B1-210ENST00000482158 SPRY1O43609 319 aaPredicted RBP5.46□□□□□ -1.54
SF3B1-210ENST00000482158 DNASE1P24855 282 aa5.46□□□□□ -1.54
SF3B1-210ENST00000482158 GABRA5P31644 462 aa5.46□□□□□ -1.54
SF3B1-210ENST00000482158 AMPHP49418 695 aa5.46□□□□□ -1.54
SF3B1-210ENST00000482158 ALCAMQ13740 583 aa5.46□□□□□ -1.54
SF3B1-210ENST00000482158 LCE1AQ5T7P2 110 aa5.46□□□□□ -1.54
SF3B1-210ENST00000482158 FAM171BQ6P995 826 aa5.46□□□□□ -1.54
SF3B1-210ENST00000482158 FIGLAQ6QHK4 219 aa5.46□□□□□ -1.54
SF3B1-210ENST00000482158 UNQ6126/PRO20091Q6UXV3 157 aa5.46□□□□□ -1.54
SF3B1-210ENST00000482158 TUBA1AQ71U36 451 aa5.46□□□□□ -1.54
SF3B1-210ENST00000482158 ZBTB8BQ8NAP8 495 aaPredicted RBP5.46□□□□□ -1.54
SF3B1-210ENST00000482158 SPATA20Q8TB22 786 aa5.46□□□□□ -1.54
SF3B1-210ENST00000482158 ZFAND2BQ8WV99 257 aa5.46□□□□□ -1.54
SF3B1-210ENST00000482158 IGSF21Q96ID5 467 aa5.46□□□□□ -1.54
SF3B1-210ENST00000482158 PRMT6Q96LA8 375 aaPredicted RBP5.46□□□□□ -1.54
SF3B1-210ENST00000482158 LINC00615Q96LM1 132 aaPredicted RBP5.46□□□□□ -1.54
SF3B1-210ENST00000482158 ZNF830Q96NB3 372 aaPredicted RBP5.46□□□□□ -1.54
SF3B1-210ENST00000482158 TUBA1CQ9BQE3 449 aa5.46□□□□□ -1.54
SF3B1-210ENST00000482158 ANKRD2Q9GZV1 360 aa5.46□□□□□ -1.54
SF3B1-210ENST00000482158 YIPF1Q9Y548 306 aa5.46□□□□□ -1.54
SF3B1-210ENST00000482158 TEX13DA0A0J9YY54 714 aaPredicted RBP5.45□□□□□ -1.54
SF3B1-210ENST00000482158 PLSCR5A0PG75 271 aa5.45□□□□□ -1.54
SF3B1-210ENST00000482158 ASPDHA6ND91 283 aa5.45□□□□□ -1.54
SF3B1-210ENST00000482158 ANKRD66B4E2M5 251 aa5.45□□□□□ -1.54
SF3B1-210ENST00000482158 SSX4O60224 188 aa5.45□□□□□ -1.54
SF3B1-210ENST00000482158 PRAMEF11O60813 436 aa5.45□□□□□ -1.54
SF3B1-210ENST00000482158 FGF3P11487 239 aaPredicted RBP5.45□□□□□ -1.54
SF3B1-210ENST00000482158 CAPZA2P47755 286 aa5.45□□□□□ -1.54
SF3B1-210ENST00000482158 CCR3P51677 355 aa5.45□□□□□ -1.54
SF3B1-210ENST00000482158 PNRC1Q12796 327 aaPredicted RBP5.45□□□□□ -1.54
SF3B1-210ENST00000482158 PRPF4BQ13523 1007 aaKnown RBP5.45□□□□□ -1.54
SF3B1-210ENST00000482158 SNAPC1Q16533 368 aa5.45□□□□□ -1.54
SF3B1-210ENST00000482158 CRY2Q49AN0 593 aa5.45□□□□□ -1.54
SF3B1-210ENST00000482158 ZNF628Q5EBL2 1059 aa5.45□□□□□ -1.54
SF3B1-210ENST00000482158 DSG4Q86SJ6 1040 aa5.45□□□□□ -1.54
SF3B1-210ENST00000482158 TC2NQ8N9U0 490 aa5.45□□□□□ -1.54
SF3B1-210ENST00000482158 OR2AJ1Q8NGZ0 328 aa5.45□□□□□ -1.54
SF3B1-210ENST00000482158 SMPDL3BQ92485 455 aa5.45□□□□□ -1.54
SF3B1-210ENST00000482158 DUX5Q96PT3 197 aa5.45□□□□□ -1.54
SF3B1-210ENST00000482158 PKP4Q99569 1192 aa5.45□□□□□ -1.54
SF3B1-210ENST00000482158 SLX1AQ9BQ83 275 aa5.45□□□□□ -1.54
SF3B1-210ENST00000482158 OR10A4Q9H209 315 aa5.45□□□□□ -1.54
SF3B1-210ENST00000482158 NPAP1Q9NZP6 1156 aa5.45□□□□□ -1.54
SF3B1-210ENST00000482158 PCDHGB1Q9Y5G3 927 aa5.45□□□□□ -1.54
SF3B1-210ENST00000482158 A0A1B0GUV1 79 aa5.44□□□□□ -1.54
SF3B1-210ENST00000482158 PRSS51A0A1B0GVH4 220 aa5.44□□□□□ -1.54
SF3B1-210ENST00000482158 TRBC2A0A5B9 178 aa5.44□□□□□ -1.54
SF3B1-210ENST00000482158 URADA6NGE7 173 aa5.44□□□□□ -1.54
SF3B1-210ENST00000482158 SMTNL1A8MU46 457 aa5.44□□□□□ -1.54
SF3B1-210ENST00000482158 A8MXE2 369 aa5.44□□□□□ -1.54
SF3B1-210ENST00000482158 DVL1O14640 695 aa5.44□□□□□ -1.54
SF3B1-210ENST00000482158 DKC1O60832 514 aaKnown RBP eCLIP5.44□□□□□ -1.54
SF3B1-210ENST00000482158 BMP10O95393 424 aa5.44□□□□□ -1.54
SF3B1-210ENST00000482158 SNRNP70P08621 437 aaKnown RBP5.44□□□□□ -1.54
SF3B1-210ENST00000482158 MMP15P51511 669 aa5.44□□□□□ -1.54
SF3B1-210ENST00000482158 ZNF132P52740 706 aa5.44□□□□□ -1.54
SF3B1-210ENST00000482158 HNRNPKP61978 463 aaKnown RBP eCLIP5.44□□□□□ -1.54
SF3B1-210ENST00000482158 EEF1A1P68104 462 aaKnown RBP5.44□□□□□ -1.54
SF3B1-210ENST00000482158 RPL24P83731 157 aaKnown RBP5.44□□□□□ -1.54
SF3B1-210ENST00000482158 CDK3Q00526 305 aa5.44□□□□□ -1.54
SF3B1-210ENST00000482158 IZUMO4Q1ZYL8 232 aa5.44□□□□□ -1.54
SF3B1-210ENST00000482158 GCNT6Q5T4J0 391 aa5.44□□□□□ -1.54
SF3B1-210ENST00000482158 EEF1A1P5Q5VTE0 462 aa5.44□□□□□ -1.54
SF3B1-210ENST00000482158 PLEKHM3Q6ZWE6 761 aa5.44□□□□□ -1.54
SF3B1-210ENST00000482158 CAMKMTQ7Z624 323 aa5.44□□□□□ -1.54
SF3B1-210ENST00000482158 MUC20Q8N307 709 aaPredicted RBP5.44□□□□□ -1.54
SF3B1-210ENST00000482158 AFAP1Q8N556 730 aa5.44□□□□□ -1.54
SF3B1-210ENST00000482158 PPP4R1Q8TF05 950 aa5.44□□□□□ -1.54
SF3B1-210ENST00000482158 LINGO1Q96FE5 620 aa5.44□□□□□ -1.54
SF3B1-210ENST00000482158 OXNAD1Q96HP4 312 aaPredicted RBP5.44□□□□□ -1.54
SF3B1-210ENST00000482158 RADILQ96JH8 1075 aa5.44□□□□□ -1.54
SF3B1-210ENST00000482158 FAM81BQ96LP2 452 aa5.44□□□□□ -1.54
SF3B1-210ENST00000482158 HHATLQ9HCP6 504 aa5.44□□□□□ -1.54
SF3B1-210ENST00000482158 CCDC177Q9NQR7 707 aaPredicted RBP5.44□□□□□ -1.54
SF3B1-210ENST00000482158 A0A1W2PPM1 405 aa5.43□□□□□ -1.54
SF3B1-210ENST00000482158 BUD23O43709 281 aaKnown RBP5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms