RNA–Protein interactions for RNA: ENST00000479440.1

DDX56-210, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-210ENST00000479440 KHDC1Q4VXA5 237 aaKnown RBP15.7■□□□□ 0.1
DDX56-210ENST00000479440 AMZ2Q86W34 360 aa15.7■□□□□ 0.1
DDX56-210ENST00000479440 UBE2Q2Q8WVN8 375 aa15.7■□□□□ 0.1
DDX56-210ENST00000479440 ZNF830Q96NB3 372 aaPredicted RBP15.7■□□□□ 0.1
DDX56-210ENST00000479440 SRPK1Q96SB4 655 aaKnown RBP15.7■□□□□ 0.1
DDX56-210ENST00000479440 ZNF670Q9BS34 389 aa15.7■□□□□ 0.1
DDX56-210ENST00000479440 DHRS4Q9BTZ2 278 aa15.7■□□□□ 0.1
DDX56-210ENST00000479440 ACTR5Q9H9F9 607 aaPredicted RBP15.7■□□□□ 0.1
DDX56-210ENST00000479440 SYTL2Q9HCH5 934 aa15.7■□□□□ 0.1
DDX56-210ENST00000479440 PCMTD2Q9NV79 361 aa15.7■□□□□ 0.1
DDX56-210ENST00000479440 IP6K2Q9UHH9 426 aa15.7■□□□□ 0.1
DDX56-210ENST00000479440 ANKRD17O75179 2603 aaKnown RBP15.7■□□□□ 0.1
DDX56-210ENST00000479440 CD48P09326 243 aa15.69■□□□□ 0.1
DDX56-210ENST00000479440 PIRTP0C851 137 aa15.69■□□□□ 0.1
DDX56-210ENST00000479440 CDK11BP21127 795 aaKnown RBP15.69■□□□□ 0.1
DDX56-210ENST00000479440 SSR1P43307 286 aaKnown RBP15.69■□□□□ 0.1
DDX56-210ENST00000479440 MYL5Q02045 173 aa15.69■□□□□ 0.1
DDX56-210ENST00000479440 DPYSL3Q14195 570 aa15.69■□□□□ 0.1
DDX56-210ENST00000479440 LCN10Q6JVE6 187 aa15.69■□□□□ 0.1
DDX56-210ENST00000479440 ZNF571Q7Z3V5 609 aaPredicted RBP15.69■□□□□ 0.1
DDX56-210ENST00000479440 CCNYQ8ND76 341 aa15.69■□□□□ 0.1
DDX56-210ENST00000479440 FAM71BQ8TC56 605 aa15.69■□□□□ 0.1
DDX56-210ENST00000479440 C17orf62Q9BQA9 187 aa15.69■□□□□ 0.1
DDX56-210ENST00000479440 DPH2Q9BQC3 489 aaPredicted RBP15.69■□□□□ 0.1
DDX56-210ENST00000479440 TLR10Q9BXR5 811 aa15.69■□□□□ 0.1
DDX56-210ENST00000479440 RUBCNLQ9H714 662 aa15.69■□□□□ 0.1
DDX56-210ENST00000479440 CBX8Q9HC52 389 aa15.69■□□□□ 0.1
DDX56-210ENST00000479440 ANAPC7Q9UJX3 599 aa15.69■□□□□ 0.1
DDX56-210ENST00000479440 PSMD13Q9UNM6 376 aa15.69■□□□□ 0.1
DDX56-210ENST00000479440 CSMD1Q96PZ7 3565 aa15.69■□□□□ 0.1
DDX56-210ENST00000479440 DDX3XO00571 662 aaKnown RBP eCLIP15.68■□□□□ 0.11e-7■■■■□ 23.6
DDX56-210ENST00000479440 KRT38O76015 456 aa15.68■□□□□ 0.1
DDX56-210ENST00000479440 OTX2P32243 289 aa15.68■□□□□ 0.1
DDX56-210ENST00000479440 GLRBP48167 497 aa15.68■□□□□ 0.1
DDX56-210ENST00000479440 KPNA2P52292 529 aaKnown RBP15.68■□□□□ 0.1
DDX56-210ENST00000479440 PRKAA1Q13131 559 aa15.68■□□□□ 0.1
DDX56-210ENST00000479440 MYBPC3Q14896 1274 aa15.68■□□□□ 0.1
DDX56-210ENST00000479440 PRAMEF17Q5VTA0 474 aa15.68■□□□□ 0.1
DDX56-210ENST00000479440 FAM69BQ5VUD6 431 aa15.68■□□□□ 0.1
DDX56-210ENST00000479440 IGFL3Q6UXB1 125 aa15.68■□□□□ 0.1
DDX56-210ENST00000479440 MRGPREQ86SM8 312 aa15.68■□□□□ 0.1
DDX56-210ENST00000479440 ZADH2Q8N4Q0 377 aa15.68■□□□□ 0.1
DDX56-210ENST00000479440 ZFPM2Q8WW38 1151 aa15.68■□□□□ 0.1
DDX56-210ENST00000479440 TRIB3Q96RU7 358 aa15.68■□□□□ 0.1
DDX56-210ENST00000479440 BARD1Q99728 777 aaKnown RBP15.68■□□□□ 0.1
DDX56-210ENST00000479440 PCDHGA10Q9Y5H3 936 aa15.68■□□□□ 0.1
DDX56-210ENST00000479440 CELSR2Q9HCU4 2923 aa15.67■□□□□ 0.1
DDX56-210ENST00000479440 HEATR9A2RTY3 570 aa15.67■□□□□ 0.1
DDX56-210ENST00000479440 OR6C74A6NCV1 312 aa15.67■□□□□ 0.1
DDX56-210ENST00000479440 TMEM150CB9EJG8 249 aa15.67■□□□□ 0.1
DDX56-210ENST00000479440 MATN2O00339 956 aa15.67■□□□□ 0.1
DDX56-210ENST00000479440 PEX12O00623 359 aa15.67■□□□□ 0.1
DDX56-210ENST00000479440 MAP3K7O43318 606 aa15.67■□□□□ 0.1
DDX56-210ENST00000479440 CAPN1P07384 714 aa15.67■□□□□ 0.1
DDX56-210ENST00000479440 PRF1P14222 555 aa15.67■□□□□ 0.1
DDX56-210ENST00000479440 HLA-DPA1P20036 260 aa15.67■□□□□ 0.1
DDX56-210ENST00000479440 AGXTP21549 392 aa15.67■□□□□ 0.1
DDX56-210ENST00000479440 CDH3P22223 829 aa15.67■□□□□ 0.1
DDX56-210ENST00000479440 GJC1P36383 396 aa15.67■□□□□ 0.1
DDX56-210ENST00000479440 HADHAP40939 763 aa15.67■□□□□ 0.1
DDX56-210ENST00000479440 PRKCIP41743 596 aa15.67■□□□□ 0.1
DDX56-210ENST00000479440 IFI35P80217 286 aaPredicted RBP15.67■□□□□ 0.1
DDX56-210ENST00000479440 KLHL30Q0D2K2 578 aa15.67■□□□□ 0.1
DDX56-210ENST00000479440 ZBTB17Q13105 803 aa15.67■□□□□ 0.1
DDX56-210ENST00000479440 PTCHD3Q3KNS1 767 aa15.67■□□□□ 0.1
DDX56-210ENST00000479440 ATP13A5Q4VNC0 1218 aa15.67■□□□□ 0.1
DDX56-210ENST00000479440 ZDHHC20Q5W0Z9 365 aa15.67■□□□□ 0.1
DDX56-210ENST00000479440 HGSNATQ68CP4 663 aa15.67■□□□□ 0.1
DDX56-210ENST00000479440 GALNT16Q8N428 558 aa15.67■□□□□ 0.1
DDX56-210ENST00000479440 UNKQ9C0B0 810 aaKnown RBP15.67■□□□□ 0.1
DDX56-210ENST00000479440 ISCUQ9H1K1 167 aa15.67■□□□□ 0.1
DDX56-210ENST00000479440 KIR3DX1Q9H7L2 352 aa15.67■□□□□ 0.1
DDX56-210ENST00000479440 LRRC10BA6NIK2 292 aa15.66■□□□□ 0.1
DDX56-210ENST00000479440 E7EQ34 232 aa15.66■□□□□ 0.1
DDX56-210ENST00000479440 KCNK1O00180 336 aa15.66■□□□□ 0.1
DDX56-210ENST00000479440 POP7O75817 140 aaKnown RBP15.66■□□□□ 0.1
DDX56-210ENST00000479440 HBQ1P09105 142 aa15.66■□□□□ 0.1
DDX56-210ENST00000479440 MSL3P1P0C860 447 aa15.66■□□□□ 0.1
DDX56-210ENST00000479440 GRNP28799 593 aaKnown RBP15.66■□□□□ 0.1
DDX56-210ENST00000479440 PBLDP30039 288 aaPredicted RBP15.66■□□□□ 0.1
DDX56-210ENST00000479440 ARSEP51690 589 aa15.66■□□□□ 0.1
DDX56-210ENST00000479440 GBE1Q04446 702 aa15.66■□□□□ 0.1
DDX56-210ENST00000479440 NFE2L1Q14494 772 aa15.66■□□□□ 0.1
DDX56-210ENST00000479440 PDK2Q15119 407 aa15.66■□□□□ 0.1
DDX56-210ENST00000479440 ZRSR2Q15696 482 aaKnown RBP15.66■□□□□ 0.1
DDX56-210ENST00000479440 PCSK7Q16549 785 aa15.66■□□□□ 0.1
DDX56-210ENST00000479440 CRB2Q5IJ48 1285 aa15.66■□□□□ 0.1
DDX56-210ENST00000479440 DCAF10Q5QP82 559 aa15.66■□□□□ 0.1
DDX56-210ENST00000479440 LDLRAP1Q5SW96 308 aa15.66■□□□□ 0.1
DDX56-210ENST00000479440 CCDC70Q6NSX1 233 aa15.66■□□□□ 0.1
DDX56-210ENST00000479440 FAM83HQ6ZRV2 1179 aaPredicted RBP15.66■□□□□ 0.1
DDX56-210ENST00000479440 Q6ZS92 163 aa15.66■□□□□ 0.1
DDX56-210ENST00000479440 NT5DC3Q86UY8 548 aa15.66■□□□□ 0.1
DDX56-210ENST00000479440 MAP7D3Q8IWC1 876 aa15.66■□□□□ 0.1
DDX56-210ENST00000479440 LRRN4Q8WUT4 740 aa15.66■□□□□ 0.1
DDX56-210ENST00000479440 INPP5DQ92835 1189 aa15.66■□□□□ 0.1
DDX56-210ENST00000479440 BTBD6Q96KE9 485 aa15.66■□□□□ 0.1
DDX56-210ENST00000479440 C12orf66Q96MD2 445 aa15.66■□□□□ 0.1
DDX56-210ENST00000479440 C1GALT1Q9NS00 363 aa15.66■□□□□ 0.1
DDX56-210ENST00000479440 AIPL1Q9NZN9 384 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms