RNA–Protein interactions for RNA: ENST00000479525.6

ECHDC1-216, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 1,368 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-216ENST00000479525 ITGA9Q13797 1035 aa17.02■□□□□ 0.31
ECHDC1-216ENST00000479525 DEFB109BQ30KR1 87 aa17.02■□□□□ 0.31
ECHDC1-216ENST00000479525 AGAP9Q5VTM2 703 aa17.02■□□□□ 0.31
ECHDC1-216ENST00000479525 ITPRIPL1Q6GPH6 555 aa17.02■□□□□ 0.31
ECHDC1-216ENST00000479525 RANBP10Q6VN20 620 aa17.02■□□□□ 0.31
ECHDC1-216ENST00000479525 TMTC1Q8IUR5 882 aa17.02■□□□□ 0.31
ECHDC1-216ENST00000479525 LRRC57Q8N9N7 239 aa17.02■□□□□ 0.31
ECHDC1-216ENST00000479525 MRFAP1L1Q96HT8 127 aa17.02■□□□□ 0.31
ECHDC1-216ENST00000479525 C12orf66Q96MD2 445 aa17.02■□□□□ 0.31
ECHDC1-216ENST00000479525 TEFMQ96QE5 360 aaKnown RBP17.02■□□□□ 0.31
ECHDC1-216ENST00000479525 RUFY1Q96T51 708 aa17.02■□□□□ 0.31
ECHDC1-216ENST00000479525 MAP3K3Q99759 626 aa17.02■□□□□ 0.31
ECHDC1-216ENST00000479525 TBL1YQ9BQ87 522 aa17.02■□□□□ 0.31
ECHDC1-216ENST00000479525 ZNF768Q9H5H4 540 aaKnown RBP17.02■□□□□ 0.31
ECHDC1-216ENST00000479525 UCK1Q9HA47 277 aa17.02■□□□□ 0.31
ECHDC1-216ENST00000479525 LUC7LQ9NQ29 371 aaKnown RBP17.02■□□□□ 0.31
ECHDC1-216ENST00000479525 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP17.02■□□□□ 0.313e-6■■■■□ 21.3
ECHDC1-216ENST00000479525 LNPEPQ9UIQ6 1025 aa17.02■□□□□ 0.31
ECHDC1-216ENST00000479525 TMEM184BQ9Y519 407 aaPredicted RBP17.02■□□□□ 0.31
ECHDC1-216ENST00000479525 ZNF891A8MT65 544 aaPredicted RBP17.01■□□□□ 0.31
ECHDC1-216ENST00000479525 SGTAO43765 313 aa17.01■□□□□ 0.31
ECHDC1-216ENST00000479525 ANXA9O76027 345 aa17.01■□□□□ 0.31
ECHDC1-216ENST00000479525 ANKRD34CP0C6C1 535 aa17.01■□□□□ 0.31
ECHDC1-216ENST00000479525 FECHP22830 423 aa17.01■□□□□ 0.31
ECHDC1-216ENST00000479525 VAV2P52735 878 aa17.01■□□□□ 0.31
ECHDC1-216ENST00000479525 GDF10P55107 478 aa17.01■□□□□ 0.31
ECHDC1-216ENST00000479525 POLE2P56282 527 aa17.01■□□□□ 0.31
ECHDC1-216ENST00000479525 COPS2P61201 443 aa17.01■□□□□ 0.31
ECHDC1-216ENST00000479525 XIAPP98170 497 aa17.01■□□□□ 0.31
ECHDC1-216ENST00000479525 CDC20Q12834 499 aa17.01■□□□□ 0.31
ECHDC1-216ENST00000479525 MSLNQ13421 630 aaPredicted RBP17.01■□□□□ 0.31
ECHDC1-216ENST00000479525 TAF1AQ15573 450 aaPredicted RBP17.01■□□□□ 0.31
ECHDC1-216ENST00000479525 KCTD19Q17RG1 926 aaPredicted RBP17.01■□□□□ 0.31
ECHDC1-216ENST00000479525 DENND5AQ6IQ26 1287 aa17.01■□□□□ 0.31
ECHDC1-216ENST00000479525 BORAQ6PGQ7 559 aa17.01■□□□□ 0.31
ECHDC1-216ENST00000479525 WASH2PQ6VEQ5 465 aa17.01■□□□□ 0.31
ECHDC1-216ENST00000479525 TMEM135Q86UB9 458 aa17.01■□□□□ 0.31
ECHDC1-216ENST00000479525 AVL9Q8NBF6 648 aa17.01■□□□□ 0.31
ECHDC1-216ENST00000479525 STARD8Q92502 1023 aa17.01■□□□□ 0.31
ECHDC1-216ENST00000479525 DNAJC1Q96KC8 554 aaKnown RBP17.01■□□□□ 0.31
ECHDC1-216ENST00000479525 SPATA13Q96N96 652 aa17.01■□□□□ 0.31
ECHDC1-216ENST00000479525 ZCCHC2Q9C0B9 1178 aaKnown RBP17.01■□□□□ 0.31
ECHDC1-216ENST00000479525 EPB41L1Q9H4G0 881 aa17.01■□□□□ 0.31
ECHDC1-216ENST00000479525 AKIRIN1Q9H9L7 192 aaPredicted RBP17.01■□□□□ 0.31
ECHDC1-216ENST00000479525 WASH6PQ9NQA3 447 aa17.01■□□□□ 0.31
ECHDC1-216ENST00000479525 ZNF71Q9NQZ8 489 aaPredicted RBP17.01■□□□□ 0.31
ECHDC1-216ENST00000479525 STARD5Q9NSY2 213 aa17.01■□□□□ 0.31
ECHDC1-216ENST00000479525 CRLS1Q9UJA2 301 aa17.01■□□□□ 0.31
ECHDC1-216ENST00000479525 CROTQ9UKG9 612 aa17.01■□□□□ 0.31
ECHDC1-216ENST00000479525 RPS6KL1Q9Y6S9 549 aa17.01■□□□□ 0.31
ECHDC1-216ENST00000479525 SPENQ96T58 3664 aaKnown RBP17■□□□□ 0.31
ECHDC1-216ENST00000479525 C2orf81A6NN90 581 aa17■□□□□ 0.31
ECHDC1-216ENST00000479525 KATNA1O75449 491 aa17■□□□□ 0.31
ECHDC1-216ENST00000479525 METTL18O95568 372 aa17■□□□□ 0.31
ECHDC1-216ENST00000479525 FURINP09958 794 aa17■□□□□ 0.31
ECHDC1-216ENST00000479525 EBLN1P0CF75 366 aa17■□□□□ 0.31
ECHDC1-216ENST00000479525 MTHFD1P11586 935 aaKnown RBP17■□□□□ 0.31
ECHDC1-216ENST00000479525 FOLR1P15328 257 aa17■□□□□ 0.31
ECHDC1-216ENST00000479525 MAP4P27816 1152 aaKnown RBP17■□□□□ 0.31
ECHDC1-216ENST00000479525 DLSTP36957 453 aa17■□□□□ 0.31
ECHDC1-216ENST00000479525 STAT5AP42229 794 aa17■□□□□ 0.31
ECHDC1-216ENST00000479525 SEPT6Q14141 434 aa17■□□□□ 0.31
ECHDC1-216ENST00000479525 TMEM139Q8IV31 216 aa17■□□□□ 0.31
ECHDC1-216ENST00000479525 FAM71DQ8N9W8 422 aa17■□□□□ 0.31
ECHDC1-216ENST00000479525 KIAA1143Q96AT1 154 aaPredicted RBP17■□□□□ 0.31
ECHDC1-216ENST00000479525 SLC45A3Q96JT2 553 aa17■□□□□ 0.31
ECHDC1-216ENST00000479525 RMDN2Q96LZ7 410 aa17■□□□□ 0.31
ECHDC1-216ENST00000479525 AMFRQ9UKV5 643 aa17■□□□□ 0.31
ECHDC1-216ENST00000479525 CCDC66A2RUB6 948 aa16.99■□□□□ 0.31
ECHDC1-216ENST00000479525 SPAG6O75602 509 aa16.99■□□□□ 0.31
ECHDC1-216ENST00000479525 IPO7O95373 1038 aaKnown RBP16.99■□□□□ 0.31
ECHDC1-216ENST00000479525 PTMAP06454 111 aaKnown RBP16.99■□□□□ 0.31
ECHDC1-216ENST00000479525 NR1D1P20393 614 aa16.99■□□□□ 0.31
ECHDC1-216ENST00000479525 MC4RP32245 332 aa16.99■□□□□ 0.31
ECHDC1-216ENST00000479525 ZNF140P52738 457 aaPredicted RBP16.99■□□□□ 0.31
ECHDC1-216ENST00000479525 DMPKQ09013 629 aa16.99■□□□□ 0.31
ECHDC1-216ENST00000479525 ABHD18Q0P651 414 aa16.99■□□□□ 0.31
ECHDC1-216ENST00000479525 ERV3-1Q14264 604 aa16.99■□□□□ 0.31
ECHDC1-216ENST00000479525 PRPSAP1Q14558 356 aa16.99■□□□□ 0.31
ECHDC1-216ENST00000479525 LONRF2Q1L5Z9 754 aa16.99■□□□□ 0.31
ECHDC1-216ENST00000479525 SKIDA1Q1XH10 827 aa16.99■□□□□ 0.31
ECHDC1-216ENST00000479525 ZDHHC20Q5W0Z9 365 aa16.99■□□□□ 0.31
ECHDC1-216ENST00000479525 PEX26Q7Z412 305 aa16.99■□□□□ 0.31
ECHDC1-216ENST00000479525 PRSS42Q7Z5A4 293 aa16.99■□□□□ 0.31
ECHDC1-216ENST00000479525 PRUNE1Q86TP1 453 aa16.99■□□□□ 0.31
ECHDC1-216ENST00000479525 CFAP206Q8IYR0 622 aa16.99■□□□□ 0.31
ECHDC1-216ENST00000479525 SMOXQ9NWM0 555 aa16.99■□□□□ 0.31
ECHDC1-216ENST00000479525 SNRNP200O75643 2136 aaKnown RBP16.99■□□□□ 0.31
ECHDC1-216ENST00000479525 CCDC88CQ9P219 2028 aa16.98■□□□□ 0.31
ECHDC1-216ENST00000479525 SETXQ7Z333 2677 aaKnown RBP16.98■□□□□ 0.31
ECHDC1-216ENST00000479525 OR6C74A6NCV1 312 aa16.98■□□□□ 0.31
ECHDC1-216ENST00000479525 OR51F1A6NGY5 319 aa16.98■□□□□ 0.31
ECHDC1-216ENST00000479525 NTRK1P04629 796 aa16.98■□□□□ 0.31
ECHDC1-216ENST00000479525 ATXN8OSP0DMR3 200 aa16.98■□□□□ 0.31
ECHDC1-216ENST00000479525 PTPN7P35236 360 aa16.98■□□□□ 0.31
ECHDC1-216ENST00000479525 KCNAB2Q13303 367 aa16.98■□□□□ 0.31
ECHDC1-216ENST00000479525 GSE1Q14687 1217 aa16.98■□□□□ 0.31
ECHDC1-216ENST00000479525 POU6F1Q14863 301 aa16.98■□□□□ 0.31
ECHDC1-216ENST00000479525 GPR19Q15760 415 aa16.98■□□□□ 0.31
ECHDC1-216ENST00000479525 ZRANB3Q5FWF4 1079 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms