RNA–Protein interactions for RNA: ENST00000481641.1

CLK1-211, Transcript of CDC like kinase 1, humanhuman

TSL 4

Gene CLK1, Length 690 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-211ENST00000481641 CCDC66A2RUB6 948 aa18.16■□□□□ 0.5
CLK1-211ENST00000481641 GRID2IPA4D2P6 1211 aa18.16■□□□□ 0.5
CLK1-211ENST00000481641 C2orf81A6NN90 581 aa18.16■□□□□ 0.5
CLK1-211ENST00000481641 CCL22O00626 93 aa18.16■□□□□ 0.5
CLK1-211ENST00000481641 TOX3O15405 576 aaPredicted RBP18.16■□□□□ 0.5
CLK1-211ENST00000481641 SRP72O76094 671 aaKnown RBP18.16■□□□□ 0.5
CLK1-211ENST00000481641 KIAA0754O94854 1291 aa18.16■□□□□ 0.5
CLK1-211ENST00000481641 OAS2P29728 719 aaKnown RBP18.16■□□□□ 0.5
CLK1-211ENST00000481641 PTPN7P35236 360 aa18.16■□□□□ 0.5
CLK1-211ENST00000481641 STAT5AP42229 794 aa18.16■□□□□ 0.5
CLK1-211ENST00000481641 POLE2P56282 527 aa18.16■□□□□ 0.5
CLK1-211ENST00000481641 XIAPP98170 497 aa18.16■□□□□ 0.5
CLK1-211ENST00000481641 LONRF2Q1L5Z9 754 aa18.16■□□□□ 0.5
CLK1-211ENST00000481641 METRNLQ641Q3 311 aa18.16■□□□□ 0.5
CLK1-211ENST00000481641 C16orf46Q6P387 395 aa18.16■□□□□ 0.5
CLK1-211ENST00000481641 RASGRP3Q8IV61 690 aa18.16■□□□□ 0.5
CLK1-211ENST00000481641 LRRC57Q8N9N7 239 aa18.16■□□□□ 0.5
CLK1-211ENST00000481641 GALNT6Q8NCL4 622 aa18.16■□□□□ 0.5
CLK1-211ENST00000481641 KLHL6Q8WZ60 621 aa18.16■□□□□ 0.5
CLK1-211ENST00000481641 ZDHHC12Q96GR4 267 aa18.16■□□□□ 0.5
CLK1-211ENST00000481641 MRFAP1L1Q96HT8 127 aa18.16■□□□□ 0.5
CLK1-211ENST00000481641 INSM2Q96T92 566 aaPredicted RBP18.16■□□□□ 0.5
CLK1-211ENST00000481641 WWP1Q9H0M0 922 aa18.16■□□□□ 0.5
CLK1-211ENST00000481641 SLC25A18Q9H1K4 315 aa18.16■□□□□ 0.5
CLK1-211ENST00000481641 TRIT1Q9H3H1 467 aaKnown RBP18.16■□□□□ 0.5
CLK1-211ENST00000481641 IMP3Q9NV31 184 aaKnown RBP18.16■□□□□ 0.5
CLK1-211ENST00000481641 EPHA6Q9UF33 1036 aa18.16■□□□□ 0.5
CLK1-211ENST00000481641 DNMT3AQ9Y6K1 912 aaPredicted RBP18.16■□□□□ 0.5
CLK1-211ENST00000481641 RPS6KL1Q9Y6S9 549 aa18.16■□□□□ 0.5
CLK1-211ENST00000481641 A0A0U1RQJ8 604 aa18.15■□□□□ 0.5
CLK1-211ENST00000481641 SGTAO43765 313 aa18.15■□□□□ 0.5
CLK1-211ENST00000481641 SFTPCP11686 197 aa18.15■□□□□ 0.5
CLK1-211ENST00000481641 CDC20Q12834 499 aa18.15■□□□□ 0.5
CLK1-211ENST00000481641 PRPSAP1Q14558 356 aa18.15■□□□□ 0.5
CLK1-211ENST00000481641 KCNAB1Q14722 419 aa18.15■□□□□ 0.5
CLK1-211ENST00000481641 PLCL1Q15111 1095 aa18.15■□□□□ 0.5
CLK1-211ENST00000481641 DENND5AQ6IQ26 1287 aa18.15■□□□□ 0.5
CLK1-211ENST00000481641 C6orf15Q6UXA7 325 aaPredicted RBP18.15■□□□□ 0.5
CLK1-211ENST00000481641 CERS6Q6ZMG9 384 aa18.15■□□□□ 0.5
CLK1-211ENST00000481641 PTRH1Q86Y79 214 aaKnown RBP18.15■□□□□ 0.5
CLK1-211ENST00000481641 ESX1Q8N693 406 aa18.15■□□□□ 0.5
CLK1-211ENST00000481641 LILRA3Q8N6C8 439 aaPredicted RBP18.15■□□□□ 0.5
CLK1-211ENST00000481641 SPDYE1Q8NFV5 336 aaPredicted RBP18.15■□□□□ 0.5
CLK1-211ENST00000481641 STARD8Q92502 1023 aa18.15■□□□□ 0.5
CLK1-211ENST00000481641 C12orf66Q96MD2 445 aa18.15■□□□□ 0.5
CLK1-211ENST00000481641 SPATA13Q96N96 652 aa18.15■□□□□ 0.5
CLK1-211ENST00000481641 TBL1YQ9BQ87 522 aa18.15■□□□□ 0.5
CLK1-211ENST00000481641 FERMT1Q9BQL6 677 aa18.15■□□□□ 0.5
CLK1-211ENST00000481641 PACSIN2Q9UNF0 486 aaPredicted RBP18.15■□□□□ 0.5
CLK1-211ENST00000481641 AAR2Q9Y312 384 aaKnown RBP18.15■□□□□ 0.5
CLK1-211ENST00000481641 MYO18BQ8IUG5 2567 aa18.14■□□□□ 0.49
CLK1-211ENST00000481641 ASH1LQ9NR48 2969 aaKnown RBP18.14■□□□□ 0.49
CLK1-211ENST00000481641 C5orf60A6NFR6 353 aa18.14■□□□□ 0.49
CLK1-211ENST00000481641 MGAT4DA6NG13 374 aa18.14■□□□□ 0.49
CLK1-211ENST00000481641 BTNL10A8MVZ5 291 aa18.14■□□□□ 0.49
CLK1-211ENST00000481641 SPAG6O75602 509 aa18.14■□□□□ 0.49
CLK1-211ENST00000481641 STK10O94804 968 aaKnown RBP18.14■□□□□ 0.49
CLK1-211ENST00000481641 TJP3O95049 919 aa18.14■□□□□ 0.49
CLK1-211ENST00000481641 IPO7O95373 1038 aaKnown RBP18.14■□□□□ 0.49
CLK1-211ENST00000481641 TIAF1O95411 115 aa18.14■□□□□ 0.49
CLK1-211ENST00000481641 POLBP06746 335 aa18.14■□□□□ 0.49
CLK1-211ENST00000481641 MTHFD1P11586 935 aaKnown RBP18.14■□□□□ 0.49
CLK1-211ENST00000481641 NELFEP18615 380 aaKnown RBP18.14■□□□□ 0.49
CLK1-211ENST00000481641 CCR10P46092 362 aa18.14■□□□□ 0.49
CLK1-211ENST00000481641 VAV2P52735 878 aa18.14■□□□□ 0.49
CLK1-211ENST00000481641 KCNAB2Q13303 367 aa18.14■□□□□ 0.49
CLK1-211ENST00000481641 DEFB109BQ30KR1 87 aa18.14■□□□□ 0.49
CLK1-211ENST00000481641 OR2L2Q8NH16 312 aa18.14■□□□□ 0.49
CLK1-211ENST00000481641 MAP3K3Q99759 626 aa18.14■□□□□ 0.49
CLK1-211ENST00000481641 RAB33BQ9H082 229 aa18.14■□□□□ 0.49
CLK1-211ENST00000481641 LNPEPQ9UIQ6 1025 aa18.14■□□□□ 0.49
CLK1-211ENST00000481641 CRLS1Q9UJA2 301 aa18.14■□□□□ 0.49
CLK1-211ENST00000481641 CROTQ9UKG9 612 aa18.14■□□□□ 0.49
CLK1-211ENST00000481641 SUV39H1O43463 412 aa18.13■□□□□ 0.49
CLK1-211ENST00000481641 FGF5P12034 268 aa18.13■□□□□ 0.49
CLK1-211ENST00000481641 FOLR1P15328 257 aa18.13■□□□□ 0.49
CLK1-211ENST00000481641 DLSTP36957 453 aa18.13■□□□□ 0.49
CLK1-211ENST00000481641 ARCN1P48444 511 aaKnown RBP18.13■□□□□ 0.49
CLK1-211ENST00000481641 CDKN1CP49918 316 aaPredicted RBP18.13■□□□□ 0.49
CLK1-211ENST00000481641 ZNF140P52738 457 aaPredicted RBP18.13■□□□□ 0.49
CLK1-211ENST00000481641 MAP7Q14244 749 aa18.13■□□□□ 0.49
CLK1-211ENST00000481641 IL11RAQ14626 422 aa18.13■□□□□ 0.49
CLK1-211ENST00000481641 KIAA1328Q86T90 577 aa18.13■□□□□ 0.49
CLK1-211ENST00000481641 ZNF514Q96K75 400 aaPredicted RBP18.13■□□□□ 0.49
CLK1-211ENST00000481641 CALR3Q96L12 384 aaKnown RBP18.13■□□□□ 0.49
CLK1-211ENST00000481641 RMDN2Q96LZ7 410 aa18.13■□□□□ 0.49
CLK1-211ENST00000481641 CATSPER2Q96P56 530 aa18.13■□□□□ 0.49
CLK1-211ENST00000481641 EFHD1Q9BUP0 239 aa18.13■□□□□ 0.49
CLK1-211ENST00000481641 ADNPQ9H2P0 1102 aa18.13■□□□□ 0.49
CLK1-211ENST00000481641 WISP1O95388 367 aa18.12■□□□□ 0.49
CLK1-211ENST00000481641 CRTAMO95727 393 aa18.12■□□□□ 0.49
CLK1-211ENST00000481641 EBLN1P0CF75 366 aa18.12■□□□□ 0.49
CLK1-211ENST00000481641 PRSS56P0CW18 603 aa18.12■□□□□ 0.49
CLK1-211ENST00000481641 TPH1P17752 444 aa18.12■□□□□ 0.49
CLK1-211ENST00000481641 TCN2P20062 427 aa18.12■□□□□ 0.49
CLK1-211ENST00000481641 CETN2P41208 172 aa18.12■□□□□ 0.49
CLK1-211ENST00000481641 BCL7AQ4VC05 210 aa18.12■□□□□ 0.49
CLK1-211ENST00000481641 FBXO38Q6PIJ6 1188 aa18.12■□□□□ 0.49
CLK1-211ENST00000481641 ATG14Q6ZNE5 492 aa18.12■□□□□ 0.49
CLK1-211ENST00000481641 PPP1R3BQ86XI6 285 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms