RNA–Protein interactions for RNA: ENST00000480658.5

CCM2-213, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,136 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-213ENST00000480658 CCDC110Q8TBZ0 833 aa11.22□□□□□ -0.61
CCM2-213ENST00000480658 MAIP1Q8WWC4 291 aa11.22□□□□□ -0.61
CCM2-213ENST00000480658 ALG3Q92685 438 aa11.22□□□□□ -0.61
CCM2-213ENST00000480658 PEX13Q92968 403 aa11.22□□□□□ -0.61
CCM2-213ENST00000480658 HES6Q96HZ4 224 aa11.22□□□□□ -0.61
CCM2-213ENST00000480658 SLC45A3Q96JT2 553 aa11.22□□□□□ -0.61
CCM2-213ENST00000480658 TSSK1BQ9BXA7 367 aa11.22□□□□□ -0.61
CCM2-213ENST00000480658 TBC1D10AQ9BXI6 508 aa11.22□□□□□ -0.61
CCM2-213ENST00000480658 ULBP3Q9BZM4 244 aa11.22□□□□□ -0.61
CCM2-213ENST00000480658 LACRTQ9GZZ8 138 aa11.22□□□□□ -0.61
CCM2-213ENST00000480658 SYTL2Q9HCH5 934 aa11.22□□□□□ -0.61
CCM2-213ENST00000480658 ARFGAP3Q9NP61 516 aa11.22□□□□□ -0.61
CCM2-213ENST00000480658 TMEM9Q9P0T7 183 aa11.22□□□□□ -0.61
CCM2-213ENST00000480658 ZNF624Q9P2J8 865 aaPredicted RBP11.22□□□□□ -0.61
CCM2-213ENST00000480658 SLC23A2Q9UGH3 650 aa11.22□□□□□ -0.61
CCM2-213ENST00000480658 PILRAQ9UKJ1 303 aa11.22□□□□□ -0.61
CCM2-213ENST00000480658 PTPRQQ9UMZ3 2332 aa11.22□□□□□ -0.61
CCM2-213ENST00000480658 REXO2Q9Y3B8 237 aaKnown RBP11.22□□□□□ -0.61
CCM2-213ENST00000480658 PCDHB3Q9Y5E6 796 aa11.22□□□□□ -0.61
CCM2-213ENST00000480658 HEMK1Q9Y5R4 338 aaPredicted RBP11.22□□□□□ -0.61
CCM2-213ENST00000480658 DUSP10Q9Y6W6 482 aa11.22□□□□□ -0.61
CCM2-213ENST00000480658 RCCD1A6NED2 376 aa11.21□□□□□ -0.61
CCM2-213ENST00000480658 GOLGA6L3A6NEY3 463 aa11.21□□□□□ -0.61
CCM2-213ENST00000480658 TLCD2A6NGC4 264 aa11.21□□□□□ -0.61
CCM2-213ENST00000480658 OR52A4PA6NMU1 304 aa11.21□□□□□ -0.61
CCM2-213ENST00000480658 A8MU76 341 aa11.21□□□□□ -0.61
CCM2-213ENST00000480658 B8ZZF3 427 aa11.21□□□□□ -0.61
CCM2-213ENST00000480658 STK17BO94768 372 aa11.21□□□□□ -0.61
CCM2-213ENST00000480658 AP2A1O95782 977 aa11.21□□□□□ -0.61
CCM2-213ENST00000480658 ATP1B2P14415 290 aaPredicted RBP11.21□□□□□ -0.61
CCM2-213ENST00000480658 BRAFP15056 766 aa11.21□□□□□ -0.61
CCM2-213ENST00000480658 CD151P48509 253 aa11.21□□□□□ -0.61
CCM2-213ENST00000480658 ZNF140P52738 457 aaPredicted RBP11.21□□□□□ -0.61
CCM2-213ENST00000480658 CACNG1Q06432 222 aa11.21□□□□□ -0.61
CCM2-213ENST00000480658 FOXM1Q08050 763 aa11.21□□□□□ -0.61
CCM2-213ENST00000480658 CDH17Q12864 832 aa11.21□□□□□ -0.61
CCM2-213ENST00000480658 SEPT6Q14141 434 aa11.21□□□□□ -0.61
CCM2-213ENST00000480658 GSE1Q14687 1217 aa11.21□□□□□ -0.61
CCM2-213ENST00000480658 TGIF1Q15583 401 aa11.21□□□□□ -0.61
CCM2-213ENST00000480658 RPE65Q16518 533 aa11.21□□□□□ -0.61
CCM2-213ENST00000480658 DNTTIP2Q5QJE6 756 aaKnown RBP11.21□□□□□ -0.61
CCM2-213ENST00000480658 TMTC4Q5T4D3 741 aa11.21□□□□□ -0.61
CCM2-213ENST00000480658 ZNF648Q5T619 568 aaPredicted RBP11.21□□□□□ -0.61
CCM2-213ENST00000480658 CACHD1Q5VU97 1274 aa11.21□□□□□ -0.61
CCM2-213ENST00000480658 IRGCQ6NXR0 463 aa11.21□□□□□ -0.61
CCM2-213ENST00000480658 PPP1R3BQ86XI6 285 aa11.21□□□□□ -0.61
CCM2-213ENST00000480658 STYXQ8WUJ0 223 aa11.21□□□□□ -0.61
CCM2-213ENST00000480658 STAMBPL1Q96FJ0 436 aa11.21□□□□□ -0.61
CCM2-213ENST00000480658 TGM7Q96PF1 710 aa11.21□□□□□ -0.61
CCM2-213ENST00000480658 KIR3DX1Q9H7L2 352 aa11.21□□□□□ -0.61
CCM2-213ENST00000480658 HOMER3Q9NSC5 361 aa11.21□□□□□ -0.61
CCM2-213ENST00000480658 IMP3Q9NV31 184 aaKnown RBP11.21□□□□□ -0.61
CCM2-213ENST00000480658 OCIAD1Q9NX40 245 aa11.21□□□□□ -0.61
CCM2-213ENST00000480658 SIDT1Q9NXL6 827 aaKnown RBP11.21□□□□□ -0.61
CCM2-213ENST00000480658 ZDHHC3Q9NYG2 299 aa11.21□□□□□ -0.61
CCM2-213ENST00000480658 SEMA5BQ9P283 1151 aa11.21□□□□□ -0.61
CCM2-213ENST00000480658 KLHL3Q9UH77 587 aa11.21□□□□□ -0.61
CCM2-213ENST00000480658 TFR2Q9UP52 801 aa11.21□□□□□ -0.61
CCM2-213ENST00000480658 ATRXP46100 2492 aa11.21□□□□□ -0.61
CCM2-213ENST00000480658 ARHGEF17Q96PE2 2063 aaPredicted RBP11.2□□□□□ -0.62
CCM2-213ENST00000480658 UBA6A0AVT1 1052 aaPredicted RBP11.2□□□□□ -0.62
CCM2-213ENST00000480658 HEATR9A2RTY3 570 aa11.2□□□□□ -0.62
CCM2-213ENST00000480658 OR5K3A6NET4 321 aa11.2□□□□□ -0.62
CCM2-213ENST00000480658 C21orf140B9A014 251 aa11.2□□□□□ -0.62
CCM2-213ENST00000480658 E7EVH7 732 aa11.2□□□□□ -0.62
CCM2-213ENST00000480658 F5H423 210 aaPredicted RBP11.2□□□□□ -0.62
CCM2-213ENST00000480658 GAPDHSO14556 408 aaPredicted RBP11.2□□□□□ -0.62
CCM2-213ENST00000480658 UGT1A9O60656 530 aa11.2□□□□□ -0.62
CCM2-213ENST00000480658 RECKO95980 971 aa11.2□□□□□ -0.62
CCM2-213ENST00000480658 FTH1P02794 183 aa11.2□□□□□ -0.62
CCM2-213ENST00000480658 CCDC175P0C221 793 aa11.2□□□□□ -0.62
CCM2-213ENST00000480658 FGF5P12034 268 aa11.2□□□□□ -0.62
CCM2-213ENST00000480658 TYRP1P17643 537 aa11.2□□□□□ -0.62
CCM2-213ENST00000480658 NELFEP18615 380 aaKnown RBP11.2□□□□□ -0.62
CCM2-213ENST00000480658 UGT1A6P19224 532 aa11.2□□□□□ -0.62
CCM2-213ENST00000480658 UGT1A1P22309 533 aa11.2□□□□□ -0.62
CCM2-213ENST00000480658 UGT1A4P22310 534 aa11.2□□□□□ -0.62
CCM2-213ENST00000480658 ACRV1P26436 265 aa11.2□□□□□ -0.62
CCM2-213ENST00000480658 MC4RP32245 332 aa11.2□□□□□ -0.62
CCM2-213ENST00000480658 NSG1P42857 185 aa11.2□□□□□ -0.62
CCM2-213ENST00000480658 CCR10P46092 362 aa11.2□□□□□ -0.62
CCM2-213ENST00000480658 LMAN1P49257 510 aa11.2□□□□□ -0.62
CCM2-213ENST00000480658 CTSCP53634 463 aa11.2□□□□□ -0.62
CCM2-213ENST00000480658 ITIH4Q14624 930 aa11.2□□□□□ -0.62
CCM2-213ENST00000480658 KHDC1Q4VXA5 237 aaKnown RBP11.2□□□□□ -0.62
CCM2-213ENST00000480658 AARS2Q5JTZ9 985 aaKnown RBP11.2□□□□□ -0.62
CCM2-213ENST00000480658 KIAA1614Q5VZ46 1190 aa11.2□□□□□ -0.62
CCM2-213ENST00000480658 ARMC3Q5W041 872 aa11.2□□□□□ -0.62
CCM2-213ENST00000480658 KCTD11Q693B1 232 aa11.2□□□□□ -0.62
CCM2-213ENST00000480658 CERS6Q6ZMG9 384 aa11.2□□□□□ -0.62
CCM2-213ENST00000480658 TMEM139Q8IV31 216 aa11.2□□□□□ -0.62
CCM2-213ENST00000480658 RASGRP3Q8IV61 690 aa11.2□□□□□ -0.62
CCM2-213ENST00000480658 CCDC89Q8N998 374 aa11.2□□□□□ -0.62
CCM2-213ENST00000480658 DNAAF3Q8N9W5 541 aa11.2□□□□□ -0.62
CCM2-213ENST00000480658 FAM71DQ8N9W8 422 aa11.2□□□□□ -0.62
CCM2-213ENST00000480658 ACVR1CQ8NER5 493 aa11.2□□□□□ -0.62
CCM2-213ENST00000480658 SLC35B2Q8TB61 432 aa11.2□□□□□ -0.62
CCM2-213ENST00000480658 KLHL6Q8WZ60 621 aa11.2□□□□□ -0.62
CCM2-213ENST00000480658 C12orf66Q96MD2 445 aa11.2□□□□□ -0.62
CCM2-213ENST00000480658 UGT1A7Q9HAW7 530 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms