RNA–Protein interactions for RNA: ENST00000478840.1

UPF3B-203, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3B, Length 748 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-203ENST00000478840 C11orf57Q6ZUT1 292 aaPredicted RBP5.02□□□□□ -1.61
UPF3B-203ENST00000478840 Q75L30 129 aa5.02□□□□□ -1.61
UPF3B-203ENST00000478840 SLC5A8Q8N695 610 aa5.02□□□□□ -1.61
UPF3B-203ENST00000478840 NAT8LQ8N9F0 302 aa5.02□□□□□ -1.61
UPF3B-203ENST00000478840 ACVR1CQ8NER5 493 aa5.02□□□□□ -1.61
UPF3B-203ENST00000478840 OR5R1Q8NH85 324 aa5.02□□□□□ -1.61
UPF3B-203ENST00000478840 OCC1Q8TAD7 63 aa5.02□□□□□ -1.61
UPF3B-203ENST00000478840 DDB2Q92466 427 aa5.02□□□□□ -1.61
UPF3B-203ENST00000478840 PRMT6Q96LA8 375 aaPredicted RBP5.02□□□□□ -1.61
UPF3B-203ENST00000478840 INTS14Q96SY0 518 aa5.02□□□□□ -1.61
UPF3B-203ENST00000478840 SEPHS2Q99611 448 aa5.02□□□□□ -1.61
UPF3B-203ENST00000478840 NRIP3Q9NQ35 241 aa5.02□□□□□ -1.61
UPF3B-203ENST00000478840 TRNAU1APQ9NX07 287 aaKnown RBP5.02□□□□□ -1.61
UPF3B-203ENST00000478840 SNX7Q9UNH6 387 aa5.02□□□□□ -1.61
UPF3B-203ENST00000478840 KLHL20Q9Y2M5 609 aa5.02□□□□□ -1.61
UPF3B-203ENST00000478840 KNSTRNQ9Y448 316 aa5.02□□□□□ -1.61
UPF3B-203ENST00000478840 LOXL2Q9Y4K0 774 aa5.02□□□□□ -1.61
UPF3B-203ENST00000478840 LY6G6EA0A0G2JKS1 128 aa5.01□□□□□ -1.61
UPF3B-203ENST00000478840 OR2M5A3KFT3 312 aa5.01□□□□□ -1.61
UPF3B-203ENST00000478840 CLDN4O14493 209 aa5.01□□□□□ -1.61
UPF3B-203ENST00000478840 ZBTB43O43298 467 aa5.01□□□□□ -1.61
UPF3B-203ENST00000478840 OR10H2O60403 315 aa5.01□□□□□ -1.61
UPF3B-203ENST00000478840 FAM58BPP0C7Q3 252 aa5.01□□□□□ -1.61
UPF3B-203ENST00000478840 GABRA5P31644 462 aa5.01□□□□□ -1.61
UPF3B-203ENST00000478840 ASCL1P50553 236 aa5.01□□□□□ -1.61
UPF3B-203ENST00000478840 ROR2Q01974 943 aaKnown RBP5.01□□□□□ -1.61
UPF3B-203ENST00000478840 MZT1Q08AG7 82 aa5.01□□□□□ -1.61
UPF3B-203ENST00000478840 GPS2Q13227 327 aa5.01□□□□□ -1.61
UPF3B-203ENST00000478840 ANKRD20A4Q4UJ75 823 aa5.01□□□□□ -1.61
UPF3B-203ENST00000478840 ANKRD20A8PQ5CZ79 823 aa5.01□□□□□ -1.61
UPF3B-203ENST00000478840 PAPPA-AS1Q5QFB9 102 aa5.01□□□□□ -1.61
UPF3B-203ENST00000478840 ANKRD20A2Q5SQ80 823 aa5.01□□□□□ -1.61
UPF3B-203ENST00000478840 FNBP1LQ5T0N5 605 aa5.01□□□□□ -1.61
UPF3B-203ENST00000478840 ANKRD20A1Q5TYW2 823 aa5.01□□□□□ -1.61
UPF3B-203ENST00000478840 ANKRD20A3Q5VUR7 823 aa5.01□□□□□ -1.61
UPF3B-203ENST00000478840 ALS2CLQ60I27 953 aa5.01□□□□□ -1.61
UPF3B-203ENST00000478840 PRR27Q6MZM9 219 aa5.01□□□□□ -1.61
UPF3B-203ENST00000478840 ZBTB49Q6ZSB9 765 aa5.01□□□□□ -1.61
UPF3B-203ENST00000478840 RAPH1Q70E73 1250 aa5.01□□□□□ -1.61
UPF3B-203ENST00000478840 DSG4Q86SJ6 1040 aa5.01□□□□□ -1.61
UPF3B-203ENST00000478840 GPR180Q86V85 440 aa5.01□□□□□ -1.61
UPF3B-203ENST00000478840 ZSCAN30Q86W11 494 aa5.01□□□□□ -1.61
UPF3B-203ENST00000478840 SPDL1Q96EA4 605 aa5.01□□□□□ -1.61
UPF3B-203ENST00000478840 FEVQ99581 238 aa5.01□□□□□ -1.61
UPF3B-203ENST00000478840 INPP5KQ9BT40 448 aa5.01□□□□□ -1.61
UPF3B-203ENST00000478840 SCAND2PQ9GZW5 306 aaPredicted RBP5.01□□□□□ -1.61
UPF3B-203ENST00000478840 TMPRSS5Q9H3S3 457 aa5.01□□□□□ -1.61
UPF3B-203ENST00000478840 HHATLQ9HCP6 504 aa5.01□□□□□ -1.61
UPF3B-203ENST00000478840 ADPRHL2Q9NX46 363 aa5.01□□□□□ -1.61
UPF3B-203ENST00000478840 DPP3Q9NY33 737 aa5.01□□□□□ -1.61
UPF3B-203ENST00000478840 C1RLQ9NZP8 487 aa5.01□□□□□ -1.61
UPF3B-203ENST00000478840 FRMD4AQ9P2Q2 1039 aaPredicted RBP5.01□□□□□ -1.61
UPF3B-203ENST00000478840 GRIP1Q9Y3R0 1128 aa5.01□□□□□ -1.61
UPF3B-203ENST00000478840 NFS1Q9Y697 457 aa5.01□□□□□ -1.61
UPF3B-203ENST00000478840 PRAG1Q86YV5 1406 aa5□□□□□ -1.61
UPF3B-203ENST00000478840 A0A0U1RQJ8 604 aa5□□□□□ -1.61
UPF3B-203ENST00000478840 RPS10-NUDT3A0A1W2PQS6 291 aa5□□□□□ -1.61
UPF3B-203ENST00000478840 OOEPA6NGQ2 149 aa5□□□□□ -1.61
UPF3B-203ENST00000478840 PLK4O00444 970 aa5□□□□□ -1.61
UPF3B-203ENST00000478840 RFPL2O75678 378 aa5□□□□□ -1.61
UPF3B-203ENST00000478840 CAMTA2O94983 1202 aa5□□□□□ -1.61
UPF3B-203ENST00000478840 FSHBP01225 129 aa5□□□□□ -1.61
UPF3B-203ENST00000478840 OR2T7P0C7T2 308 aa5□□□□□ -1.61
UPF3B-203ENST00000478840 HOXB2P14652 356 aa5□□□□□ -1.61
UPF3B-203ENST00000478840 CYP11B2P19099 503 aa5□□□□□ -1.61
UPF3B-203ENST00000478840 LMO1P25800 156 aa5□□□□□ -1.61
UPF3B-203ENST00000478840 PRKCIP41743 596 aa5□□□□□ -1.61
UPF3B-203ENST00000478840 TROAPQ12815 778 aa5□□□□□ -1.61
UPF3B-203ENST00000478840 KRTAP15-1Q3LI76 137 aa5□□□□□ -1.61
UPF3B-203ENST00000478840 GLRA4Q5JXX5 417 aa5□□□□□ -1.61
UPF3B-203ENST00000478840 SHEQ5VZ18 495 aa5□□□□□ -1.61
UPF3B-203ENST00000478840 TYW3Q6IPR3 259 aaKnown RBP5□□□□□ -1.61
UPF3B-203ENST00000478840 C15orf39Q6ZRI6 1047 aa5□□□□□ -1.61
UPF3B-203ENST00000478840 TMEM199Q8N511 208 aa5□□□□□ -1.61
UPF3B-203ENST00000478840 C10orf53Q8N6V4 93 aa5□□□□□ -1.61
UPF3B-203ENST00000478840 ZNF548Q8NEK5 533 aaPredicted RBP5□□□□□ -1.61
UPF3B-203ENST00000478840 OR2AJ1Q8NGZ0 328 aa5□□□□□ -1.61
UPF3B-203ENST00000478840 SLC25A28Q96A46 364 aa5□□□□□ -1.61
UPF3B-203ENST00000478840 NLRP4Q96MN2 994 aa5□□□□□ -1.61
UPF3B-203ENST00000478840 CCDC43Q96MW1 224 aaKnown RBP5□□□□□ -1.61
UPF3B-203ENST00000478840 QRFPRQ96P65 431 aa5□□□□□ -1.61
UPF3B-203ENST00000478840 DPAGT1Q9H3H5 408 aa5□□□□□ -1.61
UPF3B-203ENST00000478840 STK26Q9P289 416 aa5□□□□□ -1.61
UPF3B-203ENST00000478840 RHCGQ9UBD6 479 aa5□□□□□ -1.61
UPF3B-203ENST00000478840 ACAD8Q9UKU7 415 aa5□□□□□ -1.61
UPF3B-203ENST00000478840 KCNK7Q9Y2U2 307 aa5□□□□□ -1.61
UPF3B-203ENST00000478840 PCDHAC2Q9Y5I4 1007 aa5□□□□□ -1.61
UPF3B-203ENST00000478840 PTPRCP08575 1304 aa4.99□□□□□ -1.61
UPF3B-203ENST00000478840 C5orf52A6NGY3 159 aa4.99□□□□□ -1.61
UPF3B-203ENST00000478840 XRCC3O43542 346 aa4.99□□□□□ -1.61
UPF3B-203ENST00000478840 IGHV4-30-4P0DP06 118 aa4.99□□□□□ -1.61
UPF3B-203ENST00000478840 PTPN3P26045 913 aa4.99□□□□□ -1.61
UPF3B-203ENST00000478840 ABATP80404 500 aa4.99□□□□□ -1.61
UPF3B-203ENST00000478840 UBXN1Q04323 297 aa4.99□□□□□ -1.61
UPF3B-203ENST00000478840 ITGA7Q13683 1181 aa4.99□□□□□ -1.61
UPF3B-203ENST00000478840 OASLQ15646 514 aaKnown RBP4.99□□□□□ -1.61
UPF3B-203ENST00000478840 UGCGQ16739 394 aa4.99□□□□□ -1.61
UPF3B-203ENST00000478840 CDO1Q16878 200 aa4.99□□□□□ -1.61
UPF3B-203ENST00000478840 SMU1Q2TAY7 513 aa4.99□□□□□ -1.61
UPF3B-203ENST00000478840 CCDC92Q53HC0 331 aaPredicted RBP4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms